RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 NFKBIEO00221 500 aa24.81■■□□□ 1.56
COL6A2-208ENST00000485591 POLA2Q14181 598 aa24.81■■□□□ 1.56
COL6A2-208ENST00000485591 ARHGAP27Q6ZUM4 889 aa24.81■■□□□ 1.56
COL6A2-208ENST00000485591 RPAP2Q8IXW5 612 aaPredicted RBP24.81■■□□□ 1.56
COL6A2-208ENST00000485591 SSH3Q8TE77 659 aa24.81■■□□□ 1.56
COL6A2-208ENST00000485591 COPRSQ9NQ92 184 aa24.81■■□□□ 1.56
COL6A2-208ENST00000485591 MINPP1Q9UNW1 487 aa24.81■■□□□ 1.56
COL6A2-208ENST00000485591 AAMPQ13685 434 aa24.8■■□□□ 1.56
COL6A2-208ENST00000485591 PSMD1Q99460 953 aa24.8■■□□□ 1.56
COL6A2-208ENST00000485591 CNNM1Q9NRU3 951 aa24.8■■□□□ 1.56
COL6A2-208ENST00000485591 FBXO3Q9UK99 471 aa24.8■■□□□ 1.56
COL6A2-208ENST00000485591 CHD4Q14839 1912 aa24.8■■□□□ 1.56
COL6A2-208ENST00000485591 DICER1Q9UPY3 1922 aaKnown RBP24.8■■□□□ 1.56
COL6A2-208ENST00000485591 GOLGB1Q14789 3259 aaKnown RBP24.79■■□□□ 1.56
COL6A2-208ENST00000485591 GPSM2P81274 684 aa24.79■■□□□ 1.56
COL6A2-208ENST00000485591 FKBP4Q02790 459 aaKnown RBP eCLIP24.79■■□□□ 1.56
COL6A2-208ENST00000485591 MPNDQ8N594 471 aa24.79■■□□□ 1.56
COL6A2-208ENST00000485591 PUS3Q9BZE2 481 aaKnown RBP24.79■■□□□ 1.56
COL6A2-208ENST00000485591 TAOK3Q9H2K8 898 aa24.79■■□□□ 1.56
COL6A2-208ENST00000485591 PODXL2Q9NZ53 605 aa24.79■■□□□ 1.56
COL6A2-208ENST00000485591 XDHP47989 1333 aa24.79■■□□□ 1.56
COL6A2-208ENST00000485591 EYA2O00167 538 aa24.78■■□□□ 1.56
COL6A2-208ENST00000485591 DPP8Q6V1X1 898 aaPredicted RBP24.78■■□□□ 1.56
COL6A2-208ENST00000485591 NSFL1CQ9UNZ2 370 aaKnown RBP24.78■■□□□ 1.56
COL6A2-208ENST00000485591 RIPOR2Q9Y4F9 1068 aa24.78■■□□□ 1.56
COL6A2-208ENST00000485591 CIAO1O76071 339 aa24.77■■□□□ 1.56
COL6A2-208ENST00000485591 RASSF7Q02833 373 aa24.77■■□□□ 1.56
COL6A2-208ENST00000485591 CHRNDQ07001 517 aa24.77■■□□□ 1.56
COL6A2-208ENST00000485591 LRRC24Q50LG9 513 aa24.77■■□□□ 1.56
COL6A2-208ENST00000485591 EXOC6Q8TAG9 804 aa24.77■■□□□ 1.56
COL6A2-208ENST00000485591 RTFDC1Q9BY42 306 aaPredicted RBP24.77■■□□□ 1.56
COL6A2-208ENST00000485591 ANKRD2Q9GZV1 360 aa24.77■■□□□ 1.56
COL6A2-208ENST00000485591 PA2G4Q9UQ80 394 aaKnown RBP24.77■■□□□ 1.56
COL6A2-208ENST00000485591 TIAM2Q8IVF5 1701 aa24.76■■□□□ 1.55
COL6A2-208ENST00000485591 IRX6P78412 446 aaPredicted RBP24.76■■□□□ 1.55
COL6A2-208ENST00000485591 ANKIB1Q9P2G1 1089 aa24.76■■□□□ 1.55
COL6A2-208ENST00000485591 MROH5Q6ZUA9 1318 aa24.76■■□□□ 1.55
COL6A2-208ENST00000485591 HMMRO75330 724 aa24.75■■□□□ 1.55
COL6A2-208ENST00000485591 SIRT2Q8IXJ6 389 aa24.75■■□□□ 1.55
COL6A2-208ENST00000485591 SUPT20HQ8NEM7 779 aa24.75■■□□□ 1.55
COL6A2-208ENST00000485591 SIL1Q9H173 461 aa24.75■■□□□ 1.55
COL6A2-208ENST00000485591 ATG9AQ7Z3C6 839 aa24.74■■□□□ 1.55
COL6A2-208ENST00000485591 TBC1D16Q8TBP0 767 aa24.74■■□□□ 1.55
COL6A2-208ENST00000485591 GGA1Q9UJY5 639 aa24.74■■□□□ 1.55
COL6A2-208ENST00000485591 ATP2B4P23634 1241 aa24.73■■□□□ 1.55
COL6A2-208ENST00000485591 IL15P40933 162 aaPredicted RBP24.73■■□□□ 1.55
COL6A2-208ENST00000485591 POLLQ9UGP5 575 aa24.73■■□□□ 1.55
COL6A2-208ENST00000485591 UFL1O94874 794 aa24.72■■□□□ 1.55
COL6A2-208ENST00000485591 PRELPP51888 382 aa24.72■■□□□ 1.55
COL6A2-208ENST00000485591 METTL24Q5JXM2 366 aa24.72■■□□□ 1.55
COL6A2-208ENST00000485591 VGLL2Q8N8G2 317 aa24.72■■□□□ 1.55
COL6A2-208ENST00000485591 VPS33BQ9H267 617 aa24.72■■□□□ 1.55
COL6A2-208ENST00000485591 LEMD3Q9Y2U8 911 aa24.72■■□□□ 1.55
COL6A2-208ENST00000485591 NOP58Q9Y2X3 529 aaKnown RBP24.72■■□□□ 1.55
COL6A2-208ENST00000485591 PCDHB15Q9Y5E8 787 aa24.72■■□□□ 1.55
COL6A2-208ENST00000485591 LMNB1P20700 586 aa24.71■■□□□ 1.55
COL6A2-208ENST00000485591 HELBQ8NG08 1087 aaPredicted RBP24.71■■□□□ 1.55
COL6A2-208ENST00000485591 ZNF277Q9NRM2 450 aaPredicted RBP24.71■■□□□ 1.55
COL6A2-208ENST00000485591 ARAP2Q8WZ64 1704 aa24.71■■□□□ 1.55
COL6A2-208ENST00000485591 C6orf229H3BNL8 230 aa24.7■■□□□ 1.54
COL6A2-208ENST00000485591 TAF5LO75529 589 aa24.7■■□□□ 1.54
COL6A2-208ENST00000485591 IARSP41252 1262 aaKnown RBP24.7■■□□□ 1.54
COL6A2-208ENST00000485591 EYA3Q99504 573 aa24.7■■□□□ 1.54
COL6A2-208ENST00000485591 MED23Q9ULK4 1368 aa24.69■■□□□ 1.54
COL6A2-208ENST00000485591 COL4A5P29400 1685 aa24.69■■□□□ 1.54
COL6A2-208ENST00000485591 ZNF804BA4D1E1 1349 aa24.69■■□□□ 1.54
COL6A2-208ENST00000485591 SURF6O75683 361 aaKnown RBP24.69■■□□□ 1.54
COL6A2-208ENST00000485591 PDE8BO95263 885 aa24.69■■□□□ 1.54
COL6A2-208ENST00000485591 G3BP1Q13283 466 aaKnown RBP eCLIP24.69■■□□□ 1.54
COL6A2-208ENST00000485591 KCNJ4P48050 445 aa24.68■■□□□ 1.54
COL6A2-208ENST00000485591 KIAA2012Q0VF49 1180 aa24.68■■□□□ 1.54
COL6A2-208ENST00000485591 WTIPA6NIX2 430 aaPredicted RBP24.67■■□□□ 1.54
COL6A2-208ENST00000485591 PPIP5K2O43314 1243 aa24.67■■□□□ 1.54
COL6A2-208ENST00000485591 UBE4AQ14139 1066 aa24.67■■□□□ 1.54
COL6A2-208ENST00000485591 AOC3Q16853 763 aa24.67■■□□□ 1.54
COL6A2-208ENST00000485591 WASHC4Q2M389 1173 aa24.67■■□□□ 1.54
COL6A2-208ENST00000485591 GPR101Q96P66 508 aaPredicted RBP24.67■■□□□ 1.54
COL6A2-208ENST00000485591 RNF181Q9P0P0 153 aa24.67■■□□□ 1.54
COL6A2-208ENST00000485591 CEP126Q9P2H0 1117 aa24.67■■□□□ 1.54
COL6A2-208ENST00000485591 HSP90AB4PQ58FF6 505 aa24.66■■□□□ 1.54
COL6A2-208ENST00000485591 C9orf131Q5VYM1 1079 aa24.66■■□□□ 1.54
COL6A2-208ENST00000485591 IRS2Q9Y4H2 1338 aa24.65■■□□□ 1.54
COL6A2-208ENST00000485591 OS9Q13438 667 aaPredicted RBP24.65■■□□□ 1.54
COL6A2-208ENST00000485591 PUM3Q15397 648 aaKnown RBP24.65■■□□□ 1.54
COL6A2-208ENST00000485591 C15orf52Q6ZUT6 534 aaKnown RBP24.65■■□□□ 1.54
COL6A2-208ENST00000485591 LARGE2Q8N3Y3 721 aa24.65■■□□□ 1.54
COL6A2-208ENST00000485591 EXOC6BQ9Y2D4 811 aa24.65■■□□□ 1.54
COL6A2-208ENST00000485591 UTRNP46939 3433 aa24.64■■□□□ 1.54
COL6A2-208ENST00000485591 PSME4Q14997 1843 aa24.64■■□□□ 1.54
COL6A2-208ENST00000485591 SNAP23O00161 211 aa24.64■■□□□ 1.54
COL6A2-208ENST00000485591 SASH1O94885 1247 aa24.64■■□□□ 1.54
COL6A2-208ENST00000485591 FGFR2P21802 821 aa24.64■■□□□ 1.54
COL6A2-208ENST00000485591 TFCP2Q12800 502 aa24.64■■□□□ 1.54
COL6A2-208ENST00000485591 ZC3H12CQ9C0D7 883 aaKnown RBP24.64■■□□□ 1.54
COL6A2-208ENST00000485591 ZNF609O15014 1411 aa24.63■■□□□ 1.53
COL6A2-208ENST00000485591 RIMBP2O15034 1052 aa24.63■■□□□ 1.53
COL6A2-208ENST00000485591 ERC1Q8IUD2 1116 aa24.63■■□□□ 1.53
COL6A2-208ENST00000485591 ZC3H4Q9UPT8 1303 aaKnown RBP24.62■■□□□ 1.53
COL6A2-208ENST00000485591 NEFLP07196 543 aa24.62■■□□□ 1.53
COL6A2-208ENST00000485591 KLRK1P26718 216 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms