RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 COL4A5P29400 1685 aa14.86□□□□□ -0.03
APTX-227ENST00000485479 DPP8Q6V1X1 898 aaPredicted RBP14.85□□□□□ -0.03
APTX-227ENST00000485479 RNF181Q9P0P0 153 aa14.85□□□□□ -0.03
APTX-227ENST00000485479 MINPP1Q9UNW1 487 aa14.85□□□□□ -0.03
APTX-227ENST00000485479 MS4A1P11836 297 aa14.85□□□□□ -0.03
APTX-227ENST00000485479 RFX5P48382 616 aaPredicted RBP14.85□□□□□ -0.03
APTX-227ENST00000485479 C9orf131Q5VYM1 1079 aa14.85□□□□□ -0.03
APTX-227ENST00000485479 LDHAL6AQ6ZMR3 332 aa14.85□□□□□ -0.03
APTX-227ENST00000485479 MPNDQ8N594 471 aa14.85□□□□□ -0.03
APTX-227ENST00000485479 BSDC1Q9NW68 430 aaPredicted RBP14.85□□□□□ -0.03
APTX-227ENST00000485479 POLLQ9UGP5 575 aa14.85□□□□□ -0.03
APTX-227ENST00000485479 DDX19BQ9UMR2 479 aa14.85□□□□□ -0.03
APTX-227ENST00000485479 CHD4Q14839 1912 aa14.85□□□□□ -0.03
APTX-227ENST00000485479 LTBP1Q14766 1721 aa14.84□□□□□ -0.03
APTX-227ENST00000485479 CHRNDQ07001 517 aa14.84□□□□□ -0.03
APTX-227ENST00000485479 AOC3Q16853 763 aa14.84□□□□□ -0.03
APTX-227ENST00000485479 CNNM1Q9NRU3 951 aa14.84□□□□□ -0.03
APTX-227ENST00000485479 A0A1B0GUL6 1792 aa14.84□□□□□ -0.03
APTX-227ENST00000485479 C6orf229H3BNL8 230 aa14.84□□□□□ -0.03
APTX-227ENST00000485479 RIMBP2O15034 1052 aa14.84□□□□□ -0.03
APTX-227ENST00000485479 UFL1O94874 794 aa14.84□□□□□ -0.03
APTX-227ENST00000485479 KLRK1P26718 216 aa14.84□□□□□ -0.03
APTX-227ENST00000485479 FKBP4Q02790 459 aaKnown RBP eCLIP14.84□□□□□ -0.03
APTX-227ENST00000485479 PTPN12Q05209 780 aaKnown RBP14.84□□□□□ -0.03
APTX-227ENST00000485479 TMX4Q9H1E5 349 aaPredicted RBP14.84□□□□□ -0.03
APTX-227ENST00000485479 ZBTB40Q9NUA8 1239 aa14.84□□□□□ -0.03
APTX-227ENST00000485479 SOGA3Q5TF21 947 aa14.83□□□□□ -0.04
APTX-227ENST00000485479 RTKN2Q8IZC4 609 aa14.83□□□□□ -0.04
APTX-227ENST00000485479 TIAM2Q8IVF5 1701 aa14.83□□□□□ -0.04
APTX-227ENST00000485479 CEP85Q6P2H3 762 aa14.82□□□□□ -0.04
APTX-227ENST00000485479 TBC1D16Q8TBP0 767 aa14.82□□□□□ -0.04
APTX-227ENST00000485479 ZNF526Q8TF50 670 aaPredicted RBP14.82□□□□□ -0.04
APTX-227ENST00000485479 BCL11AQ9H165 835 aa14.82□□□□□ -0.04
APTX-227ENST00000485479 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.82□□□□□ -0.04
APTX-227ENST00000485479 PPIP5K2O43314 1243 aa14.81□□□□□ -0.04
APTX-227ENST00000485479 LMNB1P20700 586 aa14.81□□□□□ -0.04
APTX-227ENST00000485479 TXNRD3Q86VQ6 643 aa14.81□□□□□ -0.04
APTX-227ENST00000485479 XDHP47989 1333 aa14.8□□□□□ -0.04
APTX-227ENST00000485479 IARSP41252 1262 aaKnown RBP14.8□□□□□ -0.04
APTX-227ENST00000485479 TMC4Q7Z404 712 aa14.8□□□□□ -0.04
APTX-227ENST00000485479 SIRT2Q8IXJ6 389 aa14.8□□□□□ -0.04
APTX-227ENST00000485479 EXOC6Q8TAG9 804 aa14.8□□□□□ -0.04
APTX-227ENST00000485479 PSMD1Q99460 953 aa14.8□□□□□ -0.04
APTX-227ENST00000485479 DBNDD1Q9H9R9 158 aa14.8□□□□□ -0.04
APTX-227ENST00000485479 GGA1Q9UJY5 639 aa14.8□□□□□ -0.04
APTX-227ENST00000485479 DOK7Q18PE1 504 aa14.8□□□□□ -0.04
APTX-227ENST00000485479 CC2D2BQ6DHV5 1058 aa14.8□□□□□ -0.04
APTX-227ENST00000485479 ATG9AQ7Z3C6 839 aa14.8□□□□□ -0.04
APTX-227ENST00000485479 LARGE2Q8N3Y3 721 aa14.8□□□□□ -0.04
APTX-227ENST00000485479 RIPOR2Q9Y4F9 1068 aa14.8□□□□□ -0.04
APTX-227ENST00000485479 MTX1Q13505 466 aa14.79□□□□□ -0.04
APTX-227ENST00000485479 WASHC4Q2M389 1173 aa14.79□□□□□ -0.04
APTX-227ENST00000485479 METTL24Q5JXM2 366 aa14.79□□□□□ -0.04
APTX-227ENST00000485479 LTBP3Q9NS15 1303 aa14.78□□□□□ -0.04
APTX-227ENST00000485479 APBB1O00213 710 aa14.78□□□□□ -0.04
APTX-227ENST00000485479 YY1P25490 414 aa14.78□□□□□ -0.04
APTX-227ENST00000485479 ATP8B2P98198 1209 aa14.78□□□□□ -0.04
APTX-227ENST00000485479 RTFDC1Q9BY42 306 aaPredicted RBP14.78□□□□□ -0.04
APTX-227ENST00000485479 HDAC5Q9UQL6 1122 aa14.78□□□□□ -0.04
APTX-227ENST00000485479 DICER1Q9UPY3 1922 aaKnown RBP14.78□□□□□ -0.04
APTX-227ENST00000485479 EYA2O00167 538 aa14.78□□□□□ -0.04
APTX-227ENST00000485479 KCNJ4P48050 445 aa14.78□□□□□ -0.04
APTX-227ENST00000485479 KCNQ5Q9NR82 932 aa14.78□□□□□ -0.04
APTX-227ENST00000485479 PODXL2Q9NZ53 605 aa14.78□□□□□ -0.04
APTX-227ENST00000485479 EXOC6BQ9Y2D4 811 aa14.78□□□□□ -0.04
APTX-227ENST00000485479 ZNF804BA4D1E1 1349 aa14.77□□□□□ -0.04
APTX-227ENST00000485479 ZNF541Q9H0D2 1346 aa14.77□□□□□ -0.04
APTX-227ENST00000485479 POLA2Q14181 598 aa14.77□□□□□ -0.04
APTX-227ENST00000485479 PCDHB15Q9Y5E8 787 aa14.77□□□□□ -0.04
APTX-227ENST00000485479 KIAA2012Q0VF49 1180 aa14.76□□□□□ -0.05
APTX-227ENST00000485479 VGLL2Q8N8G2 317 aa14.76□□□□□ -0.05
APTX-227ENST00000485479 SSH3Q8TE77 659 aa14.76□□□□□ -0.05
APTX-227ENST00000485479 COPRSQ9NQ92 184 aa14.76□□□□□ -0.05
APTX-227ENST00000485479 SURF6O75683 361 aaKnown RBP14.76□□□□□ -0.05
APTX-227ENST00000485479 SCN9AQ15858 1988 aa14.75□□□□□ -0.05
APTX-227ENST00000485479 YDJCA8MPS7 323 aa14.75□□□□□ -0.05
APTX-227ENST00000485479 ATP2B4P23634 1241 aa14.75□□□□□ -0.05
APTX-227ENST00000485479 TFCP2Q12800 502 aa14.75□□□□□ -0.05
APTX-227ENST00000485479 JDP2Q8WYK2 163 aa14.75□□□□□ -0.05
APTX-227ENST00000485479 ZC3H12CQ9C0D7 883 aaKnown RBP14.75□□□□□ -0.05
APTX-227ENST00000485479 ANKRD2Q9GZV1 360 aa14.75□□□□□ -0.05
APTX-227ENST00000485479 JAG2Q9Y219 1238 aa14.75□□□□□ -0.05
APTX-227ENST00000485479 MROH5Q6ZUA9 1318 aa14.75□□□□□ -0.05
APTX-227ENST00000485479 ECE2O60344 883 aa14.74□□□□□ -0.05
APTX-227ENST00000485479 RAD17O75943 681 aa14.74□□□□□ -0.05
APTX-227ENST00000485479 PDE8BO95263 885 aa14.74□□□□□ -0.05
APTX-227ENST00000485479 GYG1P46976 350 aa14.74□□□□□ -0.05
APTX-227ENST00000485479 OS9Q13438 667 aaPredicted RBP14.74□□□□□ -0.05
APTX-227ENST00000485479 NIM1KQ8IY84 436 aa14.74□□□□□ -0.05
APTX-227ENST00000485479 SUPT20HQ8NEM7 779 aa14.74□□□□□ -0.05
APTX-227ENST00000485479 IQSEC3Q9UPP2 1182 aaPredicted RBP14.74□□□□□ -0.05
APTX-227ENST00000485479 DDNO94850 711 aaPredicted RBP14.74□□□□□ -0.05
APTX-227ENST00000485479 SASH1O94885 1247 aa14.74□□□□□ -0.05
APTX-227ENST00000485479 EYA3Q99504 573 aa14.73□□□□□ -0.05
APTX-227ENST00000485479 GJA3Q9Y6H8 435 aa14.73□□□□□ -0.05
APTX-227ENST00000485479 IRS2Q9Y4H2 1338 aa14.73□□□□□ -0.05
APTX-227ENST00000485479 MED23Q9ULK4 1368 aa14.73□□□□□ -0.05
APTX-227ENST00000485479 G3V3G9 751 aa14.73□□□□□ -0.05
APTX-227ENST00000485479 CIAO1O76071 339 aa14.73□□□□□ -0.05
APTX-227ENST00000485479 G3BP1Q13283 466 aaKnown RBP eCLIP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms