RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 TSR2Q969E8 191 aaKnown RBP24.82■■□□□ 1.56
COL27A1-205ENST00000485397 PDE8AO60658 829 aa24.81■■□□□ 1.56
COL27A1-205ENST00000485397 DDX58O95786 925 aaKnown RBP24.81■■□□□ 1.56
COL27A1-205ENST00000485397 HSP90B1P14625 803 aaKnown RBP24.81■■□□□ 1.56
COL27A1-205ENST00000485397 CDC37L1Q7L3B6 337 aa24.81■■□□□ 1.56
COL27A1-205ENST00000485397 ZNF408Q9H9D4 720 aa24.81■■□□□ 1.56
COL27A1-205ENST00000485397 MAP3K2Q9Y2U5 619 aa24.81■■□□□ 1.56
COL27A1-205ENST00000485397 RTL9Q8NET4 1388 aa24.8■■□□□ 1.56
COL27A1-205ENST00000485397 CCDC152Q4G0S7 254 aa24.8■■□□□ 1.56
COL27A1-205ENST00000485397 SAPCD2Q86UD0 394 aa24.8■■□□□ 1.56
COL27A1-205ENST00000485397 PODXL2Q9NZ53 605 aa24.8■■□□□ 1.56
COL27A1-205ENST00000485397 AOC2O75106 756 aa24.79■■□□□ 1.56
COL27A1-205ENST00000485397 EGFRP00533 1210 aa24.79■■□□□ 1.56
COL27A1-205ENST00000485397 TBC1D10BQ4KMP7 808 aaPredicted RBP24.79■■□□□ 1.56
COL27A1-205ENST00000485397 DLK2Q6UY11 383 aa24.79■■□□□ 1.56
COL27A1-205ENST00000485397 USP48Q86UV5 1035 aa24.79■■□□□ 1.56
COL27A1-205ENST00000485397 ZC3H12CQ9C0D7 883 aaKnown RBP24.79■■□□□ 1.56
COL27A1-205ENST00000485397 UFL1O94874 794 aa24.78■■□□□ 1.56
COL27A1-205ENST00000485397 RBM26Q5T8P6 1007 aaKnown RBP24.78■■□□□ 1.56
COL27A1-205ENST00000485397 KSR2Q6VAB6 950 aa24.78■■□□□ 1.56
COL27A1-205ENST00000485397 CHMP4AQ9BY43 222 aa24.78■■□□□ 1.56
COL27A1-205ENST00000485397 ANKIB1Q9P2G1 1089 aa24.78■■□□□ 1.56
COL27A1-205ENST00000485397 PI4KAP2A4QPH2 592 aa24.77■■□□□ 1.56
COL27A1-205ENST00000485397 IGKV5-2P06315 115 aa24.77■■□□□ 1.56
COL27A1-205ENST00000485397 PI4KAP1Q8N8J0 262 aa24.77■■□□□ 1.56
COL27A1-205ENST00000485397 GGA1Q9UJY5 639 aa24.77■■□□□ 1.56
COL27A1-205ENST00000485397 THSD7BQ9C0I4 1608 aa24.76■■□□□ 1.55
COL27A1-205ENST00000485397 RPS12P25398 132 aaKnown RBP24.76■■□□□ 1.55
COL27A1-205ENST00000485397 CCDC27Q2M243 656 aa24.75■■□□□ 1.55
COL27A1-205ENST00000485397 WWC1Q8IX03 1113 aa24.75■■□□□ 1.55
COL27A1-205ENST00000485397 G3V3G9 751 aa24.74■■□□□ 1.55
COL27A1-205ENST00000485397 VIL1P09327 827 aaKnown RBP24.74■■□□□ 1.55
COL27A1-205ENST00000485397 MAP2K2P36507 400 aa24.74■■□□□ 1.55
COL27A1-205ENST00000485397 DCAF8Q5TAQ9 597 aa24.74■■□□□ 1.55
COL27A1-205ENST00000485397 G2E3Q7L622 706 aa24.74■■□□□ 1.55
COL27A1-205ENST00000485397 ANKRD18AQ8IVF6 992 aa24.74■■□□□ 1.55
COL27A1-205ENST00000485397 BEGAINQ9BUH8 593 aa24.74■■□□□ 1.55
COL27A1-205ENST00000485397 STK31Q9BXU1 1019 aa24.74■■□□□ 1.55
COL27A1-205ENST00000485397 TWISTNBQ3B726 338 aaPredicted RBP24.73■■□□□ 1.55
COL27A1-205ENST00000485397 HHIPL1Q96JK4 782 aa24.73■■□□□ 1.55
COL27A1-205ENST00000485397 SCN9AQ15858 1988 aa24.73■■□□□ 1.55
COL27A1-205ENST00000485397 CTSWP56202 376 aa24.72■■□□□ 1.55
COL27A1-205ENST00000485397 CWF19L2Q2TBE0 894 aaKnown RBP24.72■■□□□ 1.55
COL27A1-205ENST00000485397 KRT26Q7Z3Y9 468 aa24.72■■□□□ 1.55
COL27A1-205ENST00000485397 TSKSQ9UJT2 592 aa24.72■■□□□ 1.55
COL27A1-205ENST00000485397 XDHP47989 1333 aa24.71■■□□□ 1.55
COL27A1-205ENST00000485397 ADM5C9JUS6 153 aa24.71■■□□□ 1.55
COL27A1-205ENST00000485397 KIF4BQ2VIQ3 1234 aa24.71■■□□□ 1.55
COL27A1-205ENST00000485397 TTLL11Q8NHH1 800 aa24.71■■□□□ 1.55
COL27A1-205ENST00000485397 SLC4A2P04920 1241 aa24.7■■□□□ 1.54
COL27A1-205ENST00000485397 NEXNQ0ZGT2 675 aa24.7■■□□□ 1.54
COL27A1-205ENST00000485397 DCPSQ96C86 337 aaKnown RBP24.7■■□□□ 1.54
COL27A1-205ENST00000485397 GREM2Q9H772 168 aa24.7■■□□□ 1.54
COL27A1-205ENST00000485397 WTIPA6NIX2 430 aaPredicted RBP24.69■■□□□ 1.54
COL27A1-205ENST00000485397 NEURL1BA8MQ27 555 aa24.69■■□□□ 1.54
COL27A1-205ENST00000485397 ATP2B4P23634 1241 aa24.69■■□□□ 1.54
COL27A1-205ENST00000485397 HUNKP57058 714 aa24.69■■□□□ 1.54
COL27A1-205ENST00000485397 CDC5LQ99459 802 aaKnown RBP24.69■■□□□ 1.54
COL27A1-205ENST00000485397 ASTN2O75129 1339 aaPredicted RBP24.68■■□□□ 1.54
COL27A1-205ENST00000485397 RSBN1LQ6PCB5 846 aaPredicted RBP24.68■■□□□ 1.54
COL27A1-205ENST00000485397 POLR2AP24928 1970 aaKnown RBP24.67■■□□□ 1.54
COL27A1-205ENST00000485397 IL16Q14005 1332 aa24.67■■□□□ 1.54
COL27A1-205ENST00000485397 H7C1W4 665 aa24.67■■□□□ 1.54
COL27A1-205ENST00000485397 ZIC5Q96T25 663 aa24.67■■□□□ 1.54
COL27A1-205ENST00000485397 MRS2Q9HD23 443 aa24.67■■□□□ 1.54
COL27A1-205ENST00000485397 MINPP1Q9UNW1 487 aa24.67■■□□□ 1.54
COL27A1-205ENST00000485397 UBE3BQ7Z3V4 1068 aa24.66■■□□□ 1.54
COL27A1-205ENST00000485397 AGBL3Q8NEM8 1001 aa24.66■■□□□ 1.54
COL27A1-205ENST00000485397 GBA2Q9HCG7 927 aaPredicted RBP24.66■■□□□ 1.54
COL27A1-205ENST00000485397 BSDC1Q9NW68 430 aaPredicted RBP24.66■■□□□ 1.54
COL27A1-205ENST00000485397 GGA3Q9NZ52 723 aa24.66■■□□□ 1.54
COL27A1-205ENST00000485397 SALL2Q9Y467 1007 aaPredicted RBP24.66■■□□□ 1.54
COL27A1-205ENST00000485397 BRPF1P55201 1214 aaPredicted RBP24.65■■□□□ 1.54
COL27A1-205ENST00000485397 ZNF280AP59817 542 aaPredicted RBP24.65■■□□□ 1.54
COL27A1-205ENST00000485397 ABHD8Q96I13 439 aa24.65■■□□□ 1.54
COL27A1-205ENST00000485397 FLIIQ13045 1269 aa24.64■■□□□ 1.54
COL27A1-205ENST00000485397 PODNQ7Z5L7 613 aa24.64■■□□□ 1.54
COL27A1-205ENST00000485397 C2orf69Q8N8R5 385 aa24.64■■□□□ 1.54
COL27A1-205ENST00000485397 GMLQ99445 158 aa24.64■■□□□ 1.54
COL27A1-205ENST00000485397 FANCIQ9NVI1 1328 aa24.63■■□□□ 1.53
COL27A1-205ENST00000485397 USP17L3A6NCW0 530 aa24.63■■□□□ 1.53
COL27A1-205ENST00000485397 USP17L4A6NCW7 530 aa24.63■■□□□ 1.53
COL27A1-205ENST00000485397 NOGQ13253 232 aa24.63■■□□□ 1.53
COL27A1-205ENST00000485397 SCARF1Q14162 830 aa24.63■■□□□ 1.53
COL27A1-205ENST00000485397 GCKRQ14397 625 aa24.63■■□□□ 1.53
COL27A1-205ENST00000485397 NCBP3Q53F19 620 aaKnown RBP24.63■■□□□ 1.53
COL27A1-205ENST00000485397 RGMBQ6NW40 437 aa24.63■■□□□ 1.53
COL27A1-205ENST00000485397 USP17L1Q7RTZ2 530 aa24.63■■□□□ 1.53
COL27A1-205ENST00000485397 SULF1Q8IWU6 871 aa24.63■■□□□ 1.53
COL27A1-205ENST00000485397 ZNF609O15014 1411 aa24.62■■□□□ 1.53
COL27A1-205ENST00000485397 CCT4P50991 539 aaKnown RBP24.62■■□□□ 1.53
COL27A1-205ENST00000485397 ANGEL2Q5VTE6 544 aaKnown RBP24.62■■□□□ 1.53
COL27A1-205ENST00000485397 CA12O43570 354 aa24.61■■□□□ 1.53
COL27A1-205ENST00000485397 USP17L8P0C7I0 530 aa24.61■■□□□ 1.53
COL27A1-205ENST00000485397 CASP7P55210 303 aa24.61■■□□□ 1.53
COL27A1-205ENST00000485397 FKBP5Q13451 457 aaPredicted RBP24.61■■□□□ 1.53
COL27A1-205ENST00000485397 DNAAF4Q8WXU2 420 aa24.61■■□□□ 1.53
COL27A1-205ENST00000485397 PLA2G12BQ9BX93 195 aa24.61■■□□□ 1.53
COL27A1-205ENST00000485397 MED23Q9ULK4 1368 aa24.61■■□□□ 1.53
COL27A1-205ENST00000485397 FAM155AB1AL88 458 aaPredicted RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms