RNA–Protein interactions for RNA: ENST00000485120.1

PKD1-218, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 696 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-218ENST00000485120 YBX3P16989 372 aaKnown RBP eCLIP25.31■■□□□ 1.64
PKD1-218ENST00000485120 G3BP1Q13283 466 aaKnown RBP eCLIP25.31■■□□□ 1.64
PKD1-218ENST00000485120 PELP1Q8IZL8 1130 aaKnown RBP25.31■■□□□ 1.64
PKD1-218ENST00000485120 MPNDQ8N594 471 aa25.31■■□□□ 1.64
PKD1-218ENST00000485120 KLHDC4Q8TBB5 520 aa25.31■■□□□ 1.64
PKD1-218ENST00000485120 PSMD1Q99460 953 aa25.31■■□□□ 1.64
PKD1-218ENST00000485120 WWC3Q9ULE0 1092 aa25.31■■□□□ 1.64
PKD1-218ENST00000485120 CHRNDQ07001 517 aa25.3■■□□□ 1.64
PKD1-218ENST00000485120 ERICH6BQ5W0A0 696 aa25.3■■□□□ 1.64
PKD1-218ENST00000485120 SUPT20HQ8NEM7 779 aa25.3■■□□□ 1.64
PKD1-218ENST00000485120 RTFDC1Q9BY42 306 aaPredicted RBP25.3■■□□□ 1.64
PKD1-218ENST00000485120 VPS33BQ9H267 617 aa25.3■■□□□ 1.64
PKD1-218ENST00000485120 ZNF219Q9P2Y4 722 aaPredicted RBP25.3■■□□□ 1.64
PKD1-218ENST00000485120 LEMD3Q9Y2U8 911 aa25.3■■□□□ 1.64
PKD1-218ENST00000485120 XDHP47989 1333 aa25.3■■□□□ 1.64
PKD1-218ENST00000485120 SURF6O75683 361 aaKnown RBP25.29■■□□□ 1.64
PKD1-218ENST00000485120 ATP2B4P23634 1241 aa25.29■■□□□ 1.64
PKD1-218ENST00000485120 LRRC24Q50LG9 513 aa25.29■■□□□ 1.64
PKD1-218ENST00000485120 DPP8Q6V1X1 898 aaPredicted RBP25.29■■□□□ 1.64
PKD1-218ENST00000485120 PUS3Q9BZE2 481 aaKnown RBP25.29■■□□□ 1.64
PKD1-218ENST00000485120 ANKIB1Q9P2G1 1089 aa25.29■■□□□ 1.64
PKD1-218ENST00000485120 NSFL1CQ9UNZ2 370 aaKnown RBP25.29■■□□□ 1.64
PKD1-218ENST00000485120 PA2G4Q9UQ80 394 aaKnown RBP25.29■■□□□ 1.64
PKD1-218ENST00000485120 LTBP3Q9NS15 1303 aa25.29■■□□□ 1.64
PKD1-218ENST00000485120 FKBP4Q02790 459 aaKnown RBP eCLIP25.28■■□□□ 1.64
PKD1-218ENST00000485120 HDAC1Q13547 482 aaPredicted RBP25.28■■□□□ 1.64
PKD1-218ENST00000485120 ATG9AQ7Z3C6 839 aa25.28■■□□□ 1.64
PKD1-218ENST00000485120 GPSM2P81274 684 aa25.27■■□□□ 1.64
PKD1-218ENST00000485120 METTL24Q5JXM2 366 aa25.27■■□□□ 1.64
PKD1-218ENST00000485120 ARHGAP27Q6ZUM4 889 aa25.27■■□□□ 1.64
PKD1-218ENST00000485120 ERC1Q8IUD2 1116 aa25.27■■□□□ 1.64
PKD1-218ENST00000485120 CEP126Q9P2H0 1117 aa25.27■■□□□ 1.64
PKD1-218ENST00000485120 GGA1Q9UJY5 639 aa25.27■■□□□ 1.64
PKD1-218ENST00000485120 SLX4Q8IY92 1834 aa25.26■■□□□ 1.63
PKD1-218ENST00000485120 BRCA1P38398 1863 aaKnown RBP25.26■■□□□ 1.63
PKD1-218ENST00000485120 RAB11FIP3O75154 756 aa25.26■■□□□ 1.63
PKD1-218ENST00000485120 OLFM4Q6UX06 510 aa25.26■■□□□ 1.63
PKD1-218ENST00000485120 SIL1Q9H173 461 aa25.26■■□□□ 1.63
PKD1-218ENST00000485120 TAOK3Q9H2K8 898 aa25.26■■□□□ 1.63
PKD1-218ENST00000485120 RWDD1Q9H446 243 aaPredicted RBP25.26■■□□□ 1.63
PKD1-218ENST00000485120 SNED1Q8TER0 1413 aa25.26■■□□□ 1.63
PKD1-218ENST00000485120 PDE8BO95263 885 aa25.25■■□□□ 1.63
PKD1-218ENST00000485120 UBE4AQ14139 1066 aa25.25■■□□□ 1.63
PKD1-218ENST00000485120 EYA3Q99504 573 aa25.25■■□□□ 1.63
PKD1-218ENST00000485120 DCTPP1Q9H773 170 aa25.25■■□□□ 1.63
PKD1-218ENST00000485120 VGLL2Q8N8G2 317 aa25.24■■□□□ 1.63
PKD1-218ENST00000485120 TBC1D16Q8TBP0 767 aa25.24■■□□□ 1.63
PKD1-218ENST00000485120 NFKBIEO00221 500 aa25.23■■□□□ 1.63
PKD1-218ENST00000485120 OS9Q13438 667 aaPredicted RBP25.23■■□□□ 1.63
PKD1-218ENST00000485120 AKAP2Q9Y2D5 859 aa25.23■■□□□ 1.63
PKD1-218ENST00000485120 ZNF804BA4D1E1 1349 aa25.22■■□□□ 1.63
PKD1-218ENST00000485120 C15orf52Q6ZUT6 534 aaKnown RBP25.22■■□□□ 1.63
PKD1-218ENST00000485120 GPR108Q9NPR9 543 aa25.22■■□□□ 1.63
PKD1-218ENST00000485120 POLLQ9UGP5 575 aa25.22■■□□□ 1.63
PKD1-218ENST00000485120 COL4A1P02462 1669 aa25.22■■□□□ 1.63
PKD1-218ENST00000485120 C6orf229H3BNL8 230 aa25.21■■□□□ 1.63
PKD1-218ENST00000485120 UFL1O94874 794 aa25.21■■□□□ 1.63
PKD1-218ENST00000485120 KCNJ4P48050 445 aa25.21■■□□□ 1.63
PKD1-218ENST00000485120 PUM3Q15397 648 aaKnown RBP25.21■■□□□ 1.63
PKD1-218ENST00000485120 GCC1Q96CN9 775 aa25.21■■□□□ 1.63
PKD1-218ENST00000485120 TAF5LO75529 589 aa25.2■■□□□ 1.62
PKD1-218ENST00000485120 HELBQ8NG08 1087 aaPredicted RBP25.2■■□□□ 1.62
PKD1-218ENST00000485120 KIF1BPQ96EK5 621 aa25.2■■□□□ 1.62
PKD1-218ENST00000485120 ZC3H12CQ9C0D7 883 aaKnown RBP25.2■■□□□ 1.62
PKD1-218ENST00000485120 ARFGEF1Q9Y6D6 1849 aa25.19■■□□□ 1.62
PKD1-218ENST00000485120 SASH1O94885 1247 aa25.19■■□□□ 1.62
PKD1-218ENST00000485120 LMNB1P20700 586 aa25.19■■□□□ 1.62
PKD1-218ENST00000485120 WASHC4Q2M389 1173 aa25.19■■□□□ 1.62
PKD1-218ENST00000485120 LPIN2Q92539 896 aa25.19■■□□□ 1.62
PKD1-218ENST00000485120 EXOC6BQ9Y2D4 811 aa25.19■■□□□ 1.62
PKD1-218ENST00000485120 LRRC37AA6NMS7 1700 aa25.18■■□□□ 1.62
PKD1-218ENST00000485120 FGFR2P21802 821 aa25.18■■□□□ 1.62
PKD1-218ENST00000485120 KIAA2012Q0VF49 1180 aa25.18■■□□□ 1.62
PKD1-218ENST00000485120 TFCP2Q12800 502 aa25.18■■□□□ 1.62
PKD1-218ENST00000485120 SLC51AQ86UW1 340 aa25.18■■□□□ 1.62
PKD1-218ENST00000485120 IFIT1P09914 478 aaKnown RBP25.17■■□□□ 1.62
PKD1-218ENST00000485120 IARSP41252 1262 aaKnown RBP25.17■■□□□ 1.62
PKD1-218ENST00000485120 RHPN1Q8TCX5 695 aa25.17■■□□□ 1.62
PKD1-218ENST00000485120 MED23Q9ULK4 1368 aa25.17■■□□□ 1.62
PKD1-218ENST00000485120 TAF1P21675 1872 aa25.16■■□□□ 1.62
PKD1-218ENST00000485120 ZNF277Q9NRM2 450 aaPredicted RBP25.16■■□□□ 1.62
PKD1-218ENST00000485120 SLC5A1P13866 664 aa25.15■■□□□ 1.62
PKD1-218ENST00000485120 ATP2B3Q16720 1220 aa25.15■■□□□ 1.62
PKD1-218ENST00000485120 PPIP5K2O43314 1243 aa25.14■■□□□ 1.62
PKD1-218ENST00000485120 RASSF7Q02833 373 aa25.14■■□□□ 1.62
PKD1-218ENST00000485120 LRRCC1Q9C099 1032 aa25.14■■□□□ 1.62
PKD1-218ENST00000485120 SMC5Q8IY18 1101 aa25.13■■□□□ 1.61
PKD1-218ENST00000485120 CLASRPQ8N2M8 674 aaKnown RBP25.13■■□□□ 1.61
PKD1-218ENST00000485120 LARGE2Q8N3Y3 721 aa25.13■■□□□ 1.61
PKD1-218ENST00000485120 JDP2Q8WYK2 163 aa25.13■■□□□ 1.61
PKD1-218ENST00000485120 IRS2Q9Y4H2 1338 aa25.12■■□□□ 1.61
PKD1-218ENST00000485120 ZBTB22O15209 634 aa25.12■■□□□ 1.61
PKD1-218ENST00000485120 IGHDP01880 384 aa25.12■■□□□ 1.61
PKD1-218ENST00000485120 CAVIN4Q5BKX8 364 aa25.12■■□□□ 1.61
PKD1-218ENST00000485120 COA1Q9GZY4 146 aa25.12■■□□□ 1.61
PKD1-218ENST00000485120 A0A1B0GUL7 405 aa25.11■■□□□ 1.61
PKD1-218ENST00000485120 WTIPA6NIX2 430 aaPredicted RBP25.11■■□□□ 1.61
PKD1-218ENST00000485120 SNAP23O00161 211 aa25.11■■□□□ 1.61
PKD1-218ENST00000485120 AOC3Q16853 763 aa25.11■■□□□ 1.61
PKD1-218ENST00000485120 TNNI3KQ59H18 835 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms