RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 NFKB1P19838 968 aa6.66□□□□□ -1.34
TM9SF3-205ENST00000485093 NRLP54845 237 aa6.66□□□□□ -1.34
TM9SF3-205ENST00000485093 ELOA3BQ3SY89 546 aa6.66□□□□□ -1.34
TM9SF3-205ENST00000485093 DHX32Q7L7V1 743 aaKnown RBP6.66□□□□□ -1.34
TM9SF3-205ENST00000485093 TMC7Q7Z402 723 aa6.66□□□□□ -1.34
TM9SF3-205ENST00000485093 RAB44Q7Z6P3 723 aaPredicted RBP6.66□□□□□ -1.34
TM9SF3-205ENST00000485093 ELOA3Q8NG57 546 aa6.66□□□□□ -1.34
TM9SF3-205ENST00000485093 EDARADDQ8WWZ3 215 aa6.66□□□□□ -1.34
TM9SF3-205ENST00000485093 TTC9Q92623 222 aa6.66□□□□□ -1.34
TM9SF3-205ENST00000485093 BHMTQ93088 406 aa6.66□□□□□ -1.34
TM9SF3-205ENST00000485093 BTBD6Q96KE9 485 aa6.66□□□□□ -1.34
TM9SF3-205ENST00000485093 ASB16Q96NS5 453 aa6.66□□□□□ -1.34
TM9SF3-205ENST00000485093 PRDM6Q9NQX0 595 aa6.66□□□□□ -1.34
TM9SF3-205ENST00000485093 SALL4Q9UJQ4 1053 aa6.66□□□□□ -1.34
TM9SF3-205ENST00000485093 BRPF3Q9ULD4 1205 aa6.66□□□□□ -1.34
TM9SF3-205ENST00000485093 PRR12Q9ULL5 1215 aa6.66□□□□□ -1.34
TM9SF3-205ENST00000485093 NCAPD3P42695 1498 aa6.66□□□□□ -1.34
TM9SF3-205ENST00000485093 GPLD1P80108 840 aa6.65□□□□□ -1.34
TM9SF3-205ENST00000485093 COL13A1Q5TAT6 717 aaPredicted RBP6.65□□□□□ -1.34
TM9SF3-205ENST00000485093 ZFYVE28Q9HCC9 887 aa6.65□□□□□ -1.34
TM9SF3-205ENST00000485093 ABI2Q9NYB9 513 aaPredicted RBP6.65□□□□□ -1.34
TM9SF3-205ENST00000485093 NDUFB5O43674 189 aa6.64□□□□□ -1.35
TM9SF3-205ENST00000485093 RARAP10276 462 aa6.64□□□□□ -1.35
TM9SF3-205ENST00000485093 PDE3BQ13370 1112 aa6.64□□□□□ -1.35
TM9SF3-205ENST00000485093 COL19A1Q14993 1142 aa6.64□□□□□ -1.35
TM9SF3-205ENST00000485093 GRIK5Q16478 980 aa6.64□□□□□ -1.35
TM9SF3-205ENST00000485093 LINC00114Q6XXX2 140 aa6.64□□□□□ -1.35
TM9SF3-205ENST00000485093 CEP120Q8N960 986 aa6.64□□□□□ -1.35
TM9SF3-205ENST00000485093 C1orf127Q8N9H9 656 aa6.64□□□□□ -1.35
TM9SF3-205ENST00000485093 GALNT6Q8NCL4 622 aa6.64□□□□□ -1.35
TM9SF3-205ENST00000485093 DMRTB1Q96MA1 342 aa6.64□□□□□ -1.35
TM9SF3-205ENST00000485093 DNAJB12Q9NXW2 375 aaKnown RBP6.64□□□□□ -1.35
TM9SF3-205ENST00000485093 NFKBIEO00221 500 aa6.63□□□□□ -1.35
TM9SF3-205ENST00000485093 CYP2E1P05181 493 aaPredicted RBP6.63□□□□□ -1.35
TM9SF3-205ENST00000485093 PCSK2P16519 638 aa6.63□□□□□ -1.35
TM9SF3-205ENST00000485093 FMR1Q06787 632 aaKnown RBP eCLIP6.63□□□□□ -1.35
TM9SF3-205ENST00000485093 PCGF6Q9BYE7 350 aa6.63□□□□□ -1.35
TM9SF3-205ENST00000485093 NAGPAQ9UK23 515 aa6.63□□□□□ -1.35
TM9SF3-205ENST00000485093 WRNQ14191 1432 aaPredicted RBP eCLIP6.62□□□□□ -1.35
TM9SF3-205ENST00000485093 LOC102724428A0A0B4J2F2 783 aa6.62□□□□□ -1.35
TM9SF3-205ENST00000485093 MSTNO14793 375 aa6.62□□□□□ -1.35
TM9SF3-205ENST00000485093 ADH7P40394 386 aa6.62□□□□□ -1.35
TM9SF3-205ENST00000485093 MARSP56192 900 aaKnown RBP6.62□□□□□ -1.35
TM9SF3-205ENST00000485093 SIK1P57059 783 aa6.62□□□□□ -1.35
TM9SF3-205ENST00000485093 NEUROD1Q13562 356 aa6.62□□□□□ -1.35
TM9SF3-205ENST00000485093 PCSK7Q16549 785 aa6.62□□□□□ -1.35
TM9SF3-205ENST00000485093 KRT25Q7Z3Z0 450 aa6.62□□□□□ -1.35
TM9SF3-205ENST00000485093 PMEPA1Q969W9 287 aa6.62□□□□□ -1.35
TM9SF3-205ENST00000485093 SPOCK3Q9BQ16 436 aa6.62□□□□□ -1.35
TM9SF3-205ENST00000485093 FRRS1LQ9P0K9 344 aa6.62□□□□□ -1.35
TM9SF3-205ENST00000485093 FOXD3Q9UJU5 478 aaPredicted RBP6.62□□□□□ -1.35
TM9SF3-205ENST00000485093 SLC6A14Q9UN76 642 aa6.62□□□□□ -1.35
TM9SF3-205ENST00000485093 SOGA1O94964 1423 aa6.61□□□□□ -1.35
TM9SF3-205ENST00000485093 ZBTB7CA1YPR0 619 aa6.61□□□□□ -1.35
TM9SF3-205ENST00000485093 BTBD11A6QL63 1104 aa6.61□□□□□ -1.35
TM9SF3-205ENST00000485093 ITGB2P05107 769 aa6.61□□□□□ -1.35
TM9SF3-205ENST00000485093 DGKGP49619 791 aa6.61□□□□□ -1.35
TM9SF3-205ENST00000485093 PLAURQ03405 335 aa6.61□□□□□ -1.35
TM9SF3-205ENST00000485093 C8orf34Q49A92 452 aa6.61□□□□□ -1.35
TM9SF3-205ENST00000485093 PEAR1Q5VY43 1037 aaPredicted RBP6.61□□□□□ -1.35
TM9SF3-205ENST00000485093 ZNF438Q7Z4V0 828 aa6.61□□□□□ -1.35
TM9SF3-205ENST00000485093 MICALL1Q8N3F8 863 aa6.61□□□□□ -1.35
TM9SF3-205ENST00000485093 LPIN3Q9BQK8 851 aa6.61□□□□□ -1.35
TM9SF3-205ENST00000485093 DNAJC25Q9H1X3 360 aa6.61□□□□□ -1.35
TM9SF3-205ENST00000485093 BIN2Q9UBW5 565 aaPredicted RBP6.61□□□□□ -1.35
TM9SF3-205ENST00000485093 HMGXB3Q12766 1538 aa6.6□□□□□ -1.35
TM9SF3-205ENST00000485093 AAMPQ13685 434 aa6.6□□□□□ -1.35
TM9SF3-205ENST00000485093 PLA2G4EQ3MJ16 856 aa6.6□□□□□ -1.35
TM9SF3-205ENST00000485093 CHSY3Q70JA7 882 aa6.6□□□□□ -1.35
TM9SF3-205ENST00000485093 NPAS4Q8IUM7 802 aa6.6□□□□□ -1.35
TM9SF3-205ENST00000485093 GALNT12Q8IXK2 581 aa6.6□□□□□ -1.35
TM9SF3-205ENST00000485093 SNX29Q8TEQ0 813 aa6.6□□□□□ -1.35
TM9SF3-205ENST00000485093 PNMA5Q96PV4 448 aa6.6□□□□□ -1.35
TM9SF3-205ENST00000485093 NIF3L1Q9GZT8 377 aa6.6□□□□□ -1.35
TM9SF3-205ENST00000485093 TM4SF5O14894 197 aa6.59□□□□□ -1.35
TM9SF3-205ENST00000485093 EREGO14944 169 aa6.59□□□□□ -1.35
TM9SF3-205ENST00000485093 PROCP04070 461 aa6.59□□□□□ -1.35
TM9SF3-205ENST00000485093 PSAPP07602 524 aa6.59□□□□□ -1.35
TM9SF3-205ENST00000485093 MAPK1P28482 360 aa6.59□□□□□ -1.35
TM9SF3-205ENST00000485093 ENOX2Q16206 610 aaKnown RBP6.59□□□□□ -1.35
TM9SF3-205ENST00000485093 PERM1Q5SV97 790 aa6.59□□□□□ -1.35
TM9SF3-205ENST00000485093 TTC39BQ5VTQ0 682 aaPredicted RBP6.59□□□□□ -1.35
TM9SF3-205ENST00000485093 ADAMTSL4Q6UY14 1074 aa6.59□□□□□ -1.35
TM9SF3-205ENST00000485093 SVOPQ8N4V2 548 aa6.59□□□□□ -1.35
TM9SF3-205ENST00000485093 RUSC2Q8N2Y8 1516 aa6.59□□□□□ -1.35
TM9SF3-205ENST00000485093 EIF1AYO14602 144 aaKnown RBP6.58□□□□□ -1.36
TM9SF3-205ENST00000485093 ALBP02768 609 aa6.58□□□□□ -1.36
TM9SF3-205ENST00000485093 ERCC3P19447 782 aa6.58□□□□□ -1.36
TM9SF3-205ENST00000485093 BAG6P46379 1132 aa6.58□□□□□ -1.36
TM9SF3-205ENST00000485093 SNRPNP63162 240 aaKnown RBP6.58□□□□□ -1.36
TM9SF3-205ENST00000485093 PLCB3Q01970 1234 aa6.58□□□□□ -1.36
TM9SF3-205ENST00000485093 ORC1Q13415 861 aa6.58□□□□□ -1.36
TM9SF3-205ENST00000485093 USPL1Q5W0Q7 1092 aa6.58□□□□□ -1.36
TM9SF3-205ENST00000485093 FBXO33Q7Z6M2 555 aa6.58□□□□□ -1.36
TM9SF3-205ENST00000485093 ZSCAN29Q8IWY8 852 aaPredicted RBP6.58□□□□□ -1.36
TM9SF3-205ENST00000485093 CSRNP1Q96S65 589 aa6.58□□□□□ -1.36
TM9SF3-205ENST00000485093 CC2D2AQ9P2K1 1620 aa6.58□□□□□ -1.36
TM9SF3-205ENST00000485093 ANKRD33BA6NCL7 494 aa6.57□□□□□ -1.36
TM9SF3-205ENST00000485093 J3QW42 95 aa6.57□□□□□ -1.36
TM9SF3-205ENST00000485093 K7ELQ4 463 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms