RNA–Protein interactions for RNA: ENST00000484873.6

CAPN8-210, Transcript of calpain 8, humanhuman

TSL 3

Gene CAPN8, Length 364 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-210ENST00000484873 GTF3C3Q9Y5Q9 886 aa5.25□□□□□ -1.57
CAPN8-210ENST00000484873 FAM205AQ6ZU69 1335 aa5.24□□□□□ -1.57
CAPN8-210ENST00000484873 STARD3NLO95772 234 aa5.24□□□□□ -1.57
CAPN8-210ENST00000484873 EGFRP00533 1210 aa5.24□□□□□ -1.57
CAPN8-210ENST00000484873 PRMT2P55345 433 aa5.24□□□□□ -1.57
CAPN8-210ENST00000484873 NBR1Q14596 966 aa5.24□□□□□ -1.57
CAPN8-210ENST00000484873 MTFR1Q15390 333 aa5.24□□□□□ -1.57
CAPN8-210ENST00000484873 C7orf61Q8IZ16 206 aa5.24□□□□□ -1.57
CAPN8-210ENST00000484873 U2AF1L4Q8WU68 220 aaKnown RBP5.24□□□□□ -1.57
CAPN8-210ENST00000484873 MYLIPQ8WY64 445 aa5.24□□□□□ -1.57
CAPN8-210ENST00000484873 RNF208Q9H0X6 261 aa5.24□□□□□ -1.57
CAPN8-210ENST00000484873 SLC12A5Q9H2X9 1139 aa5.24□□□□□ -1.57
CAPN8-210ENST00000484873 SEMA6BQ9H3T3 888 aa5.24□□□□□ -1.57
CAPN8-210ENST00000484873 ZMYND8Q9ULU4 1186 aaPredicted RBP5.24□□□□□ -1.57
CAPN8-210ENST00000484873 TBC1D2BQ9UPU7 963 aa5.24□□□□□ -1.57
CAPN8-210ENST00000484873 KDM3BQ7LBC6 1761 aa5.24□□□□□ -1.57
CAPN8-210ENST00000484873 IGF2BP3O00425 579 aaKnown RBP eCLIP5.23□□□□□ -1.57
CAPN8-210ENST00000484873 ZBTB48P10074 688 aaPredicted RBP5.23□□□□□ -1.57
CAPN8-210ENST00000484873 CAP1Q01518 475 aa5.23□□□□□ -1.57
CAPN8-210ENST00000484873 KIAA2012Q0VF49 1180 aa5.23□□□□□ -1.57
CAPN8-210ENST00000484873 KIF22Q14807 665 aa5.23□□□□□ -1.57
CAPN8-210ENST00000484873 CRY2Q49AN0 593 aa5.23□□□□□ -1.57
CAPN8-210ENST00000484873 C1orf141Q5JVX7 400 aa5.23□□□□□ -1.57
CAPN8-210ENST00000484873 ANGEL2Q5VTE6 544 aaKnown RBP5.23□□□□□ -1.57
CAPN8-210ENST00000484873 RPGRQ92834 1020 aaKnown RBP5.23□□□□□ -1.57
CAPN8-210ENST00000484873 ZNF330Q9Y3S2 320 aaPredicted RBP5.23□□□□□ -1.57
CAPN8-210ENST00000484873 COL2A1P02458 1487 aaPredicted RBP5.23□□□□□ -1.57
CAPN8-210ENST00000484873 SCN7AQ01118 1682 aa5.23□□□□□ -1.57
CAPN8-210ENST00000484873 ST18O60284 1047 aa5.22□□□□□ -1.57
CAPN8-210ENST00000484873 GPR37L1O60883 481 aa5.22□□□□□ -1.57
CAPN8-210ENST00000484873 CAMTA2O94983 1202 aa5.22□□□□□ -1.57
CAPN8-210ENST00000484873 SGPL1O95470 568 aa5.22□□□□□ -1.57
CAPN8-210ENST00000484873 CCL5P13501 91 aa5.22□□□□□ -1.57
CAPN8-210ENST00000484873 GTF2E1P29083 439 aaPredicted RBP5.22□□□□□ -1.57
CAPN8-210ENST00000484873 IL6STP40189 918 aaPredicted RBP5.22□□□□□ -1.57
CAPN8-210ENST00000484873 UBXN2AP68543 259 aa5.22□□□□□ -1.57
CAPN8-210ENST00000484873 MRPS5P82675 430 aaKnown RBP5.22□□□□□ -1.57
CAPN8-210ENST00000484873 MAP3K11Q16584 847 aa5.22□□□□□ -1.57
CAPN8-210ENST00000484873 AMOTQ4VCS5 1084 aa5.22□□□□□ -1.57
CAPN8-210ENST00000484873 PLEKHO1Q53GL0 409 aaPredicted RBP5.22□□□□□ -1.57
CAPN8-210ENST00000484873 ZNF530Q6P9A1 599 aaPredicted RBP5.22□□□□□ -1.57
CAPN8-210ENST00000484873 CLEC4GQ6UXB4 293 aa5.22□□□□□ -1.57
CAPN8-210ENST00000484873 ARMC9Q7Z3E5 817 aa5.22□□□□□ -1.57
CAPN8-210ENST00000484873 EYA1Q99502 592 aa5.22□□□□□ -1.57
CAPN8-210ENST00000484873 RTFDC1Q9BY42 306 aaPredicted RBP5.22□□□□□ -1.57
CAPN8-210ENST00000484873 IGSF5Q9NSI5 407 aa5.22□□□□□ -1.57
CAPN8-210ENST00000484873 THEGQ9P2T0 379 aa5.22□□□□□ -1.57
CAPN8-210ENST00000484873 ZNF652Q9Y2D9 606 aa5.22□□□□□ -1.57
CAPN8-210ENST00000484873 ZNF646O15015 1829 aaPredicted RBP5.21□□□□□ -1.58
CAPN8-210ENST00000484873 LOC105371045A0A1W2PR82 267 aa5.21□□□□□ -1.58
CAPN8-210ENST00000484873 YDJCA8MPS7 323 aa5.21□□□□□ -1.58
CAPN8-210ENST00000484873 PSMD14O00487 310 aa5.21□□□□□ -1.58
CAPN8-210ENST00000484873 SYN1P17600 705 aa5.21□□□□□ -1.58
CAPN8-210ENST00000484873 HOXA10P31260 410 aaPredicted RBP5.21□□□□□ -1.58
CAPN8-210ENST00000484873 GRK4P32298 578 aa5.21□□□□□ -1.58
CAPN8-210ENST00000484873 NHLH1Q02575 133 aa5.21□□□□□ -1.58
CAPN8-210ENST00000484873 PTPN12Q05209 780 aaKnown RBP5.21□□□□□ -1.58
CAPN8-210ENST00000484873 NECAB2Q7Z6G3 386 aa5.21□□□□□ -1.58
CAPN8-210ENST00000484873 NUTM1Q86Y26 1132 aa5.21□□□□□ -1.58
CAPN8-210ENST00000484873 NECTIN2Q92692 538 aa5.21□□□□□ -1.58
CAPN8-210ENST00000484873 RBM17Q96I25 401 aaKnown RBP5.21□□□□□ -1.58
CAPN8-210ENST00000484873 RIC1Q4ADV7 1423 aa5.21□□□□□ -1.58
CAPN8-210ENST00000484873 PKD1L2Q7Z442 2459 aa5.2□□□□□ -1.58
CAPN8-210ENST00000484873 LAMA2P24043 3122 aaKnown RBP5.2□□□□□ -1.58
CAPN8-210ENST00000484873 EYSQ5T1H1 3165 aa5.2□□□□□ -1.58
CAPN8-210ENST00000484873 TCERG1O14776 1098 aaKnown RBP5.2□□□□□ -1.58
CAPN8-210ENST00000484873 RGS20O76081 388 aa5.2□□□□□ -1.58
CAPN8-210ENST00000484873 TFRCP02786 760 aaKnown RBP5.2□□□□□ -1.58
CAPN8-210ENST00000484873 SCARF1Q14162 830 aa5.2□□□□□ -1.58
CAPN8-210ENST00000484873 DPP8Q6V1X1 898 aaPredicted RBP5.2□□□□□ -1.58
CAPN8-210ENST00000484873 DZIP3Q86Y13 1208 aaKnown RBP5.2□□□□□ -1.58
CAPN8-210ENST00000484873 USP38Q8NB14 1042 aa5.2□□□□□ -1.58
CAPN8-210ENST00000484873 RAET1EQ8TD07 263 aa5.2□□□□□ -1.58
CAPN8-210ENST00000484873 SLC10A4Q96EP9 437 aa5.2□□□□□ -1.58
CAPN8-210ENST00000484873 PAWRQ96IZ0 340 aaKnown RBP5.2□□□□□ -1.58
CAPN8-210ENST00000484873 TRIM47Q96LD4 638 aa5.2□□□□□ -1.58
CAPN8-210ENST00000484873 CRAMP1Q96RY5 1269 aa5.2□□□□□ -1.58
CAPN8-210ENST00000484873 KCNH6Q9H252 994 aa5.2□□□□□ -1.58
CAPN8-210ENST00000484873 ZFYVE28Q9HCC9 887 aa5.2□□□□□ -1.58
CAPN8-210ENST00000484873 BIN2Q9UBW5 565 aaPredicted RBP5.2□□□□□ -1.58
CAPN8-210ENST00000484873 ATP6V0A2Q9Y487 856 aa5.2□□□□□ -1.58
CAPN8-210ENST00000484873 RIPOR2Q9Y4F9 1068 aa5.2□□□□□ -1.58
CAPN8-210ENST00000484873 ASTN2O75129 1339 aaPredicted RBP5.2□□□□□ -1.58
CAPN8-210ENST00000484873 MUC6Q6W4X9 2439 aa5.19□□□□□ -1.58
CAPN8-210ENST00000484873 PRUNE2Q8WUY3 3088 aa5.19□□□□□ -1.58
CAPN8-210ENST00000484873 PPM1GO15355 546 aaPredicted RBP5.19□□□□□ -1.58
CAPN8-210ENST00000484873 WDHD1O75717 1129 aaPredicted RBP5.19□□□□□ -1.58
CAPN8-210ENST00000484873 HOXD10P28358 340 aa5.19□□□□□ -1.58
CAPN8-210ENST00000484873 LACTBP83111 547 aaPredicted RBP5.19□□□□□ -1.58
CAPN8-210ENST00000484873 LDLRAD1Q5T700 205 aa5.19□□□□□ -1.58
CAPN8-210ENST00000484873 ZNF496Q96IT1 587 aaPredicted RBP5.19□□□□□ -1.58
CAPN8-210ENST00000484873 TEX13AQ9BXU3 409 aaPredicted RBP5.19□□□□□ -1.58
CAPN8-210ENST00000484873 EPHX3Q9H6B9 360 aa5.19□□□□□ -1.58
CAPN8-210ENST00000484873 SLC52A2Q9HAB3 445 aa5.19□□□□□ -1.58
CAPN8-210ENST00000484873 NIP7Q9Y221 180 aaKnown RBP eCLIP5.19□□□□□ -1.58
CAPN8-210ENST00000484873 SSC5DA1L4H1 1573 aa5.19□□□□□ -1.58
CAPN8-210ENST00000484873 TESPA1A2RU30 521 aaPredicted RBP5.18□□□□□ -1.58
CAPN8-210ENST00000484873 UNCXA6NJT0 531 aa5.18□□□□□ -1.58
CAPN8-210ENST00000484873 SMIM22K7EJ46 135 aa5.18□□□□□ -1.58
CAPN8-210ENST00000484873 FYB1O15117 783 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms