RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 ARHGAP45Q92619 1136 aa17.32■□□□□ 0.36
RXRA-203ENST00000484822 TRMT112Q9UI30 125 aaKnown RBP17.32■□□□□ 0.36
RXRA-203ENST00000484822 CCDC144CPQ8IYA2 1237 aa17.32■□□□□ 0.36
RXRA-203ENST00000484822 CARD14Q9BXL6 1004 aa17.32■□□□□ 0.36
RXRA-203ENST00000484822 HDAC1Q13547 482 aaPredicted RBP17.32■□□□□ 0.36
RXRA-203ENST00000484822 EVI5LQ96CN4 794 aa17.32■□□□□ 0.36
RXRA-203ENST00000484822 EBAG9O00559 213 aa17.32■□□□□ 0.36
RXRA-203ENST00000484822 AKR1B10O60218 316 aa17.32■□□□□ 0.36
RXRA-203ENST00000484822 SSRP1Q08945 709 aaKnown RBP17.32■□□□□ 0.36
RXRA-203ENST00000484822 FBF1Q8TES7 1133 aa17.32■□□□□ 0.36
RXRA-203ENST00000484822 DRC1Q96MC2 740 aa17.32■□□□□ 0.36
RXRA-203ENST00000484822 DNAI2Q9GZS0 605 aa17.32■□□□□ 0.36
RXRA-203ENST00000484822 SEC24BO95487 1268 aa17.31■□□□□ 0.36
RXRA-203ENST00000484822 TYRO3Q06418 890 aa17.31■□□□□ 0.36
RXRA-203ENST00000484822 CAVIN4Q5BKX8 364 aa17.31■□□□□ 0.36
RXRA-203ENST00000484822 NEK1Q96PY6 1258 aa17.31■□□□□ 0.36
RXRA-203ENST00000484822 RASSF4Q9H2L5 321 aa17.31■□□□□ 0.36
RXRA-203ENST00000484822 SYKP43405 635 aa17.31■□□□□ 0.36
RXRA-203ENST00000484822 SYT10Q6XYQ8 523 aa17.31■□□□□ 0.36
RXRA-203ENST00000484822 ZRANB1Q9UGI0 708 aa17.31■□□□□ 0.36
RXRA-203ENST00000484822 FGFR1OPO95684 399 aaKnown RBP17.31■□□□□ 0.36
RXRA-203ENST00000484822 IFIT3O14879 490 aaKnown RBP17.31■□□□□ 0.36
RXRA-203ENST00000484822 GCP02774 474 aa17.31■□□□□ 0.36
RXRA-203ENST00000484822 TAOK3Q9H2K8 898 aa17.31■□□□□ 0.36
RXRA-203ENST00000484822 ZSCAN16Q9H4T2 348 aaPredicted RBP17.31■□□□□ 0.36
RXRA-203ENST00000484822 TMEM2Q9UHN6 1383 aa17.31■□□□□ 0.36
RXRA-203ENST00000484822 TRIM21P19474 475 aaKnown RBP17.3■□□□□ 0.36
RXRA-203ENST00000484822 LMOD1P29536 600 aaPredicted RBP17.3■□□□□ 0.36
RXRA-203ENST00000484822 CCDC96Q2M329 555 aa17.3■□□□□ 0.36
RXRA-203ENST00000484822 ZGPATQ8N5A5 531 aaKnown RBP17.3■□□□□ 0.36
RXRA-203ENST00000484822 CTCFLQ8NI51 663 aaPredicted RBP17.3■□□□□ 0.36
RXRA-203ENST00000484822 CEP63Q96MT8 703 aa17.3■□□□□ 0.36
RXRA-203ENST00000484822 IDEP14735 1019 aa17.3■□□□□ 0.36
RXRA-203ENST00000484822 SMC5Q8IY18 1101 aa17.3■□□□□ 0.36
RXRA-203ENST00000484822 GOLGA1Q92805 767 aa17.3■□□□□ 0.36
RXRA-203ENST00000484822 BRF1Q92994 677 aa17.3■□□□□ 0.36
RXRA-203ENST00000484822 F13A1P00488 732 aa17.3■□□□□ 0.36
RXRA-203ENST00000484822 MAP3K2Q9Y2U5 619 aa17.3■□□□□ 0.36
RXRA-203ENST00000484822 IARSP41252 1262 aaKnown RBP17.3■□□□□ 0.36
RXRA-203ENST00000484822 CKAP4Q07065 602 aaKnown RBP17.3■□□□□ 0.36
RXRA-203ENST00000484822 EHBP1Q8NDI1 1231 aa17.3■□□□□ 0.36
RXRA-203ENST00000484822 HAND2P61296 217 aa17.29■□□□□ 0.36
RXRA-203ENST00000484822 HOOK3Q86VS8 718 aa17.29■□□□□ 0.36
RXRA-203ENST00000484822 NPC1L1Q9UHC9 1359 aa17.29■□□□□ 0.36
RXRA-203ENST00000484822 TTLL12Q14166 644 aaPredicted RBP17.29■□□□□ 0.36
RXRA-203ENST00000484822 DNAJC21Q5F1R6 531 aaKnown RBP17.29■□□□□ 0.36
RXRA-203ENST00000484822 MICU3Q86XE3 530 aa17.29■□□□□ 0.36
RXRA-203ENST00000484822 GCC2Q8IWJ2 1684 aa17.29■□□□□ 0.36
RXRA-203ENST00000484822 POTEJP0CG39 1038 aa17.29■□□□□ 0.36
RXRA-203ENST00000484822 OTUD6BQ8N6M0 293 aa17.29■□□□□ 0.36
RXRA-203ENST00000484822 LRRC59Q96AG4 307 aaKnown RBP17.29■□□□□ 0.36
RXRA-203ENST00000484822 RANBP6O60518 1105 aaKnown RBP17.28■□□□□ 0.36
RXRA-203ENST00000484822 SPTY2D1Q68D10 685 aaPredicted RBP17.28■□□□□ 0.36
RXRA-203ENST00000484822 ZBTB3Q9H5J0 574 aa17.28■□□□□ 0.36
RXRA-203ENST00000484822 CCDC194A0A1B0GVG4 234 aa17.28■□□□□ 0.36
RXRA-203ENST00000484822 LRRC2Q9BYS8 371 aa17.28■□□□□ 0.36
RXRA-203ENST00000484822 PUF60Q9UHX1 559 aaKnown RBP17.28■□□□□ 0.36
RXRA-203ENST00000484822 POLD1P28340 1107 aa17.28■□□□□ 0.36
RXRA-203ENST00000484822 NLRP5P59047 1200 aa17.28■□□□□ 0.36
RXRA-203ENST00000484822 CCDC40Q4G0X9 1142 aa17.28■□□□□ 0.36
RXRA-203ENST00000484822 TCERG1LQ5VWI1 586 aa17.28■□□□□ 0.36
RXRA-203ENST00000484822 RBSNQ9H1K0 784 aa17.28■□□□□ 0.36
RXRA-203ENST00000484822 CWC25Q9NXE8 425 aaPredicted RBP17.28■□□□□ 0.36
RXRA-203ENST00000484822 EDC4Q6P2E9 1401 aaKnown RBP17.28■□□□□ 0.36
RXRA-203ENST00000484822 ANKRD18BA2A2Z9 1011 aa17.28■□□□□ 0.36
RXRA-203ENST00000484822 PI4KAP2A4QPH2 592 aa17.28■□□□□ 0.36
RXRA-203ENST00000484822 PI4KAP1Q8N8J0 262 aa17.28■□□□□ 0.36
RXRA-203ENST00000484822 SERPINA10Q9UK55 444 aa17.28■□□□□ 0.36
RXRA-203ENST00000484822 YEATS2Q9ULM3 1422 aa17.27■□□□□ 0.36
RXRA-203ENST00000484822 ZEB2O60315 1214 aa17.27■□□□□ 0.36
RXRA-203ENST00000484822 CHD1O14646 1710 aa17.27■□□□□ 0.36
RXRA-203ENST00000484822 KARSQ15046 597 aaKnown RBP17.27■□□□□ 0.36
RXRA-203ENST00000484822 MSL1Q68DK7 614 aa17.27■□□□□ 0.36
RXRA-203ENST00000484822 MRPS27Q92552 414 aaKnown RBP17.27■□□□□ 0.36
RXRA-203ENST00000484822 RHOXF2BP0C7M4 288 aa17.27■□□□□ 0.36
RXRA-203ENST00000484822 RHOXF2Q9BQY4 288 aa17.27■□□□□ 0.36
RXRA-203ENST00000484822 FSD2A1L4K1 749 aa17.27■□□□□ 0.35
RXRA-203ENST00000484822 PER1O15534 1290 aaPredicted RBP17.27■□□□□ 0.35
RXRA-203ENST00000484822 CCDC6Q16204 474 aa17.27■□□□□ 0.35
RXRA-203ENST00000484822 IP6K1Q92551 441 aa17.27■□□□□ 0.35
RXRA-203ENST00000484822 SEC63Q9UGP8 760 aaKnown RBP17.27■□□□□ 0.35
RXRA-203ENST00000484822 MAGI2Q86UL8 1455 aa17.26■□□□□ 0.35
RXRA-203ENST00000484822 NBPF11Q86T75 865 aa17.26■□□□□ 0.35
RXRA-203ENST00000484822 KIF20AO95235 890 aa17.26■□□□□ 0.35
RXRA-203ENST00000484822 IL2RBP14784 551 aa17.26■□□□□ 0.35
RXRA-203ENST00000484822 ANAPC15P60006 121 aa17.26■□□□□ 0.35
RXRA-203ENST00000484822 CTAGE9A4FU28 777 aa17.26■□□□□ 0.35
RXRA-203ENST00000484822 GOLIM4O00461 696 aa17.26■□□□□ 0.35
RXRA-203ENST00000484822 OPA1O60313 960 aa17.26■□□□□ 0.35
RXRA-203ENST00000484822 PPP1R42Q7Z4L9 355 aa17.26■□□□□ 0.35
RXRA-203ENST00000484822 TRIM47Q96LD4 638 aa17.26■□□□□ 0.35
RXRA-203ENST00000484822 AFMP43652 599 aa17.26■□□□□ 0.35
RXRA-203ENST00000484822 KRBA2Q6ZNG9 492 aa17.26■□□□□ 0.35
RXRA-203ENST00000484822 SIRT1Q96EB6 747 aa17.26■□□□□ 0.35
RXRA-203ENST00000484822 VGLL3A8MV65 326 aa17.25■□□□□ 0.35
RXRA-203ENST00000484822 KANK3Q6NY19 840 aa17.25■□□□□ 0.35
RXRA-203ENST00000484822 CCDC121Q6ZUS5 278 aa17.25■□□□□ 0.35
RXRA-203ENST00000484822 ESYT1Q9BSJ8 1104 aa17.25■□□□□ 0.35
RXRA-203ENST00000484822 LZTFL1Q9NQ48 299 aa17.25■□□□□ 0.35
RXRA-203ENST00000484822 TNIP1Q15025 636 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms