RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 TSR2Q969E8 191 aaKnown RBP14.74□□□□□ -0.05
SCFD1-206ENST00000484733 PI4KAP2A4QPH2 592 aa14.73□□□□□ -0.05
SCFD1-206ENST00000484733 ZNF609O15014 1411 aa14.73□□□□□ -0.05
SCFD1-206ENST00000484733 IGKV5-2P06315 115 aa14.73□□□□□ -0.05
SCFD1-206ENST00000484733 TWISTNBQ3B726 338 aaPredicted RBP14.73□□□□□ -0.05
SCFD1-206ENST00000484733 PI4KAP1Q8N8J0 262 aa14.73□□□□□ -0.05
SCFD1-206ENST00000484733 CAPNS2Q96L46 248 aa14.73□□□□□ -0.05
SCFD1-206ENST00000484733 ZC3H12CQ9C0D7 883 aaKnown RBP14.73□□□□□ -0.05
SCFD1-206ENST00000484733 RTL9Q8NET4 1388 aa14.73□□□□□ -0.05
SCFD1-206ENST00000484733 VIL1P09327 827 aaKnown RBP14.72□□□□□ -0.05
SCFD1-206ENST00000484733 GGA1Q9UJY5 639 aa14.72□□□□□ -0.05
SCFD1-206ENST00000484733 NEXNQ0ZGT2 675 aa14.72□□□□□ -0.05
SCFD1-206ENST00000484733 ANKRD18AQ8IVF6 992 aa14.72□□□□□ -0.05
SCFD1-206ENST00000484733 GLIS2Q9BZE0 524 aaPredicted RBP14.72□□□□□ -0.05
SCFD1-206ENST00000484733 ZBTB12Q9Y330 459 aaPredicted RBP14.72□□□□□ -0.05
SCFD1-206ENST00000484733 CTSWP56202 376 aa14.71□□□□□ -0.05
SCFD1-206ENST00000484733 DOK7Q18PE1 504 aa14.71□□□□□ -0.05
SCFD1-206ENST00000484733 WDR63Q8IWG1 891 aa14.71□□□□□ -0.05
SCFD1-206ENST00000484733 CACNA1FO60840 1977 aa14.71□□□□□ -0.05
SCFD1-206ENST00000484733 PSME4Q14997 1843 aa14.71□□□□□ -0.05
SCFD1-206ENST00000484733 SHTN1A0MZ66 631 aa14.71□□□□□ -0.05
SCFD1-206ENST00000484733 UFL1O94874 794 aa14.71□□□□□ -0.05
SCFD1-206ENST00000484733 CELF2O95319 508 aaKnown RBP14.71□□□□□ -0.05
SCFD1-206ENST00000484733 ATP2B4P23634 1241 aa14.71□□□□□ -0.05
SCFD1-206ENST00000484733 SAPCD2Q86UD0 394 aa14.71□□□□□ -0.05
SCFD1-206ENST00000484733 JARID2Q92833 1246 aaPredicted RBP14.71□□□□□ -0.05
SCFD1-206ENST00000484733 CDC5LQ99459 802 aaKnown RBP14.71□□□□□ -0.05
SCFD1-206ENST00000484733 ANKIB1Q9P2G1 1089 aa14.71□□□□□ -0.05
SCFD1-206ENST00000484733 XDHP47989 1333 aa14.71□□□□□ -0.06
SCFD1-206ENST00000484733 MYH3P11055 1940 aa14.71□□□□□ -0.06
SCFD1-206ENST00000484733 NEURL1BA8MQ27 555 aa14.7□□□□□ -0.06
SCFD1-206ENST00000484733 H7C1W4 665 aa14.7□□□□□ -0.06
SCFD1-206ENST00000484733 HSPA8P11142 646 aaKnown RBP14.7□□□□□ -0.06
SCFD1-206ENST00000484733 MAP2K2P36507 400 aa14.7□□□□□ -0.06
SCFD1-206ENST00000484733 TTLL11Q8NHH1 800 aa14.7□□□□□ -0.06
SCFD1-206ENST00000484733 KCNQ5Q9NR82 932 aa14.7□□□□□ -0.06
SCFD1-206ENST00000484733 SLC4A2P04920 1241 aa14.7□□□□□ -0.06
SCFD1-206ENST00000484733 CYP4F22Q6NT55 531 aa14.7□□□□□ -0.06
SCFD1-206ENST00000484733 G2E3Q7L622 706 aa14.7□□□□□ -0.06
SCFD1-206ENST00000484733 GPR101Q96P66 508 aaPredicted RBP14.7□□□□□ -0.06
SCFD1-206ENST00000484733 MRS2Q9HD23 443 aa14.7□□□□□ -0.06
SCFD1-206ENST00000484733 SCN9AQ15858 1988 aa14.7□□□□□ -0.06
SCFD1-206ENST00000484733 SAMD7Q7Z3H4 446 aa14.69□□□□□ -0.06
SCFD1-206ENST00000484733 PLA2G12BQ9BX93 195 aa14.69□□□□□ -0.06
SCFD1-206ENST00000484733 BSDC1Q9NW68 430 aaPredicted RBP14.69□□□□□ -0.06
SCFD1-206ENST00000484733 ANP32CO43423 234 aa14.69□□□□□ -0.06
SCFD1-206ENST00000484733 USP48Q86UV5 1035 aa14.69□□□□□ -0.06
SCFD1-206ENST00000484733 AGBL3Q8NEM8 1001 aa14.69□□□□□ -0.06
SCFD1-206ENST00000484733 ZNF316A6NFI3 1004 aaPredicted RBP14.68□□□□□ -0.06
SCFD1-206ENST00000484733 G3V3G9 751 aa14.68□□□□□ -0.06
SCFD1-206ENST00000484733 LBX1P52954 281 aa14.68□□□□□ -0.06
SCFD1-206ENST00000484733 DCAF8Q5TAQ9 597 aa14.68□□□□□ -0.06
SCFD1-206ENST00000484733 FANCIQ9NVI1 1328 aa14.68□□□□□ -0.06
SCFD1-206ENST00000484733 ZNF280AP59817 542 aaPredicted RBP14.67□□□□□ -0.06
SCFD1-206ENST00000484733 CWF19L2Q2TBE0 894 aaKnown RBP14.67□□□□□ -0.06
SCFD1-206ENST00000484733 TBC1D10BQ4KMP7 808 aaPredicted RBP14.67□□□□□ -0.06
SCFD1-206ENST00000484733 PAXIP1Q6ZW49 1069 aaPredicted RBP14.67□□□□□ -0.06
SCFD1-206ENST00000484733 CCDC85AQ96PX6 553 aaPredicted RBP14.67□□□□□ -0.06
SCFD1-206ENST00000484733 VAMP4O75379 141 aa14.67□□□□□ -0.06
SCFD1-206ENST00000484733 FLIIQ13045 1269 aa14.67□□□□□ -0.06
SCFD1-206ENST00000484733 RSBN1LQ6PCB5 846 aaPredicted RBP14.67□□□□□ -0.06
SCFD1-206ENST00000484733 PODNQ7Z5L7 613 aa14.67□□□□□ -0.06
SCFD1-206ENST00000484733 GREM2Q9H772 168 aa14.67□□□□□ -0.06
SCFD1-206ENST00000484733 MINPP1Q9UNW1 487 aa14.67□□□□□ -0.06
SCFD1-206ENST00000484733 MED23Q9ULK4 1368 aa14.67□□□□□ -0.06
SCFD1-206ENST00000484733 CASP7P55210 303 aa14.66□□□□□ -0.06
SCFD1-206ENST00000484733 GCKRQ14397 625 aa14.66□□□□□ -0.06
SCFD1-206ENST00000484733 DCPSQ96C86 337 aaKnown RBP14.66□□□□□ -0.06
SCFD1-206ENST00000484733 GMLQ99445 158 aa14.66□□□□□ -0.06
SCFD1-206ENST00000484733 EGFRP00533 1210 aa14.66□□□□□ -0.06
SCFD1-206ENST00000484733 KIF4BQ2VIQ3 1234 aa14.66□□□□□ -0.06
SCFD1-206ENST00000484733 LINS1Q8NG48 757 aa14.66□□□□□ -0.06
SCFD1-206ENST00000484733 DNAAF4Q8WXU2 420 aa14.66□□□□□ -0.06
SCFD1-206ENST00000484733 MYH16Q9H6N6 1097 aa14.66□□□□□ -0.06
SCFD1-206ENST00000484733 CAPN15O75808 1086 aa14.65□□□□□ -0.06
SCFD1-206ENST00000484733 CSF1RP07333 972 aa14.65□□□□□ -0.06
SCFD1-206ENST00000484733 KRT26Q7Z3Y9 468 aa14.65□□□□□ -0.06
SCFD1-206ENST00000484733 BEGAINQ9BUH8 593 aa14.65□□□□□ -0.06
SCFD1-206ENST00000484733 POLR2AP24928 1970 aaKnown RBP14.65□□□□□ -0.06
SCFD1-206ENST00000484733 AOC2O75106 756 aa14.65□□□□□ -0.06
SCFD1-206ENST00000484733 ZNF408Q9H9D4 720 aa14.65□□□□□ -0.06
SCFD1-206ENST00000484733 LEMD3Q9Y2U8 911 aa14.65□□□□□ -0.06
SCFD1-206ENST00000484733 SPEF2Q9C093 1822 aa14.64□□□□□ -0.07
SCFD1-206ENST00000484733 USP17L3A6NCW0 530 aa14.64□□□□□ -0.07
SCFD1-206ENST00000484733 USP17L4A6NCW7 530 aa14.64□□□□□ -0.07
SCFD1-206ENST00000484733 CA12O43570 354 aa14.64□□□□□ -0.07
SCFD1-206ENST00000484733 CCT4P50991 539 aaKnown RBP14.64□□□□□ -0.07
SCFD1-206ENST00000484733 BRPF1P55201 1214 aaPredicted RBP14.64□□□□□ -0.07
SCFD1-206ENST00000484733 RBM26Q5T8P6 1007 aaKnown RBP14.64□□□□□ -0.07
SCFD1-206ENST00000484733 USP17L1Q7RTZ2 530 aa14.64□□□□□ -0.07
SCFD1-206ENST00000484733 UBE3BQ7Z3V4 1068 aa14.64□□□□□ -0.07
SCFD1-206ENST00000484733 PCNTO95613 3336 aa14.64□□□□□ -0.07
SCFD1-206ENST00000484733 FKBP5Q13451 457 aaPredicted RBP14.64□□□□□ -0.07
SCFD1-206ENST00000484733 ZNF646O15015 1829 aaPredicted RBP14.63□□□□□ -0.07
SCFD1-206ENST00000484733 IGHMBP2P38935 993 aaKnown RBP14.63□□□□□ -0.07
SCFD1-206ENST00000484733 MMP14P50281 582 aa14.63□□□□□ -0.07
SCFD1-206ENST00000484733 EXOSC9Q06265 439 aaKnown RBP14.63□□□□□ -0.07
SCFD1-206ENST00000484733 ANKRD2Q9GZV1 360 aa14.63□□□□□ -0.07
SCFD1-206ENST00000484733 GRM1Q13255 1194 aa14.63□□□□□ -0.07
SCFD1-206ENST00000484733 C2orf69Q8N8R5 385 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms