RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 MRPL50Q8N5N7 158 aaKnown RBP22.69■■□□□ 1.22
RNF38-207ENST00000484621 FZD9O00144 591 aa22.68■■□□□ 1.22
RNF38-207ENST00000484621 PPIP5K2O43314 1243 aa22.68■■□□□ 1.22
RNF38-207ENST00000484621 BEND3Q5T5X7 828 aa22.68■■□□□ 1.22
RNF38-207ENST00000484621 SPEF2Q9C093 1822 aa22.67■■□□□ 1.22
RNF38-207ENST00000484621 TRAF5O00463 557 aa22.67■■□□□ 1.22
RNF38-207ENST00000484621 RGS19P49795 217 aa22.67■■□□□ 1.22
RNF38-207ENST00000484621 MAP2K1Q02750 393 aaPredicted RBP22.67■■□□□ 1.22
RNF38-207ENST00000484621 AOC3Q16853 763 aa22.67■■□□□ 1.22
RNF38-207ENST00000484621 SSH1Q8WYL5 1049 aa22.67■■□□□ 1.22
RNF38-207ENST00000484621 CAPNS2Q96L46 248 aa22.67■■□□□ 1.22
RNF38-207ENST00000484621 BCL2L13Q9BXK5 485 aa22.67■■□□□ 1.22
RNF38-207ENST00000484621 AOC2O75106 756 aa22.66■■□□□ 1.22
RNF38-207ENST00000484621 HNRNPUQ00839 825 aaKnown RBP eCLIP22.66■■□□□ 1.22
RNF38-207ENST00000484621 ANKRD18AQ8IVF6 992 aa22.66■■□□□ 1.22
RNF38-207ENST00000484621 NIM1KQ8IY84 436 aa22.66■■□□□ 1.22
RNF38-207ENST00000484621 TTLL11Q8NHH1 800 aa22.66■■□□□ 1.22
RNF38-207ENST00000484621 RTFDC1Q9BY42 306 aaPredicted RBP22.66■■□□□ 1.22
RNF38-207ENST00000484621 VPS33BQ9H267 617 aa22.66■■□□□ 1.22
RNF38-207ENST00000484621 NSFL1CQ9UNZ2 370 aaKnown RBP22.66■■□□□ 1.22
RNF38-207ENST00000484621 EIF6P56537 245 aaKnown RBP22.65■■□□□ 1.22
RNF38-207ENST00000484621 ALDH1L2Q3SY69 923 aa22.65■■□□□ 1.22
RNF38-207ENST00000484621 CDC5LQ99459 802 aaKnown RBP22.65■■□□□ 1.22
RNF38-207ENST00000484621 SMC4Q9NTJ3 1288 aa22.65■■□□□ 1.22
RNF38-207ENST00000484621 TRPM7Q96QT4 1865 aa22.64■■□□□ 1.22
RNF38-207ENST00000484621 PTPRCP08575 1304 aa22.64■■□□□ 1.22
RNF38-207ENST00000484621 CT47B1P0C2W7 299 aaPredicted RBP22.64■■□□□ 1.21
RNF38-207ENST00000484621 CASP7P55210 303 aa22.64■■□□□ 1.21
RNF38-207ENST00000484621 CST9Q5W186 159 aa22.64■■□□□ 1.21
RNF38-207ENST00000484621 PAXIP1Q6ZW49 1069 aaPredicted RBP22.64■■□□□ 1.21
RNF38-207ENST00000484621 SRCIN1Q9C0H9 1055 aa22.64■■□□□ 1.21
RNF38-207ENST00000484621 GREM2Q9H772 168 aa22.64■■□□□ 1.21
RNF38-207ENST00000484621 EPS15P42566 896 aa22.63■■□□□ 1.21
RNF38-207ENST00000484621 GPSM2P81274 684 aa22.63■■□□□ 1.21
RNF38-207ENST00000484621 PNMA8AQ86V59 439 aaPredicted RBP22.63■■□□□ 1.21
RNF38-207ENST00000484621 PLA2G12BQ9BX93 195 aa22.63■■□□□ 1.21
RNF38-207ENST00000484621 DUOX1Q9NRD9 1551 aa22.63■■□□□ 1.21
RNF38-207ENST00000484621 C6orf229H3BNL8 230 aa22.62■■□□□ 1.21
RNF38-207ENST00000484621 ALDH1L1O75891 902 aa22.62■■□□□ 1.21
RNF38-207ENST00000484621 SCNN1DP51172 638 aa22.62■■□□□ 1.21
RNF38-207ENST00000484621 C9orf78Q9NZ63 289 aaPredicted RBP22.62■■□□□ 1.21
RNF38-207ENST00000484621 GJA3Q9Y6H8 435 aa22.62■■□□□ 1.21
RNF38-207ENST00000484621 GRM8O00222 908 aa22.61■■□□□ 1.21
RNF38-207ENST00000484621 KIAA2012Q0VF49 1180 aa22.61■■□□□ 1.21
RNF38-207ENST00000484621 GPC2Q8N158 579 aa22.61■■□□□ 1.21
RNF38-207ENST00000484621 ANKIB1Q9P2G1 1089 aa22.61■■□□□ 1.21
RNF38-207ENST00000484621 CASP8AP2Q9UKL3 1982 aa22.61■■□□□ 1.21
RNF38-207ENST00000484621 RTL9Q8NET4 1388 aa22.61■■□□□ 1.21
RNF38-207ENST00000484621 GPR101Q96P66 508 aaPredicted RBP22.6■■□□□ 1.21
RNF38-207ENST00000484621 MCOLN1Q9GZU1 580 aa22.6■■□□□ 1.21
RNF38-207ENST00000484621 WASHC4Q2M389 1173 aa22.59■■□□□ 1.21
RNF38-207ENST00000484621 EYA3Q99504 573 aa22.59■■□□□ 1.21
RNF38-207ENST00000484621 POLLQ9UGP5 575 aa22.59■■□□□ 1.21
RNF38-207ENST00000484621 ZNRF3Q9ULT6 936 aa22.59■■□□□ 1.21
RNF38-207ENST00000484621 TNRC18O15417 2968 aaPredicted RBP22.58■■□□□ 1.21
RNF38-207ENST00000484621 RIMBP2O15034 1052 aa22.58■■□□□ 1.21
RNF38-207ENST00000484621 ITGA6P23229 1130 aa22.58■■□□□ 1.21
RNF38-207ENST00000484621 IGHMBP2P38935 993 aaKnown RBP22.58■■□□□ 1.21
RNF38-207ENST00000484621 GGA1Q9UJY5 639 aa22.58■■□□□ 1.21
RNF38-207ENST00000484621 CHMP3Q9Y3E7 222 aa22.58■■□□□ 1.21
RNF38-207ENST00000484621 UFL1O94874 794 aa22.57■■□□□ 1.2
RNF38-207ENST00000484621 CSF1RP07333 972 aa22.57■■□□□ 1.2
RNF38-207ENST00000484621 TBC1D16Q8TBP0 767 aa22.57■■□□□ 1.2
RNF38-207ENST00000484621 BSDC1Q9NW68 430 aaPredicted RBP22.57■■□□□ 1.2
RNF38-207ENST00000484621 PODXL2Q9NZ53 605 aa22.57■■□□□ 1.2
RNF38-207ENST00000484621 TLL2Q9Y6L7 1015 aa22.57■■□□□ 1.2
RNF38-207ENST00000484621 FOXO4P98177 505 aa22.56■■□□□ 1.2
RNF38-207ENST00000484621 XDHP47989 1333 aa22.56■■□□□ 1.2
RNF38-207ENST00000484621 ANKRD18BA2A2Z9 1011 aa22.55■■□□□ 1.2
RNF38-207ENST00000484621 MPHOSPH8Q99549 860 aa22.55■■□□□ 1.2
RNF38-207ENST00000484621 LMOD1P29536 600 aaPredicted RBP22.54■■□□□ 1.2
RNF38-207ENST00000484621 RARSP54136 660 aaKnown RBP22.54■■□□□ 1.2
RNF38-207ENST00000484621 CXCL9Q07325 125 aa22.54■■□□□ 1.2
RNF38-207ENST00000484621 IFIT5Q13325 482 aaKnown RBP22.54■■□□□ 1.2
RNF38-207ENST00000484621 LMBR1LQ6UX01 489 aa22.54■■□□□ 1.2
RNF38-207ENST00000484621 ZIC5Q96T25 663 aa22.54■■□□□ 1.2
RNF38-207ENST00000484621 ZC3H12CQ9C0D7 883 aaKnown RBP22.54■■□□□ 1.2
RNF38-207ENST00000484621 DBNDD1Q9H9R9 158 aa22.54■■□□□ 1.2
RNF38-207ENST00000484621 PCDH10Q9P2E7 1040 aa22.54■■□□□ 1.2
RNF38-207ENST00000484621 NOB1Q9ULX3 412 aaKnown RBP22.54■■□□□ 1.2
RNF38-207ENST00000484621 G3V3G9 751 aa22.53■■□□□ 1.2
RNF38-207ENST00000484621 RAD17O75943 681 aa22.53■■□□□ 1.2
RNF38-207ENST00000484621 ATP2B4P23634 1241 aa22.53■■□□□ 1.2
RNF38-207ENST00000484621 ECE1P42892 770 aa22.53■■□□□ 1.2
RNF38-207ENST00000484621 EPHA10Q5JZY3 1008 aa22.53■■□□□ 1.2
RNF38-207ENST00000484621 DCAF8Q5TAQ9 597 aa22.53■■□□□ 1.2
RNF38-207ENST00000484621 CIAPIN1Q6FI81 312 aa22.53■■□□□ 1.2
RNF38-207ENST00000484621 MINPP1Q9UNW1 487 aa22.53■■□□□ 1.2
RNF38-207ENST00000484621 NBPF7P0C2Y1 421 aaPredicted RBP22.52■■□□□ 1.2
RNF38-207ENST00000484621 TNIP1Q15025 636 aa22.52■■□□□ 1.2
RNF38-207ENST00000484621 DOK7Q18PE1 504 aa22.52■■□□□ 1.2
RNF38-207ENST00000484621 SUCLG2Q96I99 432 aa22.52■■□□□ 1.2
RNF38-207ENST00000484621 BEGAINQ9BUH8 593 aa22.52■■□□□ 1.2
RNF38-207ENST00000484621 YDJCA8MPS7 323 aa22.51■■□□□ 1.19
RNF38-207ENST00000484621 ECE2O60344 883 aa22.51■■□□□ 1.19
RNF38-207ENST00000484621 BRPF1P55201 1214 aaPredicted RBP22.51■■□□□ 1.19
RNF38-207ENST00000484621 CCDC57Q2TAC2 916 aa22.51■■□□□ 1.19
RNF38-207ENST00000484621 TAF7LQ5H9L4 462 aa22.51■■□□□ 1.19
RNF38-207ENST00000484621 DLK2Q6UY11 383 aa22.5■■□□□ 1.19
RNF38-207ENST00000484621 GLIS2Q9BZE0 524 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms