RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 TARSP26639 723 aaKnown RBP7.36□□□□□ -1.23
VPS13A-211ENST00000484581 WEE1P30291 646 aa7.36□□□□□ -1.23
VPS13A-211ENST00000484581 SERPINB4P48594 390 aa7.36□□□□□ -1.23
VPS13A-211ENST00000484581 TRPM4Q8TD43 1214 aa7.36□□□□□ -1.23
VPS13A-211ENST00000484581 TP53INP1Q96A56 240 aa7.36□□□□□ -1.23
VPS13A-211ENST00000484581 FRRS1LQ9P0K9 344 aa7.36□□□□□ -1.23
VPS13A-211ENST00000484581 KRTAP4-8A0A0G2JLE6 195 aa7.35□□□□□ -1.23
VPS13A-211ENST00000484581 WFDC8Q8IUA0 241 aa7.35□□□□□ -1.23
VPS13A-211ENST00000484581 DTWD1Q8N5C7 304 aa7.35□□□□□ -1.23
VPS13A-211ENST00000484581 IFT43Q96FT9 208 aa7.35□□□□□ -1.23
VPS13A-211ENST00000484581 QTRT2Q9H974 415 aaKnown RBP7.35□□□□□ -1.23
VPS13A-211ENST00000484581 ZFATQ9P243 1243 aa7.35□□□□□ -1.23
VPS13A-211ENST00000484581 ZBTB42B2RXF5 422 aa7.34□□□□□ -1.23
VPS13A-211ENST00000484581 IGSF3O75054 1194 aa7.34□□□□□ -1.23
VPS13A-211ENST00000484581 GRNP28799 593 aaKnown RBP7.34□□□□□ -1.23
VPS13A-211ENST00000484581 MLLT1Q03111 559 aaPredicted RBP7.34□□□□□ -1.23
VPS13A-211ENST00000484581 PERM1Q5SV97 790 aa7.34□□□□□ -1.23
VPS13A-211ENST00000484581 FBXO11Q86XK2 927 aa7.34□□□□□ -1.23
VPS13A-211ENST00000484581 LPIN3Q9BQK8 851 aa7.34□□□□□ -1.23
VPS13A-211ENST00000484581 GPLD1P80108 840 aa7.33□□□□□ -1.24
VPS13A-211ENST00000484581 TTC9Q92623 222 aa7.33□□□□□ -1.24
VPS13A-211ENST00000484581 MYO19Q96H55 970 aa7.33□□□□□ -1.24
VPS13A-211ENST00000484581 CXXC1Q9P0U4 656 aaPredicted RBP7.33□□□□□ -1.24
VPS13A-211ENST00000484581 EGFL7Q9UHF1 273 aa7.33□□□□□ -1.24
VPS13A-211ENST00000484581 RTCBQ9Y3I0 505 aaKnown RBP7.33□□□□□ -1.24
VPS13A-211ENST00000484581 LRP8Q14114 963 aa7.32□□□□□ -1.24
VPS13A-211ENST00000484581 HFE2Q6ZVN8 426 aa7.32□□□□□ -1.24
VPS13A-211ENST00000484581 ILDR2Q71H61 639 aa7.32□□□□□ -1.24
VPS13A-211ENST00000484581 CMTR1Q8N1G2 835 aaKnown RBP7.32□□□□□ -1.24
VPS13A-211ENST00000484581 SMG9Q9H0W8 520 aaKnown RBP7.32□□□□□ -1.24
VPS13A-211ENST00000484581 GOLGA2P5Q9HBQ8 144 aa7.32□□□□□ -1.24
VPS13A-211ENST00000484581 IGSF5Q9NSI5 407 aa7.32□□□□□ -1.24
VPS13A-211ENST00000484581 OPLAHO14841 1288 aa7.31□□□□□ -1.24
VPS13A-211ENST00000484581 XYLBO75191 536 aa7.31□□□□□ -1.24
VPS13A-211ENST00000484581 EIF2AK2P19525 551 aaKnown RBP7.31□□□□□ -1.24
VPS13A-211ENST00000484581 IREB2P48200 963 aaKnown RBP7.31□□□□□ -1.24
VPS13A-211ENST00000484581 NRLP54845 237 aa7.31□□□□□ -1.24
VPS13A-211ENST00000484581 GRIK5Q16478 980 aa7.31□□□□□ -1.24
VPS13A-211ENST00000484581 OCLNQ16625 522 aa7.31□□□□□ -1.24
VPS13A-211ENST00000484581 NOM1Q5C9Z4 860 aaKnown RBP7.31□□□□□ -1.24
VPS13A-211ENST00000484581 IGF2-ASQ6U949 168 aa7.31□□□□□ -1.24
VPS13A-211ENST00000484581 RGL4Q8IZJ4 473 aa7.31□□□□□ -1.24
VPS13A-211ENST00000484581 WFDC12Q8WWY7 111 aa7.31□□□□□ -1.24
VPS13A-211ENST00000484581 TLR7Q9NYK1 1049 aaKnown RBP7.31□□□□□ -1.24
VPS13A-211ENST00000484581 BIN2Q9UBW5 565 aaPredicted RBP7.31□□□□□ -1.24
VPS13A-211ENST00000484581 PRMT3O60678 531 aa7.3□□□□□ -1.24
VPS13A-211ENST00000484581 PSAPP07602 524 aa7.3□□□□□ -1.24
VPS13A-211ENST00000484581 TREML1Q86YW5 311 aa7.3□□□□□ -1.24
VPS13A-211ENST00000484581 USP20Q9Y2K6 914 aa7.3□□□□□ -1.24
VPS13A-211ENST00000484581 EGFRP00533 1210 aa7.29□□□□□ -1.24
VPS13A-211ENST00000484581 ZNF16P17020 682 aaPredicted RBP7.29□□□□□ -1.24
VPS13A-211ENST00000484581 PLAURQ03405 335 aa7.29□□□□□ -1.24
VPS13A-211ENST00000484581 MRRFQ96E11 262 aaKnown RBP7.29□□□□□ -1.24
VPS13A-211ENST00000484581 SSBP4Q9BWG4 385 aaPredicted RBP7.29□□□□□ -1.24
VPS13A-211ENST00000484581 BCL2L13Q9BXK5 485 aa7.29□□□□□ -1.24
VPS13A-211ENST00000484581 RBSNQ9H1K0 784 aa7.29□□□□□ -1.24
VPS13A-211ENST00000484581 LRFN2Q9ULH4 789 aa7.29□□□□□ -1.24
VPS13A-211ENST00000484581 LOC102724428A0A0B4J2F2 783 aa7.28□□□□□ -1.24
VPS13A-211ENST00000484581 HYAL3O43820 417 aaPredicted RBP7.28□□□□□ -1.24
VPS13A-211ENST00000484581 GHRHP01286 108 aa7.28□□□□□ -1.24
VPS13A-211ENST00000484581 SCNN1AP37088 669 aa7.28□□□□□ -1.24
VPS13A-211ENST00000484581 SIK1P57059 783 aa7.28□□□□□ -1.24
VPS13A-211ENST00000484581 NPAS4Q8IUM7 802 aa7.28□□□□□ -1.24
VPS13A-211ENST00000484581 PRIMPOLQ96LW4 560 aa7.28□□□□□ -1.24
VPS13A-211ENST00000484581 KIAA1522Q9P206 1035 aaPredicted RBP7.28□□□□□ -1.24
VPS13A-211ENST00000484581 H3BRB1 525 aa7.27□□□□□ -1.25
VPS13A-211ENST00000484581 J3QW42 95 aa7.27□□□□□ -1.25
VPS13A-211ENST00000484581 NOS3P29474 1203 aa7.27□□□□□ -1.25
VPS13A-211ENST00000484581 COX20Q5RI15 118 aa7.27□□□□□ -1.25
VPS13A-211ENST00000484581 PLD4Q96BZ4 506 aa7.27□□□□□ -1.25
VPS13A-211ENST00000484581 TUT1Q9H6E5 874 aaKnown RBP7.27□□□□□ -1.25
VPS13A-211ENST00000484581 ANKRD33BA6NCL7 494 aa7.26□□□□□ -1.25
VPS13A-211ENST00000484581 ICMTO60725 284 aa7.26□□□□□ -1.25
VPS13A-211ENST00000484581 ABL1P00519 1130 aa7.26□□□□□ -1.25
VPS13A-211ENST00000484581 ZNF211Q13398 564 aaPredicted RBP7.26□□□□□ -1.25
VPS13A-211ENST00000484581 GDF6Q6KF10 455 aaPredicted RBP7.26□□□□□ -1.25
VPS13A-211ENST00000484581 GLYCTKQ8IVS8 523 aa7.26□□□□□ -1.25
VPS13A-211ENST00000484581 IL22RA1Q8N6P7 574 aa7.26□□□□□ -1.25
VPS13A-211ENST00000484581 GIPC2Q8TF65 315 aa7.26□□□□□ -1.25
VPS13A-211ENST00000484581 NSUN5Q96P11 429 aaKnown RBP7.26□□□□□ -1.25
VPS13A-211ENST00000484581 LOC105371045A0A1W2PR82 267 aa7.25□□□□□ -1.25
VPS13A-211ENST00000484581 MMP20O60882 483 aa7.25□□□□□ -1.25
VPS13A-211ENST00000484581 DEAF1O75398 565 aaPredicted RBP7.25□□□□□ -1.25
VPS13A-211ENST00000484581 BRD2P25440 801 aaKnown RBP7.25□□□□□ -1.25
VPS13A-211ENST00000484581 FKBP5Q13451 457 aaPredicted RBP7.25□□□□□ -1.25
VPS13A-211ENST00000484581 DCAF11Q8TEB1 546 aa7.25□□□□□ -1.25
VPS13A-211ENST00000484581 DLL1O00548 723 aa7.24□□□□□ -1.25
VPS13A-211ENST00000484581 NLRP13Q86W25 1043 aa7.24□□□□□ -1.25
VPS13A-211ENST00000484581 MRPL18Q9H0U6 180 aaKnown RBP7.24□□□□□ -1.25
VPS13A-211ENST00000484581 AKTIPQ9H8T0 292 aa7.24□□□□□ -1.25
VPS13A-211ENST00000484581 FAM13BQ9NYF5 915 aa7.24□□□□□ -1.25
VPS13A-211ENST00000484581 KCNMB2Q9Y691 235 aa7.24□□□□□ -1.25
VPS13A-211ENST00000484581 PTCD1O75127 700 aaKnown RBP7.23□□□□□ -1.25
VPS13A-211ENST00000484581 VAMP1P23763 118 aa7.23□□□□□ -1.25
VPS13A-211ENST00000484581 SOX18P35713 384 aa7.23□□□□□ -1.25
VPS13A-211ENST00000484581 SF3B2Q13435 895 aaKnown RBP7.23□□□□□ -1.25
VPS13A-211ENST00000484581 ZNF326Q5BKZ1 582 aaKnown RBP7.23□□□□□ -1.25
VPS13A-211ENST00000484581 C16orf46Q6P387 395 aa7.23□□□□□ -1.25
VPS13A-211ENST00000484581 MAP4K3Q8IVH8 894 aa7.23□□□□□ -1.25
VPS13A-211ENST00000484581 PIK3R5Q8WYR1 880 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms