RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 MPHOSPH8Q99549 860 aa33.51■■■□□ 2.95
SMDT1-203ENST00000484235 VEGFAP15692 232 aaPredicted RBP33.5■■■□□ 2.95
SMDT1-203ENST00000484235 SMC1BQ8NDV3 1235 aa33.5■■■□□ 2.95
SMDT1-203ENST00000484235 BICC1Q9H694 974 aaKnown RBP33.5■■■□□ 2.95
SMDT1-203ENST00000484235 MINPP1Q9UNW1 487 aa33.5■■■□□ 2.95
SMDT1-203ENST00000484235 LRRC37AA6NMS7 1700 aa33.5■■■□□ 2.95
SMDT1-203ENST00000484235 POTECB2RU33 542 aa33.49■■■□□ 2.95
SMDT1-203ENST00000484235 AOC3Q16853 763 aa33.49■■■□□ 2.95
SMDT1-203ENST00000484235 RABL6Q3YEC7 729 aaPredicted RBP33.49■■■□□ 2.95
SMDT1-203ENST00000484235 CLUAP1Q96AJ1 413 aa33.49■■■□□ 2.95
SMDT1-203ENST00000484235 POLLQ9UGP5 575 aa33.49■■■□□ 2.95
SMDT1-203ENST00000484235 HDAC5Q9UQL6 1122 aa33.49■■■□□ 2.95
SMDT1-203ENST00000484235 DICER1Q9UPY3 1922 aaKnown RBP33.49■■■□□ 2.95
SMDT1-203ENST00000484235 C6orf229H3BNL8 230 aa33.48■■■□□ 2.95
SMDT1-203ENST00000484235 FZD9O00144 591 aa33.48■■■□□ 2.95
SMDT1-203ENST00000484235 KIAA2012Q0VF49 1180 aa33.48■■■□□ 2.95
SMDT1-203ENST00000484235 TBC1D16Q8TBP0 767 aa33.48■■■□□ 2.95
SMDT1-203ENST00000484235 TNNQ9UQP3 1299 aa33.48■■■□□ 2.95
SMDT1-203ENST00000484235 UBTFL1P0CB47 393 aaPredicted RBP33.47■■■□□ 2.95
SMDT1-203ENST00000484235 XDHP47989 1333 aa33.47■■■□□ 2.95
SMDT1-203ENST00000484235 WASHC4Q2M389 1173 aa33.46■■■□□ 2.95
SMDT1-203ENST00000484235 NIM1KQ8IY84 436 aa33.46■■■□□ 2.95
SMDT1-203ENST00000484235 ANKRD44Q8N8A2 993 aa33.46■■■□□ 2.95
SMDT1-203ENST00000484235 YTHDC1Q96MU7 727 aaKnown RBP33.46■■■□□ 2.95
SMDT1-203ENST00000484235 EYA3Q99504 573 aa33.46■■■□□ 2.95
SMDT1-203ENST00000484235 GGA1Q9UJY5 639 aa33.46■■■□□ 2.95
SMDT1-203ENST00000484235 RCAN3Q9UKA8 241 aa33.46■■■□□ 2.95
SMDT1-203ENST00000484235 TIAM2Q8IVF5 1701 aa33.45■■■□□ 2.94
SMDT1-203ENST00000484235 TAF7LQ5H9L4 462 aa33.44■■■□□ 2.94
SMDT1-203ENST00000484235 UFL1O94874 794 aa33.43■■■□□ 2.94
SMDT1-203ENST00000484235 ANKRD2Q9GZV1 360 aa33.43■■■□□ 2.94
SMDT1-203ENST00000484235 DUOX1Q9NRD9 1551 aa33.43■■■□□ 2.94
SMDT1-203ENST00000484235 GNAI3P08754 354 aa33.42■■■□□ 2.94
SMDT1-203ENST00000484235 ATP2B4P23634 1241 aa33.42■■■□□ 2.94
SMDT1-203ENST00000484235 EIF6P56537 245 aaKnown RBP33.42■■■□□ 2.94
SMDT1-203ENST00000484235 FTSJ3Q8IY81 847 aaKnown RBP33.42■■■□□ 2.94
SMDT1-203ENST00000484235 DZIP1LQ8IYY4 767 aaKnown RBP33.42■■■□□ 2.94
SMDT1-203ENST00000484235 MEIS3Q99687 375 aa33.42■■■□□ 2.94
SMDT1-203ENST00000484235 ZNRF3Q9ULT6 936 aa33.42■■■□□ 2.94
SMDT1-203ENST00000484235 DDNO94850 711 aaPredicted RBP33.41■■■□□ 2.94
SMDT1-203ENST00000484235 LDHAL6AQ6ZMR3 332 aa33.41■■■□□ 2.94
SMDT1-203ENST00000484235 TMEM57Q8N5G2 664 aa33.41■■■□□ 2.94
SMDT1-203ENST00000484235 ZNF594Q96JF6 807 aaPredicted RBP33.41■■■□□ 2.94
SMDT1-203ENST00000484235 ZC3H12CQ9C0D7 883 aaKnown RBP33.41■■■□□ 2.94
SMDT1-203ENST00000484235 COL4A5P29400 1685 aa33.4■■■□□ 2.94
SMDT1-203ENST00000484235 ZNF541Q9H0D2 1346 aa33.4■■■□□ 2.94
SMDT1-203ENST00000484235 RIMBP2O15034 1052 aa33.4■■■□□ 2.94
SMDT1-203ENST00000484235 CHRNDQ07001 517 aa33.38■■■□□ 2.93
SMDT1-203ENST00000484235 LEMD3Q9Y2U8 911 aa33.38■■■□□ 2.93
SMDT1-203ENST00000484235 LRRFIP2Q9Y608 721 aaKnown RBP33.38■■■□□ 2.93
SMDT1-203ENST00000484235 LTBP1Q14766 1721 aa33.38■■■□□ 2.93
SMDT1-203ENST00000484235 GPC2Q8N158 579 aa33.37■■■□□ 2.93
SMDT1-203ENST00000484235 GPR101Q96P66 508 aaPredicted RBP33.37■■■□□ 2.93
SMDT1-203ENST00000484235 CNNM1Q9NRU3 951 aa33.37■■■□□ 2.93
SMDT1-203ENST00000484235 MS4A1P11836 297 aa33.36■■■□□ 2.93
SMDT1-203ENST00000484235 WTIPA6NIX2 430 aaPredicted RBP33.34■■■□□ 2.93
SMDT1-203ENST00000484235 RLBP1P12271 317 aa33.34■■■□□ 2.93
SMDT1-203ENST00000484235 L3MBTL3Q96JM7 780 aaPredicted RBP33.34■■■□□ 2.93
SMDT1-203ENST00000484235 CXCL9Q07325 125 aa33.33■■■□□ 2.93
SMDT1-203ENST00000484235 ZNF804BA4D1E1 1349 aa33.32■■■□□ 2.93
SMDT1-203ENST00000484235 DOK7Q18PE1 504 aa33.32■■■□□ 2.92
SMDT1-203ENST00000484235 DBNDD1Q9H9R9 158 aa33.32■■■□□ 2.92
SMDT1-203ENST00000484235 RIPOR2Q9Y4F9 1068 aa33.32■■■□□ 2.92
SMDT1-203ENST00000484235 GJA3Q9Y6H8 435 aa33.32■■■□□ 2.92
SMDT1-203ENST00000484235 PCNTO95613 3336 aa33.32■■■□□ 2.92
SMDT1-203ENST00000484235 G3V3G9 751 aa33.31■■■□□ 2.92
SMDT1-203ENST00000484235 GNAI2P04899 355 aa33.31■■■□□ 2.92
SMDT1-203ENST00000484235 DCAF8Q5TAQ9 597 aa33.31■■■□□ 2.92
SMDT1-203ENST00000484235 ITPRIPQ8IWB1 547 aa33.31■■■□□ 2.92
SMDT1-203ENST00000484235 HELBQ8NG08 1087 aaPredicted RBP33.31■■■□□ 2.92
SMDT1-203ENST00000484235 PUS3Q9BZE2 481 aaKnown RBP33.31■■■□□ 2.92
SMDT1-203ENST00000484235 SPEF2Q9C093 1822 aa33.3■■■□□ 2.92
SMDT1-203ENST00000484235 YDJCA8MPS7 323 aa33.3■■■□□ 2.92
SMDT1-203ENST00000484235 TAF5LO75529 589 aa33.3■■■□□ 2.92
SMDT1-203ENST00000484235 KCNJ4P48050 445 aa33.3■■■□□ 2.92
SMDT1-203ENST00000484235 RFX5P48382 616 aaPredicted RBP33.3■■■□□ 2.92
SMDT1-203ENST00000484235 TNIP1Q15025 636 aa33.3■■■□□ 2.92
SMDT1-203ENST00000484235 COL13A1Q5TAT6 717 aaPredicted RBP33.3■■■□□ 2.92
SMDT1-203ENST00000484235 IQCA1LA6NCM1 817 aa33.29■■■□□ 2.92
SMDT1-203ENST00000484235 ECE2O60344 883 aa33.29■■■□□ 2.92
SMDT1-203ENST00000484235 CIAPIN1Q6FI81 312 aa33.29■■■□□ 2.92
SMDT1-203ENST00000484235 PANK1Q8TE04 598 aa33.29■■■□□ 2.92
SMDT1-203ENST00000484235 MED23Q9ULK4 1368 aa33.29■■■□□ 2.92
SMDT1-203ENST00000484235 RAD17O75943 681 aa33.28■■■□□ 2.92
SMDT1-203ENST00000484235 KLHDC4Q8TBB5 520 aa33.28■■■□□ 2.92
SMDT1-203ENST00000484235 MROH5Q6ZUA9 1318 aa33.28■■■□□ 2.92
SMDT1-203ENST00000484235 ZBTB7BO15156 539 aaPredicted RBP33.27■■■□□ 2.92
SMDT1-203ENST00000484235 PLIN1O60240 522 aa33.27■■■□□ 2.92
SMDT1-203ENST00000484235 PTPN12Q05209 780 aaKnown RBP33.27■■■□□ 2.92
SMDT1-203ENST00000484235 LRRC24Q50LG9 513 aa33.26■■■□□ 2.91
SMDT1-203ENST00000484235 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.26■■■□□ 2.91
SMDT1-203ENST00000484235 MTX1Q13505 466 aa33.25■■■□□ 2.91
SMDT1-203ENST00000484235 PODNQ7Z5L7 613 aa33.25■■■□□ 2.91
SMDT1-203ENST00000484235 C15orf52Q6ZUT6 534 aaKnown RBP33.24■■■□□ 2.91
SMDT1-203ENST00000484235 HACL1Q9UJ83 578 aa33.24■■■□□ 2.91
SMDT1-203ENST00000484235 SNAP23O00161 211 aa33.23■■■□□ 2.91
SMDT1-203ENST00000484235 EYA2O00167 538 aa33.23■■■□□ 2.91
SMDT1-203ENST00000484235 POTEIP0CG38 1075 aa33.23■■■□□ 2.91
SMDT1-203ENST00000484235 POTEJP0CG39 1038 aa33.23■■■□□ 2.91
SMDT1-203ENST00000484235 TXNRD3Q86VQ6 643 aa33.23■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms