RNA–Protein interactions for RNA: ENST00000484184.1

DNMT3A-213, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-213ENST00000484184 VIL1P09327 827 aaKnown RBP16.72■□□□□ 0.27
DNMT3A-213ENST00000484184 RIPK4P57078 832 aa16.72■□□□□ 0.27
DNMT3A-213ENST00000484184 DDX10Q13206 875 aaKnown RBP16.72■□□□□ 0.27
DNMT3A-213ENST00000484184 KIF4BQ2VIQ3 1234 aa16.72■□□□□ 0.27
DNMT3A-213ENST00000484184 TBC1D16Q8TBP0 767 aa16.72■□□□□ 0.27
DNMT3A-213ENST00000484184 GGA3Q9NZ52 723 aa16.72■□□□□ 0.27
DNMT3A-213ENST00000484184 CTU1Q7Z7A3 348 aaKnown RBP16.71■□□□□ 0.27
DNMT3A-213ENST00000484184 PLBD2Q8NHP8 589 aa16.71■□□□□ 0.27
DNMT3A-213ENST00000484184 CDCA5Q96FF9 252 aa16.71■□□□□ 0.27
DNMT3A-213ENST00000484184 PNNQ9H307 717 aaKnown RBP16.71■□□□□ 0.27
DNMT3A-213ENST00000484184 RASAL3Q86YV0 1011 aa16.7■□□□□ 0.26
DNMT3A-213ENST00000484184 SULF1Q8IWU6 871 aa16.7■□□□□ 0.26
DNMT3A-213ENST00000484184 CHPF2Q9P2E5 772 aa16.7■□□□□ 0.26
DNMT3A-213ENST00000484184 ZNF609O15014 1411 aa16.7■□□□□ 0.26
DNMT3A-213ENST00000484184 ATP5J2-PTCD1G3V325 749 aa16.69■□□□□ 0.26
DNMT3A-213ENST00000484184 CHL1O00533 1208 aa16.69■□□□□ 0.26
DNMT3A-213ENST00000484184 TMPOP42166 694 aaKnown RBP16.69■□□□□ 0.26
DNMT3A-213ENST00000484184 ZNF280AP59817 542 aaPredicted RBP16.69■□□□□ 0.26
DNMT3A-213ENST00000484184 PRPF38BQ5VTL8 546 aaKnown RBP16.69■□□□□ 0.26
DNMT3A-213ENST00000484184 PODXL2Q9NZ53 605 aa16.69■□□□□ 0.26
DNMT3A-213ENST00000484184 RPS8P62241 208 aaKnown RBP16.68■□□□□ 0.26
DNMT3A-213ENST00000484184 ANKRD13DQ6ZTN6 518 aa16.68■□□□□ 0.26
DNMT3A-213ENST00000484184 EYA3Q99504 573 aa16.68■□□□□ 0.26
DNMT3A-213ENST00000484184 HPS5Q9UPZ3 1129 aa16.68■□□□□ 0.26
DNMT3A-213ENST00000484184 PSME4Q14997 1843 aa16.68■□□□□ 0.26
DNMT3A-213ENST00000484184 TRIM28Q13263 835 aaKnown RBP16.67■□□□□ 0.26
DNMT3A-213ENST00000484184 ANGEL2Q5VTE6 544 aaKnown RBP16.67■□□□□ 0.26
DNMT3A-213ENST00000484184 GMLQ99445 158 aa16.67■□□□□ 0.26
DNMT3A-213ENST00000484184 ZC3H12CQ9C0D7 883 aaKnown RBP16.67■□□□□ 0.26
DNMT3A-213ENST00000484184 IRS4O14654 1257 aaPredicted RBP16.66■□□□□ 0.26
DNMT3A-213ENST00000484184 FKBP1BP68106 108 aa16.66■□□□□ 0.26
DNMT3A-213ENST00000484184 SCARF1Q14162 830 aa16.66■□□□□ 0.26
DNMT3A-213ENST00000484184 RTL5Q5HYW3 569 aaPredicted RBP16.66■□□□□ 0.26
DNMT3A-213ENST00000484184 REM2Q8IYK8 340 aaPredicted RBP16.66■□□□□ 0.26
DNMT3A-213ENST00000484184 SEC31BQ9NQW1 1179 aa16.66■□□□□ 0.26
DNMT3A-213ENST00000484184 PAPPA2Q9BXP8 1791 aa16.66■□□□□ 0.26
DNMT3A-213ENST00000484184 RSBN1LQ6PCB5 846 aaPredicted RBP16.65■□□□□ 0.26
DNMT3A-213ENST00000484184 MOB2Q70IA6 237 aa16.65■□□□□ 0.26
DNMT3A-213ENST00000484184 AGBL3Q8NEM8 1001 aa16.65■□□□□ 0.26
DNMT3A-213ENST00000484184 HDGFL1Q5TGJ6 251 aa16.64■□□□□ 0.25
DNMT3A-213ENST00000484184 ZNF296Q8WUU4 475 aaPredicted RBP16.64■□□□□ 0.25
DNMT3A-213ENST00000484184 UFL1O94874 794 aa16.63■□□□□ 0.25
DNMT3A-213ENST00000484184 TBC1D8O95759 1140 aa16.63■□□□□ 0.25
DNMT3A-213ENST00000484184 LMOD3Q0VAK6 560 aa16.63■□□□□ 0.25
DNMT3A-213ENST00000484184 DBF4Q9UBU7 674 aaPredicted RBP16.63■□□□□ 0.25
DNMT3A-213ENST00000484184 SCAF8Q9UPN6 1271 aaKnown RBP16.63■□□□□ 0.25
DNMT3A-213ENST00000484184 TRIM35Q9UPQ4 493 aa16.63■□□□□ 0.25
DNMT3A-213ENST00000484184 PITPNM2Q9BZ72 1349 aa16.63■□□□□ 0.25
DNMT3A-213ENST00000484184 HTTP42858 3142 aa16.62■□□□□ 0.25
DNMT3A-213ENST00000484184 HOXB7P09629 217 aa16.62■□□□□ 0.25
DNMT3A-213ENST00000484184 PKN2Q16513 984 aaKnown RBP16.62■□□□□ 0.25
DNMT3A-213ENST00000484184 MYOZ2Q9NPC6 264 aa16.62■□□□□ 0.25
DNMT3A-213ENST00000484184 GGA1Q9UJY5 639 aa16.62■□□□□ 0.25
DNMT3A-213ENST00000484184 MKI67P46013 3256 aaKnown RBP16.62■□□□□ 0.25
DNMT3A-213ENST00000484184 UBE2Q2LH0YL09 131 aa16.61■□□□□ 0.25
DNMT3A-213ENST00000484184 USP17L8P0C7I0 530 aa16.61■□□□□ 0.25
DNMT3A-213ENST00000484184 TM4SF4P48230 202 aa16.61■□□□□ 0.25
DNMT3A-213ENST00000484184 PRAMEF18Q5VWM3 479 aa16.61■□□□□ 0.25
DNMT3A-213ENST00000484184 ZBTB38Q8NAP3 1195 aaPredicted RBP16.61■□□□□ 0.25
DNMT3A-213ENST00000484184 HYPKQ9NX55 129 aa16.61■□□□□ 0.25
DNMT3A-213ENST00000484184 ANKIB1Q9P2G1 1089 aa16.61■□□□□ 0.25
DNMT3A-213ENST00000484184 WTIPA6NIX2 430 aaPredicted RBP16.6■□□□□ 0.25
DNMT3A-213ENST00000484184 NOM1Q5C9Z4 860 aaKnown RBP16.6■□□□□ 0.25
DNMT3A-213ENST00000484184 ZNF646O15015 1829 aaPredicted RBP16.6■□□□□ 0.25
DNMT3A-213ENST00000484184 KIAA0100Q14667 2235 aaKnown RBP16.6■□□□□ 0.25
DNMT3A-213ENST00000484184 GPR25O00155 361 aa16.59■□□□□ 0.25
DNMT3A-213ENST00000484184 NEUROD2Q15784 382 aa16.59■□□□□ 0.25
DNMT3A-213ENST00000484184 NBPF9Q3BBW0 867 aa16.59■□□□□ 0.25
DNMT3A-213ENST00000484184 HDAC9Q9UKV0 1011 aa16.59■□□□□ 0.25
DNMT3A-213ENST00000484184 USP17L3A6NCW0 530 aa16.58■□□□□ 0.24
DNMT3A-213ENST00000484184 USP17L4A6NCW7 530 aa16.58■□□□□ 0.24
DNMT3A-213ENST00000484184 G3V3G9 751 aa16.58■□□□□ 0.24
DNMT3A-213ENST00000484184 DCAF8Q5TAQ9 597 aa16.58■□□□□ 0.24
DNMT3A-213ENST00000484184 DUSP27Q5VZP5 1158 aa16.58■□□□□ 0.24
DNMT3A-213ENST00000484184 USP17L1Q7RTZ2 530 aa16.58■□□□□ 0.24
DNMT3A-213ENST00000484184 PODNQ7Z5L7 613 aa16.58■□□□□ 0.24
DNMT3A-213ENST00000484184 CCDC146Q8IYE0 955 aa16.58■□□□□ 0.24
DNMT3A-213ENST00000484184 R3HDMLQ9H3Y0 253 aa16.58■□□□□ 0.24
DNMT3A-213ENST00000484184 LAS1LQ9Y4W2 734 aaKnown RBP16.58■□□□□ 0.24
DNMT3A-213ENST00000484184 XDHP47989 1333 aa16.58■□□□□ 0.24
DNMT3A-213ENST00000484184 PCCAP05165 728 aaPredicted RBP16.57■□□□□ 0.24
DNMT3A-213ENST00000484184 RALBP1Q15311 655 aa16.57■□□□□ 0.24
DNMT3A-213ENST00000484184 FBXO46Q6PJ61 603 aaPredicted RBP16.57■□□□□ 0.24
DNMT3A-213ENST00000484184 JARID2Q92833 1246 aaPredicted RBP16.57■□□□□ 0.24
DNMT3A-213ENST00000484184 CFHR5Q9BXR6 569 aa16.57■□□□□ 0.24
DNMT3A-213ENST00000484184 PHAXQ9H814 394 aaKnown RBP16.57■□□□□ 0.24
DNMT3A-213ENST00000484184 CCDC152Q4G0S7 254 aa16.56■□□□□ 0.24
DNMT3A-213ENST00000484184 CCDC85AQ96PX6 553 aaPredicted RBP16.56■□□□□ 0.24
DNMT3A-213ENST00000484184 MXD3Q9BW11 206 aa16.56■□□□□ 0.24
DNMT3A-213ENST00000484184 CENPFP49454 3210 aa16.55■□□□□ 0.24
DNMT3A-213ENST00000484184 WNT10BO00744 389 aa16.55■□□□□ 0.24
DNMT3A-213ENST00000484184 PDE8AO60658 829 aa16.55■□□□□ 0.24
DNMT3A-213ENST00000484184 ATP2B4P23634 1241 aa16.55■□□□□ 0.24
DNMT3A-213ENST00000484184 DACT2Q5SW24 774 aa16.55■□□□□ 0.24
DNMT3A-213ENST00000484184 RIC3Q7Z5B4 369 aa16.55■□□□□ 0.24
DNMT3A-213ENST00000484184 CCDC191Q8NCU4 936 aa16.55■□□□□ 0.24
DNMT3A-213ENST00000484184 HSP90B1P14625 803 aaKnown RBP16.54■□□□□ 0.24
DNMT3A-213ENST00000484184 PTPN12Q05209 780 aaKnown RBP16.54■□□□□ 0.24
DNMT3A-213ENST00000484184 MKRN3Q13064 507 aaKnown RBP16.54■□□□□ 0.24
DNMT3A-213ENST00000484184 ANKRD18AQ8IVF6 992 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms