RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 HSP90AB3PQ58FF7 597 aa11.37□□□□□ -0.59
RTFDC1-208ENST00000484084 RBM26Q5T8P6 1007 aaKnown RBP11.37□□□□□ -0.59
RTFDC1-208ENST00000484084 RASAL3Q86YV0 1011 aa11.37□□□□□ -0.59
RTFDC1-208ENST00000484084 CDCA5Q96FF9 252 aa11.37□□□□□ -0.59
RTFDC1-208ENST00000484084 GMLQ99445 158 aa11.37□□□□□ -0.59
RTFDC1-208ENST00000484084 TMX4Q9H1E5 349 aaPredicted RBP11.37□□□□□ -0.59
RTFDC1-208ENST00000484084 BRCA2P51587 3418 aa11.37□□□□□ -0.59
RTFDC1-208ENST00000484084 WTIPA6NIX2 430 aaPredicted RBP11.36□□□□□ -0.59
RTFDC1-208ENST00000484084 RIPK4P57078 832 aa11.36□□□□□ -0.59
RTFDC1-208ENST00000484084 KIF4BQ2VIQ3 1234 aa11.36□□□□□ -0.59
RTFDC1-208ENST00000484084 MOB2Q70IA6 237 aa11.36□□□□□ -0.59
RTFDC1-208ENST00000484084 C2orf69Q8N8R5 385 aa11.36□□□□□ -0.59
RTFDC1-208ENST00000484084 GGA3Q9NZ52 723 aa11.36□□□□□ -0.59
RTFDC1-208ENST00000484084 CHPF2Q9P2E5 772 aa11.36□□□□□ -0.59
RTFDC1-208ENST00000484084 ATP5J2-PTCD1G3V325 749 aa11.35□□□□□ -0.59
RTFDC1-208ENST00000484084 TMPOP42166 694 aaKnown RBP11.35□□□□□ -0.59
RTFDC1-208ENST00000484084 PLBD2Q8NHP8 589 aa11.35□□□□□ -0.59
RTFDC1-208ENST00000484084 DCPSQ96C86 337 aaKnown RBP11.35□□□□□ -0.59
RTFDC1-208ENST00000484084 PODXL2Q9NZ53 605 aa11.35□□□□□ -0.59
RTFDC1-208ENST00000484084 SCAF8Q9UPN6 1271 aaKnown RBP11.35□□□□□ -0.59
RTFDC1-208ENST00000484084 TRIM35Q9UPQ4 493 aa11.35□□□□□ -0.59
RTFDC1-208ENST00000484084 HPS5Q9UPZ3 1129 aa11.35□□□□□ -0.59
RTFDC1-208ENST00000484084 PAPPA2Q9BXP8 1791 aa11.34□□□□□ -0.59
RTFDC1-208ENST00000484084 TRIM28Q13263 835 aaKnown RBP11.34□□□□□ -0.59
RTFDC1-208ENST00000484084 ANGEL2Q5VTE6 544 aaKnown RBP11.34□□□□□ -0.59
RTFDC1-208ENST00000484084 CTU1Q7Z7A3 348 aaKnown RBP11.34□□□□□ -0.59
RTFDC1-208ENST00000484084 SEC31BQ9NQW1 1179 aa11.34□□□□□ -0.59
RTFDC1-208ENST00000484084 CENPFP49454 3210 aa11.34□□□□□ -0.59
RTFDC1-208ENST00000484084 C6orf229H3BNL8 230 aa11.33□□□□□ -0.6
RTFDC1-208ENST00000484084 RPS8P62241 208 aaKnown RBP11.33□□□□□ -0.6
RTFDC1-208ENST00000484084 SCARF1Q14162 830 aa11.33□□□□□ -0.6
RTFDC1-208ENST00000484084 RTL5Q5HYW3 569 aaPredicted RBP11.33□□□□□ -0.6
RTFDC1-208ENST00000484084 PRPF38BQ5VTL8 546 aaKnown RBP11.33□□□□□ -0.6
RTFDC1-208ENST00000484084 ANKRD13DQ6ZTN6 518 aa11.33□□□□□ -0.6
RTFDC1-208ENST00000484084 SULF1Q8IWU6 871 aa11.32□□□□□ -0.6
RTFDC1-208ENST00000484084 ZNF296Q8WUU4 475 aaPredicted RBP11.32□□□□□ -0.6
RTFDC1-208ENST00000484084 R3HDMLQ9H3Y0 253 aa11.32□□□□□ -0.6
RTFDC1-208ENST00000484084 MAPK8IP3Q9UPT6 1336 aa11.32□□□□□ -0.6
RTFDC1-208ENST00000484084 IRS4O14654 1257 aaPredicted RBP11.31□□□□□ -0.6
RTFDC1-208ENST00000484084 TBC1D8O95759 1140 aa11.31□□□□□ -0.6
RTFDC1-208ENST00000484084 NEFMP07197 916 aa11.31□□□□□ -0.6
RTFDC1-208ENST00000484084 TM4SF4P48230 202 aa11.31□□□□□ -0.6
RTFDC1-208ENST00000484084 PRAMEF18Q5VWM3 479 aa11.31□□□□□ -0.6
RTFDC1-208ENST00000484084 RSBN1LQ6PCB5 846 aaPredicted RBP11.31□□□□□ -0.6
RTFDC1-208ENST00000484084 AGBL3Q8NEM8 1001 aa11.31□□□□□ -0.6
RTFDC1-208ENST00000484084 UBE2Q2LH0YL09 131 aa11.3□□□□□ -0.6
RTFDC1-208ENST00000484084 FKBP1BP68106 108 aa11.3□□□□□ -0.6
RTFDC1-208ENST00000484084 NBPF9Q3BBW0 867 aa11.3□□□□□ -0.6
RTFDC1-208ENST00000484084 REM2Q8IYK8 340 aaPredicted RBP11.3□□□□□ -0.6
RTFDC1-208ENST00000484084 EYA3Q99504 573 aa11.3□□□□□ -0.6
RTFDC1-208ENST00000484084 MXD3Q9BW11 206 aa11.3□□□□□ -0.6
RTFDC1-208ENST00000484084 ZC3H12CQ9C0D7 883 aaKnown RBP11.3□□□□□ -0.6
RTFDC1-208ENST00000484084 MYOZ2Q9NPC6 264 aa11.3□□□□□ -0.6
RTFDC1-208ENST00000484084 PITPNM2Q9BZ72 1349 aa11.3□□□□□ -0.6
RTFDC1-208ENST00000484084 LAMB1P07942 1786 aa11.29□□□□□ -0.6
RTFDC1-208ENST00000484084 UFL1O94874 794 aa11.29□□□□□ -0.6
RTFDC1-208ENST00000484084 USP17L8P0C7I0 530 aa11.29□□□□□ -0.6
RTFDC1-208ENST00000484084 NOM1Q5C9Z4 860 aaKnown RBP11.29□□□□□ -0.6
RTFDC1-208ENST00000484084 HDGFL1Q5TGJ6 251 aa11.29□□□□□ -0.6
RTFDC1-208ENST00000484084 ZBTB38Q8NAP3 1195 aaPredicted RBP11.29□□□□□ -0.6
RTFDC1-208ENST00000484084 JARID2Q92833 1246 aaPredicted RBP11.29□□□□□ -0.6
RTFDC1-208ENST00000484084 CFHR5Q9BXR6 569 aa11.29□□□□□ -0.6
RTFDC1-208ENST00000484084 PNNQ9H307 717 aaKnown RBP11.29□□□□□ -0.6
RTFDC1-208ENST00000484084 DBF4Q9UBU7 674 aaPredicted RBP11.29□□□□□ -0.6
RTFDC1-208ENST00000484084 HOXB7P09629 217 aa11.28□□□□□ -0.6
RTFDC1-208ENST00000484084 DACT2Q5SW24 774 aa11.28□□□□□ -0.6
RTFDC1-208ENST00000484084 CCDC146Q8IYE0 955 aa11.28□□□□□ -0.6
RTFDC1-208ENST00000484084 PHAXQ9H814 394 aaKnown RBP11.28□□□□□ -0.6
RTFDC1-208ENST00000484084 GPR25O00155 361 aa11.27□□□□□ -0.61
RTFDC1-208ENST00000484084 ZNF853P0CG23 659 aa11.27□□□□□ -0.61
RTFDC1-208ENST00000484084 PKN2Q16513 984 aaKnown RBP11.27□□□□□ -0.61
RTFDC1-208ENST00000484084 TXNRD3Q86VQ6 643 aa11.27□□□□□ -0.61
RTFDC1-208ENST00000484084 HYPKQ9NX55 129 aa11.27□□□□□ -0.61
RTFDC1-208ENST00000484084 GGA1Q9UJY5 639 aa11.27□□□□□ -0.61
RTFDC1-208ENST00000484084 WNT10BO00744 389 aa11.26□□□□□ -0.61
RTFDC1-208ENST00000484084 CAP1Q01518 475 aa11.26□□□□□ -0.61
RTFDC1-208ENST00000484084 NEUROD2Q15784 382 aa11.26□□□□□ -0.61
RTFDC1-208ENST00000484084 LDLRAD1Q5T700 205 aa11.26□□□□□ -0.61
RTFDC1-208ENST00000484084 DUSP27Q5VZP5 1158 aa11.26□□□□□ -0.61
RTFDC1-208ENST00000484084 PODNQ7Z5L7 613 aa11.26□□□□□ -0.61
RTFDC1-208ENST00000484084 ZBED3Q96IU2 234 aaPredicted RBP11.26□□□□□ -0.61
RTFDC1-208ENST00000484084 CCDC85AQ96PX6 553 aaPredicted RBP11.26□□□□□ -0.61
RTFDC1-208ENST00000484084 MBIPQ9NS73 344 aa11.26□□□□□ -0.61
RTFDC1-208ENST00000484084 ANKIB1Q9P2G1 1089 aa11.26□□□□□ -0.61
RTFDC1-208ENST00000484084 SPEF2Q9C093 1822 aa11.25□□□□□ -0.61
RTFDC1-208ENST00000484084 SSC5DA1L4H1 1573 aa11.25□□□□□ -0.61
RTFDC1-208ENST00000484084 USP17L3A6NCW0 530 aa11.25□□□□□ -0.61
RTFDC1-208ENST00000484084 USP17L4A6NCW7 530 aa11.25□□□□□ -0.61
RTFDC1-208ENST00000484084 PCCAP05165 728 aaPredicted RBP11.25□□□□□ -0.61
RTFDC1-208ENST00000484084 PTPN12Q05209 780 aaKnown RBP11.25□□□□□ -0.61
RTFDC1-208ENST00000484084 LMOD3Q0VAK6 560 aa11.25□□□□□ -0.61
RTFDC1-208ENST00000484084 FBXO46Q6PJ61 603 aaPredicted RBP11.25□□□□□ -0.61
RTFDC1-208ENST00000484084 USP17L1Q7RTZ2 530 aa11.25□□□□□ -0.61
RTFDC1-208ENST00000484084 FZD1Q9UP38 647 aa11.25□□□□□ -0.61
RTFDC1-208ENST00000484084 LAS1LQ9Y4W2 734 aaKnown RBP11.25□□□□□ -0.61
RTFDC1-208ENST00000484084 XDHP47989 1333 aa11.25□□□□□ -0.61
RTFDC1-208ENST00000484084 RBBP6Q7Z6E9 1792 aaKnown RBP11.25□□□□□ -0.61
RTFDC1-208ENST00000484084 PDE8AO60658 829 aa11.24□□□□□ -0.61
RTFDC1-208ENST00000484084 KLRK1P26718 216 aa11.24□□□□□ -0.61
RTFDC1-208ENST00000484084 MKRN3Q13064 507 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms