RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-210ENST00000484077 PIK3R2O00459 728 aa9.55□□□□□ -0.88
RIF1-210ENST00000484077 BTLAQ7Z6A9 289 aa9.55□□□□□ -0.88
RIF1-210ENST00000484077 COL26A1Q96A83 441 aa9.55□□□□□ -0.88
RIF1-210ENST00000484077 HSH2DQ96JZ2 352 aa9.55□□□□□ -0.88
RIF1-210ENST00000484077 C11orf16Q9NQ32 467 aa9.55□□□□□ -0.88
RIF1-210ENST00000484077 STRN4Q9NRL3 753 aa9.55□□□□□ -0.88
RIF1-210ENST00000484077 KCNH4Q9UQ05 1017 aa9.55□□□□□ -0.88
RIF1-210ENST00000484077 NEURL1BA8MQ27 555 aa9.54□□□□□ -0.88
RIF1-210ENST00000484077 SHISA8B8ZZ34 492 aa9.54□□□□□ -0.88
RIF1-210ENST00000484077 SIN3BO75182 1162 aa9.54□□□□□ -0.88
RIF1-210ENST00000484077 C1orf229Q6ZS94 237 aaPredicted RBP9.54□□□□□ -0.88
RIF1-210ENST00000484077 ZNF280CQ8ND82 737 aa9.54□□□□□ -0.88
RIF1-210ENST00000484077 CFDP1Q9UEE9 299 aaPredicted RBP9.54□□□□□ -0.88
RIF1-210ENST00000484077 MAST1Q9Y2H9 1570 aa9.54□□□□□ -0.88
RIF1-210ENST00000484077 ATP10AO60312 1499 aa9.53□□□□□ -0.88
RIF1-210ENST00000484077 MBD5Q9P267 1494 aa9.53□□□□□ -0.88
RIF1-210ENST00000484077 SFSWAPQ12872 951 aaKnown RBP9.53□□□□□ -0.88
RIF1-210ENST00000484077 CCDC82Q8N4S0 544 aa9.53□□□□□ -0.88
RIF1-210ENST00000484077 AFAP1Q8N556 730 aa9.53□□□□□ -0.88
RIF1-210ENST00000484077 STK32AQ8WU08 396 aa9.53□□□□□ -0.88
RIF1-210ENST00000484077 CLP1Q92989 425 aaKnown RBP9.53□□□□□ -0.88
RIF1-210ENST00000484077 MIA2Q96PC5 1412 aa9.53□□□□□ -0.88
RIF1-210ENST00000484077 ARID4BQ4LE39 1312 aaPredicted RBP9.53□□□□□ -0.88
RIF1-210ENST00000484077 DNMT1P26358 1616 aaKnown RBP9.53□□□□□ -0.88
RIF1-210ENST00000484077 AGLP35573 1532 aa9.52□□□□□ -0.88
RIF1-210ENST00000484077 EPB42P16452 691 aa9.52□□□□□ -0.89
RIF1-210ENST00000484077 GSK3AP49840 483 aa9.52□□□□□ -0.89
RIF1-210ENST00000484077 RASSF7Q02833 373 aa9.52□□□□□ -0.89
RIF1-210ENST00000484077 SPEM2Q0P670 501 aa9.52□□□□□ -0.89
RIF1-210ENST00000484077 OCLNQ16625 522 aa9.52□□□□□ -0.89
RIF1-210ENST00000484077 C11orf91Q3C1V1 193 aa9.52□□□□□ -0.89
RIF1-210ENST00000484077 QTRT2Q9H974 415 aaKnown RBP9.52□□□□□ -0.89
RIF1-210ENST00000484077 KLF15Q9UIH9 416 aa9.52□□□□□ -0.89
RIF1-210ENST00000484077 MKL2Q9ULH7 1088 aa9.52□□□□□ -0.89
RIF1-210ENST00000484077 LGR5O75473 907 aa9.51□□□□□ -0.89
RIF1-210ENST00000484077 TMEM164Q5U3C3 297 aa9.51□□□□□ -0.89
RIF1-210ENST00000484077 ALYREFQ86V81 257 aaKnown RBP9.51□□□□□ -0.89
RIF1-210ENST00000484077 FCHSD1Q86WN1 690 aa9.51□□□□□ -0.89
RIF1-210ENST00000484077 TMEM151AQ8N4L1 468 aa9.51□□□□□ -0.89
RIF1-210ENST00000484077 TNFRSF25Q93038 417 aa9.51□□□□□ -0.89
RIF1-210ENST00000484077 BTBD6Q96KE9 485 aa9.51□□□□□ -0.89
RIF1-210ENST00000484077 DMGDHQ9UI17 866 aaKnown RBP9.51□□□□□ -0.89
RIF1-210ENST00000484077 ADARB2-AS1A8MUL3 147 aa9.5□□□□□ -0.89
RIF1-210ENST00000484077 PTCD1O75127 700 aaKnown RBP9.5□□□□□ -0.89
RIF1-210ENST00000484077 FKBP5Q13451 457 aaPredicted RBP9.5□□□□□ -0.89
RIF1-210ENST00000484077 SYT9Q86SS6 491 aa9.5□□□□□ -0.89
RIF1-210ENST00000484077 CXXC1Q9P0U4 656 aaPredicted RBP9.5□□□□□ -0.89
RIF1-210ENST00000484077 MROH2AA6NES4 1674 aa9.5□□□□□ -0.89
RIF1-210ENST00000484077 FGD6Q6ZV73 1430 aa9.49□□□□□ -0.89
RIF1-210ENST00000484077 PTPRMP28827 1452 aa9.49□□□□□ -0.89
RIF1-210ENST00000484077 TCOF1Q13428 1488 aaKnown RBP9.49□□□□□ -0.89
RIF1-210ENST00000484077 SHANK2Q9UPX8 1470 aa9.49□□□□□ -0.89
RIF1-210ENST00000484077 ELOA3CA0A087WX78 387 aaPredicted RBP9.49□□□□□ -0.89
RIF1-210ENST00000484077 ELOA3DA6NLF2 546 aaPredicted RBP9.49□□□□□ -0.89
RIF1-210ENST00000484077 PRMT3O60678 531 aa9.49□□□□□ -0.89
RIF1-210ENST00000484077 GDF11O95390 407 aa9.49□□□□□ -0.89
RIF1-210ENST00000484077 ALAS2P22557 587 aa9.49□□□□□ -0.89
RIF1-210ENST00000484077 AMPD1P23109 780 aa9.49□□□□□ -0.89
RIF1-210ENST00000484077 IRS1P35568 1242 aa9.49□□□□□ -0.89
RIF1-210ENST00000484077 PCBP4P57723 403 aaKnown RBP9.49□□□□□ -0.89
RIF1-210ENST00000484077 MLECQ14165 292 aa9.49□□□□□ -0.89
RIF1-210ENST00000484077 ELOA3BQ3SY89 546 aa9.49□□□□□ -0.89
RIF1-210ENST00000484077 ELOA3Q8NG57 546 aa9.49□□□□□ -0.89
RIF1-210ENST00000484077 MDFIQ99750 246 aa9.49□□□□□ -0.89
RIF1-210ENST00000484077 BCS1LQ9Y276 419 aa9.49□□□□□ -0.89
RIF1-210ENST00000484077 EIF2AK4Q9P2K8 1649 aaKnown RBP9.49□□□□□ -0.89
RIF1-210ENST00000484077 A2MP01023 1474 aa9.48□□□□□ -0.89
RIF1-210ENST00000484077 HNRNPMP52272 730 aaKnown RBP eCLIP9.48□□□□□ -0.89
RIF1-210ENST00000484077 DGKZQ13574 1117 aa9.48□□□□□ -0.89
RIF1-210ENST00000484077 CHSY3Q70JA7 882 aa9.48□□□□□ -0.89
RIF1-210ENST00000484077 PRIMPOLQ96LW4 560 aa9.48□□□□□ -0.89
RIF1-210ENST00000484077 SLC30A3Q99726 388 aa9.48□□□□□ -0.89
RIF1-210ENST00000484077 SPAG9O60271 1321 aaKnown RBP9.48□□□□□ -0.89
RIF1-210ENST00000484077 CNTNAP5Q8WYK1 1306 aa9.48□□□□□ -0.89
RIF1-210ENST00000484077 ZNF644Q9H582 1327 aaPredicted RBP9.48□□□□□ -0.89
RIF1-210ENST00000484077 C3P01024 1663 aa9.48□□□□□ -0.89
RIF1-210ENST00000484077 CLTCQ00610 1675 aaKnown RBP9.48□□□□□ -0.89
RIF1-210ENST00000484077 RTEL1-TNFRSF6BF6WH68 1400 aa9.48□□□□□ -0.89
RIF1-210ENST00000484077 RNF17Q9BXT8 1623 aaKnown RBP9.47□□□□□ -0.89
RIF1-210ENST00000484077 ARSDP51689 593 aa9.47□□□□□ -0.89
RIF1-210ENST00000484077 C1orf115Q9H7X2 142 aa9.47□□□□□ -0.89
RIF1-210ENST00000484077 RRAGCQ9HB90 399 aa9.47□□□□□ -0.89
RIF1-210ENST00000484077 ZC3H13Q5T200 1668 aaKnown RBP9.46□□□□□ -0.89
RIF1-210ENST00000484077 PREX1Q8TCU6 1659 aa9.46□□□□□ -0.89
RIF1-210ENST00000484077 HOXB4P17483 251 aaPredicted RBP9.46□□□□□ -0.9
RIF1-210ENST00000484077 INPP5BP32019 993 aa9.46□□□□□ -0.9
RIF1-210ENST00000484077 IDH3AP50213 366 aa9.46□□□□□ -0.9
RIF1-210ENST00000484077 KLK14Q9P0G3 267 aa9.46□□□□□ -0.9
RIF1-210ENST00000484077 GNB5O14775 395 aa9.45□□□□□ -0.9
RIF1-210ENST00000484077 DGKGP49619 791 aa9.45□□□□□ -0.9
RIF1-210ENST00000484077 SNRPNP63162 240 aaKnown RBP9.45□□□□□ -0.9
RIF1-210ENST00000484077 C16orf46Q6P387 395 aa9.45□□□□□ -0.9
RIF1-210ENST00000484077 IFT43Q96FT9 208 aa9.45□□□□□ -0.9
RIF1-210ENST00000484077 DAPK1P53355 1430 aa9.45□□□□□ -0.9
RIF1-210ENST00000484077 FAM135AQ9P2D6 1515 aa9.45□□□□□ -0.9
RIF1-210ENST00000484077 MICAL2O94851 1124 aa9.44□□□□□ -0.9
RIF1-210ENST00000484077 BRD2P25440 801 aaKnown RBP9.44□□□□□ -0.9
RIF1-210ENST00000484077 CCINQ13939 588 aa9.44□□□□□ -0.9
RIF1-210ENST00000484077 COX20Q5RI15 118 aa9.44□□□□□ -0.9
RIF1-210ENST00000484077 LINC00114Q6XXX2 140 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms