RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-222	ENST00000483882	IRS4	O14654	1257 aa	Predicted RBP	18.93	■□□□□ 0.62
NR1H3-222	ENST00000483882	GRM1	Q13255	1194 aa		18.93	■□□□□ 0.62
NR1H3-222	ENST00000483882	TRIM28	Q13263	835 aa	Known RBP	18.93	■□□□□ 0.62
NR1H3-222	ENST00000483882	WBP1L	Q9NX94	342 aa		18.93	■□□□□ 0.62
NR1H3-222	ENST00000483882	PTPRC	P08575	1304 aa		18.93	■□□□□ 0.62
NR1H3-222	ENST00000483882	YDJC	A8MPS7	323 aa		18.92	■□□□□ 0.62
NR1H3-222	ENST00000483882	WASHC4	Q2M389	1173 aa		18.92	■□□□□ 0.62
NR1H3-222	ENST00000483882	PRDM10	Q9NQV6	1147 aa		18.92	■□□□□ 0.62
NR1H3-222	ENST00000483882	RCAN3	Q9UKA8	241 aa		18.92	■□□□□ 0.62
NR1H3-222	ENST00000483882	DUOX1	Q9NRD9	1551 aa		18.92	■□□□□ 0.62
NR1H3-222	ENST00000483882	CDHR2	Q9BYE9	1310 aa		18.92	■□□□□ 0.62
NR1H3-222	ENST00000483882	C6orf229	H3BNL8	230 aa		18.91	■□□□□ 0.62
NR1H3-222	ENST00000483882	RIMBP2	O15034	1052 aa		18.91	■□□□□ 0.62
NR1H3-222	ENST00000483882	GPSM2	P81274	684 aa		18.91	■□□□□ 0.62
NR1H3-222	ENST00000483882	CWF19L2	Q2TBE0	894 aa	Known RBP	18.91	■□□□□ 0.62
NR1H3-222	ENST00000483882	BEND3	Q5T5X7	828 aa		18.91	■□□□□ 0.62
NR1H3-222	ENST00000483882	CST9	Q5W186	159 aa		18.91	■□□□□ 0.62
NR1H3-222	ENST00000483882	PCNT	O95613	3336 aa		18.91	■□□□□ 0.62
NR1H3-222	ENST00000483882	CACNA1F	O60840	1977 aa		18.9	■□□□□ 0.62
NR1H3-222	ENST00000483882	ECE1	P42892	770 aa		18.9	■□□□□ 0.62
NR1H3-222	ENST00000483882	LBX1	P52954	281 aa		18.9	■□□□□ 0.62
NR1H3-222	ENST00000483882	MAP2K1	Q02750	393 aa	Predicted RBP	18.9	■□□□□ 0.62
NR1H3-222	ENST00000483882	CYP4F22	Q6NT55	531 aa		18.9	■□□□□ 0.62
NR1H3-222	ENST00000483882	CAPNS2	Q96L46	248 aa		18.9	■□□□□ 0.62
NR1H3-222	ENST00000483882	GLIS2	Q9BZE0	524 aa	Predicted RBP	18.9	■□□□□ 0.62
NR1H3-222	ENST00000483882	DBNDD1	Q9H9R9	158 aa		18.9	■□□□□ 0.62
NR1H3-222	ENST00000483882	CNOT7	Q9UIV1	285 aa	Known RBP	18.9	■□□□□ 0.62
NR1H3-222	ENST00000483882	LRRC37A	A6NMS7	1700 aa		18.9	■□□□□ 0.62
NR1H3-222	ENST00000483882	SHTN1	A0MZ66	631 aa		18.89	■□□□□ 0.61
NR1H3-222	ENST00000483882	NEURL1B	A8MQ27	555 aa		18.89	■□□□□ 0.61
NR1H3-222	ENST00000483882		H7C1D1	291 aa		18.89	■□□□□ 0.61
NR1H3-222	ENST00000483882	CELF2	O95319	508 aa	Known RBP	18.89	■□□□□ 0.61
NR1H3-222	ENST00000483882	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.89	■□□□□ 0.61
NR1H3-222	ENST00000483882	TRPM4	Q8TD43	1214 aa		18.89	■□□□□ 0.61
NR1H3-222	ENST00000483882	ARHGAP45	Q92619	1136 aa		18.89	■□□□□ 0.61
NR1H3-222	ENST00000483882	ZBTB12	Q9Y330	459 aa	Predicted RBP	18.89	■□□□□ 0.61
NR1H3-222	ENST00000483882	TLL2	Q9Y6L7	1015 aa		18.89	■□□□□ 0.61
NR1H3-222	ENST00000483882	KIF16B	Q96L93	1317 aa		18.89	■□□□□ 0.61
NR1H3-222	ENST00000483882	TRIM27	P14373	513 aa		18.88	■□□□□ 0.61
NR1H3-222	ENST00000483882	HIRA	P54198	1017 aa	Predicted RBP	18.88	■□□□□ 0.61
NR1H3-222	ENST00000483882	RPS8	P62241	208 aa	Known RBP	18.88	■□□□□ 0.61
NR1H3-222	ENST00000483882	MICALL2	Q8IY33	904 aa		18.88	■□□□□ 0.61
NR1H3-222	ENST00000483882	CCDC191	Q8NCU4	936 aa		18.88	■□□□□ 0.61
NR1H3-222	ENST00000483882	LINS1	Q8NG48	757 aa		18.88	■□□□□ 0.61
NR1H3-222	ENST00000483882	JARID2	Q92833	1246 aa	Predicted RBP	18.88	■□□□□ 0.61
NR1H3-222	ENST00000483882	FRAT1	Q92837	279 aa	Predicted RBP	18.88	■□□□□ 0.61
NR1H3-222	ENST00000483882	EYA3	Q99504	573 aa		18.88	■□□□□ 0.61
NR1H3-222	ENST00000483882	ZNF408	Q9H9D4	720 aa		18.88	■□□□□ 0.61
NR1H3-222	ENST00000483882	POLL	Q9UGP5	575 aa		18.88	■□□□□ 0.61
NR1H3-222	ENST00000483882	COL4A1	P02462	1669 aa		18.88	■□□□□ 0.61
NR1H3-222	ENST00000483882	PSMD14	O00487	310 aa		18.87	■□□□□ 0.61
NR1H3-222	ENST00000483882	HSPA8	P11142	646 aa	Known RBP	18.87	■□□□□ 0.61
NR1H3-222	ENST00000483882	HSP90B1	P14625	803 aa	Known RBP	18.87	■□□□□ 0.61
NR1H3-222	ENST00000483882	DOK7	Q18PE1	504 aa		18.87	■□□□□ 0.61
NR1H3-222	ENST00000483882	SLC4A10	Q6U841	1118 aa		18.87	■□□□□ 0.61
NR1H3-222	ENST00000483882	ZC3H15	Q8WU90	426 aa	Known RBP	18.87	■□□□□ 0.61
NR1H3-222	ENST00000483882	GPR101	Q96P66	508 aa	Predicted RBP	18.87	■□□□□ 0.61
NR1H3-222	ENST00000483882	SEC31B	Q9NQW1	1179 aa		18.87	■□□□□ 0.61
NR1H3-222	ENST00000483882	PGAP2	Q9UHJ9	254 aa		18.87	■□□□□ 0.61
NR1H3-222	ENST00000483882	TRPM7	Q96QT4	1865 aa		18.86	■□□□□ 0.61
NR1H3-222	ENST00000483882	ECE2	O60344	883 aa		18.86	■□□□□ 0.61
NR1H3-222	ENST00000483882	GCKR	Q14397	625 aa		18.86	■□□□□ 0.61
NR1H3-222	ENST00000483882	ATF7IP	Q6VMQ6	1270 aa		18.86	■□□□□ 0.61
NR1H3-222	ENST00000483882	TBC1D16	Q8TBP0	767 aa		18.86	■□□□□ 0.61
NR1H3-222	ENST00000483882	CCDC85A	Q96PX6	553 aa	Predicted RBP	18.86	■□□□□ 0.61
NR1H3-222	ENST00000483882	BEGAIN	Q9BUH8	593 aa		18.86	■□□□□ 0.61
NR1H3-222	ENST00000483882	API5	Q9BZZ5	524 aa	Known RBP	18.86	■□□□□ 0.61
NR1H3-222	ENST00000483882	CWC25	Q9NXE8	425 aa	Predicted RBP	18.86	■□□□□ 0.61
NR1H3-222	ENST00000483882	PCCA	P05165	728 aa	Predicted RBP	18.85	■□□□□ 0.61
NR1H3-222	ENST00000483882	CASP7	P55210	303 aa		18.85	■□□□□ 0.61
NR1H3-222	ENST00000483882	NEXN	Q0ZGT2	675 aa		18.85	■□□□□ 0.61
NR1H3-222	ENST00000483882	CCDC152	Q4G0S7	254 aa		18.85	■□□□□ 0.61
NR1H3-222	ENST00000483882	CDC37L1	Q7L3B6	337 aa		18.85	■□□□□ 0.61
NR1H3-222	ENST00000483882		G3V3G9	751 aa		18.84	■□□□□ 0.61
NR1H3-222	ENST00000483882		H7C1W4	665 aa		18.84	■□□□□ 0.61
NR1H3-222	ENST00000483882	PLIN1	O60240	522 aa		18.84	■□□□□ 0.61
NR1H3-222	ENST00000483882	RLBP1	P12271	317 aa		18.84	■□□□□ 0.61
NR1H3-222	ENST00000483882	DCAF8	Q5TAQ9	597 aa		18.84	■□□□□ 0.61
NR1H3-222	ENST00000483882	ZKSCAN2	Q63HK3	967 aa		18.84	■□□□□ 0.61
NR1H3-222	ENST00000483882	SAMD7	Q7Z3H4	446 aa		18.84	■□□□□ 0.61
NR1H3-222	ENST00000483882	DPF2	Q92785	391 aa		18.84	■□□□□ 0.61
NR1H3-222	ENST00000483882	ZC3H12C	Q9C0D7	883 aa	Known RBP	18.84	■□□□□ 0.61
NR1H3-222	ENST00000483882	KCNQ5	Q9NR82	932 aa		18.84	■□□□□ 0.61
NR1H3-222	ENST00000483882	ANKIB1	Q9P2G1	1089 aa		18.84	■□□□□ 0.61
NR1H3-222	ENST00000483882	IPO8	O15397	1037 aa	Known RBP	18.83	■□□□□ 0.6
NR1H3-222	ENST00000483882	PDE8A	O60658	829 aa		18.83	■□□□□ 0.6
NR1H3-222	ENST00000483882	AOC2	O75106	756 aa		18.83	■□□□□ 0.6
NR1H3-222	ENST00000483882	ALDH1L1	O75891	902 aa		18.83	■□□□□ 0.6
NR1H3-222	ENST00000483882	UFL1	O94874	794 aa		18.83	■□□□□ 0.6
NR1H3-222	ENST00000483882	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	18.83	■□□□□ 0.6
NR1H3-222	ENST00000483882	RBM26	Q5T8P6	1007 aa	Known RBP	18.83	■□□□□ 0.6
NR1H3-222	ENST00000483882	SAPCD2	Q86UD0	394 aa		18.83	■□□□□ 0.6
NR1H3-222	ENST00000483882	USP48	Q86UV5	1035 aa		18.83	■□□□□ 0.6
NR1H3-222	ENST00000483882	CLUAP1	Q96AJ1	413 aa		18.83	■□□□□ 0.6
NR1H3-222	ENST00000483882	SRCIN1	Q9C0H9	1055 aa		18.83	■□□□□ 0.6
NR1H3-222	ENST00000483882	RTL9	Q8NET4	1388 aa		18.82	■□□□□ 0.6
NR1H3-222	ENST00000483882	THSD7B	Q9C0I4	1608 aa		18.82	■□□□□ 0.6
NR1H3-222	ENST00000483882	RPS12	P25398	132 aa	Known RBP	18.82	■□□□□ 0.6
NR1H3-222	ENST00000483882	INTS3	Q68E01	1043 aa	Known RBP	18.82	■□□□□ 0.6
NR1H3-222	ENST00000483882	GGA1	Q9UJY5	639 aa		18.82	■□□□□ 0.6

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