RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 GPSM2P81274 684 aa22.18■■□□□ 1.14
CPNE1-224ENST00000483359 RASSF7Q02833 373 aa22.18■■□□□ 1.14
CPNE1-224ENST00000483359 POLA2Q14181 598 aa22.18■■□□□ 1.14
CPNE1-224ENST00000483359 SOGA3Q5TF21 947 aa22.18■■□□□ 1.14
CPNE1-224ENST00000483359 SSH3Q8TE77 659 aa22.18■■□□□ 1.14
CPNE1-224ENST00000483359 PCDHB15Q9Y5E8 787 aa22.18■■□□□ 1.14
CPNE1-224ENST00000483359 CHRNDQ07001 517 aa22.18■■□□□ 1.14
CPNE1-224ENST00000483359 RPAP2Q8IXW5 612 aaPredicted RBP22.18■■□□□ 1.14
CPNE1-224ENST00000483359 HELBQ8NG08 1087 aaPredicted RBP22.18■■□□□ 1.14
CPNE1-224ENST00000483359 SNED1Q8TER0 1413 aa22.17■■□□□ 1.14
CPNE1-224ENST00000483359 FER1L6Q2WGJ9 1857 aa22.17■■□□□ 1.14
CPNE1-224ENST00000483359 A0A1B0GUL6 1792 aa22.17■■□□□ 1.14
CPNE1-224ENST00000483359 DCAF8L1A6NGE4 600 aa22.17■■□□□ 1.14
CPNE1-224ENST00000483359 DPP8Q6V1X1 898 aaPredicted RBP22.17■■□□□ 1.14
CPNE1-224ENST00000483359 MPNDQ8N594 471 aa22.17■■□□□ 1.14
CPNE1-224ENST00000483359 COPRSQ9NQ92 184 aa22.17■■□□□ 1.14
CPNE1-224ENST00000483359 NFKBIEO00221 500 aa22.16■■□□□ 1.14
CPNE1-224ENST00000483359 TAF5LO75529 589 aa22.16■■□□□ 1.14
CPNE1-224ENST00000483359 CC2D2BQ6DHV5 1058 aa22.16■■□□□ 1.14
CPNE1-224ENST00000483359 DUOX1Q9NRD9 1551 aa22.16■■□□□ 1.14
CPNE1-224ENST00000483359 EYA2O00167 538 aa22.16■■□□□ 1.14
CPNE1-224ENST00000483359 GRIN3BO60391 1043 aa22.16■■□□□ 1.14
CPNE1-224ENST00000483359 RTKN2Q8IZC4 609 aa22.16■■□□□ 1.14
CPNE1-224ENST00000483359 TAOK3Q9H2K8 898 aa22.16■■□□□ 1.14
CPNE1-224ENST00000483359 LTBP1Q14766 1721 aa22.15■■□□□ 1.14
CPNE1-224ENST00000483359 GPR101Q96P66 508 aaPredicted RBP22.15■■□□□ 1.14
CPNE1-224ENST00000483359 RIPOR2Q9Y4F9 1068 aa22.15■■□□□ 1.14
CPNE1-224ENST00000483359 XDHP47989 1333 aa22.15■■□□□ 1.14
CPNE1-224ENST00000483359 WTIPA6NIX2 430 aaPredicted RBP22.14■■□□□ 1.14
CPNE1-224ENST00000483359 HMMRO75330 724 aa22.14■■□□□ 1.14
CPNE1-224ENST00000483359 SURF6O75683 361 aaKnown RBP22.14■■□□□ 1.14
CPNE1-224ENST00000483359 METTL24Q5JXM2 366 aa22.14■■□□□ 1.14
CPNE1-224ENST00000483359 SNAP23O00161 211 aa22.14■■□□□ 1.13
CPNE1-224ENST00000483359 UFL1O94874 794 aa22.14■■□□□ 1.13
CPNE1-224ENST00000483359 NEFLP07196 543 aa22.14■■□□□ 1.13
CPNE1-224ENST00000483359 ATG9AQ7Z3C6 839 aa22.14■■□□□ 1.13
CPNE1-224ENST00000483359 EXOC6BQ9Y2D4 811 aa22.14■■□□□ 1.13
CPNE1-224ENST00000483359 C6orf229H3BNL8 230 aa22.13■■□□□ 1.13
CPNE1-224ENST00000483359 FKBP4Q02790 459 aaKnown RBP eCLIP22.13■■□□□ 1.13
CPNE1-224ENST00000483359 OS9Q13438 667 aaPredicted RBP22.13■■□□□ 1.13
CPNE1-224ENST00000483359 ZNF277Q9NRM2 450 aaPredicted RBP22.13■■□□□ 1.13
CPNE1-224ENST00000483359 POLLQ9UGP5 575 aa22.12■■□□□ 1.13
CPNE1-224ENST00000483359 MROH5Q6ZUA9 1318 aa22.12■■□□□ 1.13
CPNE1-224ENST00000483359 TBC1D16Q8TBP0 767 aa22.12■■□□□ 1.13
CPNE1-224ENST00000483359 ANKRD2Q9GZV1 360 aa22.12■■□□□ 1.13
CPNE1-224ENST00000483359 GGA1Q9UJY5 639 aa22.12■■□□□ 1.13
CPNE1-224ENST00000483359 APBB1O00213 710 aa22.11■■□□□ 1.13
CPNE1-224ENST00000483359 CIAO1O76071 339 aa22.11■■□□□ 1.13
CPNE1-224ENST00000483359 KCNJ4P48050 445 aa22.11■■□□□ 1.13
CPNE1-224ENST00000483359 G3BP1Q13283 466 aaKnown RBP eCLIP22.11■■□□□ 1.132e-8■□□□□ 11.1
CPNE1-224ENST00000483359 PODXL2Q9NZ53 605 aa22.11■■□□□ 1.13
CPNE1-224ENST00000483359 IL15P40933 162 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-224ENST00000483359 PRELPP51888 382 aa22.1■■□□□ 1.13
CPNE1-224ENST00000483359 PSMD1Q99460 953 aa22.1■■□□□ 1.13
CPNE1-224ENST00000483359 AAMPQ13685 434 aa22.1■■□□□ 1.13
CPNE1-224ENST00000483359 GRIPAP1Q4V328 841 aa22.1■■□□□ 1.13
CPNE1-224ENST00000483359 FBXO3Q9UK99 471 aa22.1■■□□□ 1.13
CPNE1-224ENST00000483359 RIMBP2O15034 1052 aa22.09■■□□□ 1.13
CPNE1-224ENST00000483359 BCL11AQ9H165 835 aa22.09■■□□□ 1.13
CPNE1-224ENST00000483359 CCDC88AQ3V6T2 1871 aa22.09■■□□□ 1.13
CPNE1-224ENST00000483359 KLRK1P26718 216 aa22.08■■□□□ 1.13
CPNE1-224ENST00000483359 AOC3Q16853 763 aa22.08■■□□□ 1.13
CPNE1-224ENST00000483359 VGLL2Q8N8G2 317 aa22.08■■□□□ 1.13
CPNE1-224ENST00000483359 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.08■■□□□ 1.13
CPNE1-224ENST00000483359 ZNF804BA4D1E1 1349 aa22.08■■□□□ 1.13
CPNE1-224ENST00000483359 PDE8BO95263 885 aa22.08■■□□□ 1.12
CPNE1-224ENST00000483359 ATP2B4P23634 1241 aa22.08■■□□□ 1.12
CPNE1-224ENST00000483359 TFCP2Q12800 502 aa22.08■■□□□ 1.12
CPNE1-224ENST00000483359 RTFDC1Q9BY42 306 aaPredicted RBP22.08■■□□□ 1.12
CPNE1-224ENST00000483359 CEP126Q9P2H0 1117 aa22.08■■□□□ 1.12
CPNE1-224ENST00000483359 LTBP3Q9NS15 1303 aa22.08■■□□□ 1.12
CPNE1-224ENST00000483359 PPIP5K2O43314 1243 aa22.07■■□□□ 1.12
CPNE1-224ENST00000483359 SUPT20HQ8NEM7 779 aa22.07■■□□□ 1.12
CPNE1-224ENST00000483359 NOP58Q9Y2X3 529 aaKnown RBP22.07■■□□□ 1.12
CPNE1-224ENST00000483359 SBF1O95248 1867 aa22.07■■□□□ 1.12
CPNE1-224ENST00000483359 SASH1O94885 1247 aa22.07■■□□□ 1.12
CPNE1-224ENST00000483359 IARSP41252 1262 aaKnown RBP22.07■■□□□ 1.12
CPNE1-224ENST00000483359 WASHC4Q2M389 1173 aa22.07■■□□□ 1.12
CPNE1-224ENST00000483359 LEMD3Q9Y2U8 911 aa22.07■■□□□ 1.12
CPNE1-224ENST00000483359 RNF181Q9P0P0 153 aa22.06■■□□□ 1.12
CPNE1-224ENST00000483359 COL4A5P29400 1685 aa22.05■■□□□ 1.12
CPNE1-224ENST00000483359 LMNB1P20700 586 aa22.05■■□□□ 1.12
CPNE1-224ENST00000483359 LARGE2Q8N3Y3 721 aa22.05■■□□□ 1.12
CPNE1-224ENST00000483359 PUM3Q15397 648 aaKnown RBP22.05■■□□□ 1.12
CPNE1-224ENST00000483359 C9orf131Q5VYM1 1079 aa22.05■■□□□ 1.12
CPNE1-224ENST00000483359 TXNRD3Q86VQ6 643 aa22.05■■□□□ 1.12
CPNE1-224ENST00000483359 EYA3Q99504 573 aa22.05■■□□□ 1.12
CPNE1-224ENST00000483359 ZC3H12CQ9C0D7 883 aaKnown RBP22.04■■□□□ 1.12
CPNE1-224ENST00000483359 KIAA2012Q0VF49 1180 aa22.03■■□□□ 1.12
CPNE1-224ENST00000483359 ATP2B3Q16720 1220 aa22.03■■□□□ 1.12
CPNE1-224ENST00000483359 TIAM2Q8IVF5 1701 aa22.03■■□□□ 1.12
CPNE1-224ENST00000483359 MED23Q9ULK4 1368 aa22.03■■□□□ 1.12
CPNE1-224ENST00000483359 UBE4AQ14139 1066 aa22.03■■□□□ 1.12
CPNE1-224ENST00000483359 DOK7Q18PE1 504 aa22.03■■□□□ 1.12
CPNE1-224ENST00000483359 HSP90AB4PQ58FF6 505 aa22.03■■□□□ 1.12
CPNE1-224ENST00000483359 DBNDD1Q9H9R9 158 aa22.03■■□□□ 1.12
CPNE1-224ENST00000483359 IL1RAPL2Q9NP60 686 aa22.03■■□□□ 1.12
CPNE1-224ENST00000483359 IGHDP01880 384 aa22.02■■□□□ 1.12
CPNE1-224ENST00000483359 HDAC1Q13547 482 aaPredicted RBP22.02■■□□□ 1.12
CPNE1-224ENST00000483359 ERC1Q8IUD2 1116 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms