RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 MYH3P11055 1940 aa18.05■□□□□ 0.48
VARS-226ENST00000483275 ASTN2O75129 1339 aaPredicted RBP18.04■□□□□ 0.48
VARS-226ENST00000483275 ZNF853P0CG23 659 aa18.04■□□□□ 0.48
VARS-226ENST00000483275 TBC1D16Q8TBP0 767 aa18.04■□□□□ 0.48
VARS-226ENST00000483275 UFL1O94874 794 aa18.03■□□□□ 0.48
VARS-226ENST00000483275 RPS8P62241 208 aaKnown RBP18.03■□□□□ 0.48
VARS-226ENST00000483275 CDC37L1Q7L3B6 337 aa18.03■□□□□ 0.48
VARS-226ENST00000483275 C8orf58Q8NAV2 365 aa18.03■□□□□ 0.48
VARS-226ENST00000483275 ZC3H15Q8WU90 426 aaKnown RBP18.03■□□□□ 0.48
VARS-226ENST00000483275 PRKRIP1Q9H875 184 aaPredicted RBP18.03■□□□□ 0.48
VARS-226ENST00000483275 HUNKP57058 714 aa18.02■□□□□ 0.48
VARS-226ENST00000483275 KRT26Q7Z3Y9 468 aa18.02■□□□□ 0.48
VARS-226ENST00000483275 ZBTB38Q8NAP3 1195 aaPredicted RBP18.02■□□□□ 0.48
VARS-226ENST00000483275 ZNF646O15015 1829 aaPredicted RBP18.01■□□□□ 0.47
VARS-226ENST00000483275 MAP2K2P36507 400 aa18.01■□□□□ 0.47
VARS-226ENST00000483275 TRIM28Q13263 835 aaKnown RBP18.01■□□□□ 0.47
VARS-226ENST00000483275 IFT57Q9NWB7 429 aa18.01■□□□□ 0.47
VARS-226ENST00000483275 ANKIB1Q9P2G1 1089 aa18.01■□□□□ 0.47
VARS-226ENST00000483275 CCDC85CA6NKD9 419 aa18■□□□□ 0.47
VARS-226ENST00000483275 KIF4BQ2VIQ3 1234 aa18■□□□□ 0.47
VARS-226ENST00000483275 FAM161AQ3B820 660 aa18■□□□□ 0.47
VARS-226ENST00000483275 DPF2Q92785 391 aa18■□□□□ 0.47
VARS-226ENST00000483275 EYA3Q99504 573 aa18■□□□□ 0.47
VARS-226ENST00000483275 GGA3Q9NZ52 723 aa18■□□□□ 0.47
VARS-226ENST00000483275 WTIPA6NIX2 430 aaPredicted RBP17.99■□□□□ 0.47
VARS-226ENST00000483275 BRPF1P55201 1214 aaPredicted RBP17.99■□□□□ 0.47
VARS-226ENST00000483275 TSPYL6Q8N831 410 aa17.99■□□□□ 0.47
VARS-226ENST00000483275 GNAI1P63096 354 aa17.98■□□□□ 0.47
VARS-226ENST00000483275 TSR2Q969E8 191 aaKnown RBP17.98■□□□□ 0.47
VARS-226ENST00000483275 HHIPL1Q96JK4 782 aa17.98■□□□□ 0.47
VARS-226ENST00000483275 ZC3H12CQ9C0D7 883 aaKnown RBP17.98■□□□□ 0.47
VARS-226ENST00000483275 CWC25Q9NXE8 425 aaPredicted RBP17.98■□□□□ 0.47
VARS-226ENST00000483275 GGA1Q9UJY5 639 aa17.98■□□□□ 0.47
VARS-226ENST00000483275 SCAF8Q9UPN6 1271 aaKnown RBP17.98■□□□□ 0.47
VARS-226ENST00000483275 G3V3G9 751 aa17.97■□□□□ 0.47
VARS-226ENST00000483275 PCCAP05165 728 aaPredicted RBP17.97■□□□□ 0.47
VARS-226ENST00000483275 RPS12P25398 132 aaKnown RBP17.97■□□□□ 0.47
VARS-226ENST00000483275 CCDC152Q4G0S7 254 aa17.97■□□□□ 0.47
VARS-226ENST00000483275 DCAF8Q5TAQ9 597 aa17.97■□□□□ 0.47
VARS-226ENST00000483275 DCPSQ96C86 337 aaKnown RBP17.97■□□□□ 0.47
VARS-226ENST00000483275 GBA2Q9HCG7 927 aaPredicted RBP17.97■□□□□ 0.47
VARS-226ENST00000483275 MAP3K2Q9Y2U5 619 aa17.97■□□□□ 0.47
VARS-226ENST00000483275 AKAP11Q9UKA4 1901 aa17.97■□□□□ 0.47
VARS-226ENST00000483275 PDE8AO60658 829 aa17.96■□□□□ 0.47
VARS-226ENST00000483275 CCDC191Q8NCU4 936 aa17.96■□□□□ 0.47
VARS-226ENST00000483275 METTL22Q9BUU2 404 aaPredicted RBP17.96■□□□□ 0.47
VARS-226ENST00000483275 PODXL2Q9NZ53 605 aa17.96■□□□□ 0.47
VARS-226ENST00000483275 TNRC18O15417 2968 aaPredicted RBP17.95■□□□□ 0.46
VARS-226ENST00000483275 FAM155AB1AL88 458 aaPredicted RBP17.95■□□□□ 0.46
VARS-226ENST00000483275 VIL1P09327 827 aaKnown RBP17.95■□□□□ 0.46
VARS-226ENST00000483275 NOGQ13253 232 aa17.95■□□□□ 0.46
VARS-226ENST00000483275 CCDC184Q52MB2 194 aa17.95■□□□□ 0.46
VARS-226ENST00000483275 MCOLN1Q9GZU1 580 aa17.95■□□□□ 0.46
VARS-226ENST00000483275 IGKV5-2P06315 115 aa17.94■□□□□ 0.46
VARS-226ENST00000483275 CALD1Q05682 793 aaKnown RBP17.94■□□□□ 0.46
VARS-226ENST00000483275 ANGEL2Q5VTE6 544 aaKnown RBP17.94■□□□□ 0.46
VARS-226ENST00000483275 RGMBQ6NW40 437 aa17.94■□□□□ 0.46
VARS-226ENST00000483275 ANKRD18AQ8IVF6 992 aa17.94■□□□□ 0.46
VARS-226ENST00000483275 CDCA5Q96FF9 252 aa17.94■□□□□ 0.46
VARS-226ENST00000483275 MXD3Q9BW11 206 aa17.94■□□□□ 0.46
VARS-226ENST00000483275 XDHP47989 1333 aa17.94■□□□□ 0.46
VARS-226ENST00000483275 PI4KAP2A4QPH2 592 aa17.93■□□□□ 0.46
VARS-226ENST00000483275 CA12O43570 354 aa17.93■□□□□ 0.46
VARS-226ENST00000483275 DDX58O95786 925 aaKnown RBP17.93■□□□□ 0.46
VARS-226ENST00000483275 CTSWP56202 376 aa17.93■□□□□ 0.46
VARS-226ENST00000483275 CWF19L2Q2TBE0 894 aaKnown RBP17.93■□□□□ 0.46
VARS-226ENST00000483275 CCDC30Q5VVM6 783 aa17.93■□□□□ 0.46
VARS-226ENST00000483275 RSBN1LQ6PCB5 846 aaPredicted RBP17.93■□□□□ 0.46
VARS-226ENST00000483275 SULF1Q8IWU6 871 aa17.93■□□□□ 0.46
VARS-226ENST00000483275 PI4KAP1Q8N8J0 262 aa17.93■□□□□ 0.46
VARS-226ENST00000483275 C2orf69Q8N8R5 385 aa17.93■□□□□ 0.46
VARS-226ENST00000483275 ZNF157P51786 506 aaPredicted RBP17.92■□□□□ 0.46
VARS-226ENST00000483275 DGKZQ13574 1117 aa17.92■□□□□ 0.46
VARS-226ENST00000483275 SCARF1Q14162 830 aa17.92■□□□□ 0.46
VARS-226ENST00000483275 G2E3Q7L622 706 aa17.92■□□□□ 0.46
VARS-226ENST00000483275 GREM2Q9H772 168 aa17.92■□□□□ 0.46
VARS-226ENST00000483275 A0A1B0GUL6 1792 aa17.91■□□□□ 0.46
VARS-226ENST00000483275 PAPPA2Q9BXP8 1791 aa17.91■□□□□ 0.46
VARS-226ENST00000483275 ZNF280AP59817 542 aaPredicted RBP17.91■□□□□ 0.46
VARS-226ENST00000483275 KIF23Q02241 960 aaPredicted RBP17.91■□□□□ 0.46
VARS-226ENST00000483275 MOB2Q70IA6 237 aa17.91■□□□□ 0.46
VARS-226ENST00000483275 FBXW7Q969H0 707 aa17.91■□□□□ 0.46
VARS-226ENST00000483275 ZNF609O15014 1411 aa17.9■□□□□ 0.46
VARS-226ENST00000483275 HSP90B1P14625 803 aaKnown RBP17.9■□□□□ 0.46
VARS-226ENST00000483275 PRAMEF18Q5VWM3 479 aa17.9■□□□□ 0.46
VARS-226ENST00000483275 KSR2Q6VAB6 950 aa17.9■□□□□ 0.46
VARS-226ENST00000483275 UBE3BQ7Z3V4 1068 aa17.9■□□□□ 0.46
VARS-226ENST00000483275 GMLQ99445 158 aa17.9■□□□□ 0.46
VARS-226ENST00000483275 SLC10A3P09131 477 aa17.89■□□□□ 0.45
VARS-226ENST00000483275 KLRK1P26718 216 aa17.89■□□□□ 0.45
VARS-226ENST00000483275 TTLL11Q8NHH1 800 aa17.89■□□□□ 0.45
VARS-226ENST00000483275 MYOZ2Q9NPC6 264 aa17.89■□□□□ 0.45
VARS-226ENST00000483275 MINPP1Q9UNW1 487 aa17.89■□□□□ 0.45
VARS-226ENST00000483275 USP17L3A6NCW0 530 aa17.88■□□□□ 0.45
VARS-226ENST00000483275 USP17L4A6NCW7 530 aa17.88■□□□□ 0.45
VARS-226ENST00000483275 NEURL1BA8MQ27 555 aa17.88■□□□□ 0.45
VARS-226ENST00000483275 TRPA1O75762 1119 aa17.88■□□□□ 0.45
VARS-226ENST00000483275 USP17L8P0C7I0 530 aa17.88■□□□□ 0.45
VARS-226ENST00000483275 ATP2B4P23634 1241 aa17.88■□□□□ 0.45
VARS-226ENST00000483275 USP17L1Q7RTZ2 530 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms