RNA–Protein interactions for RNA: ENST00000483148.5

APTX-226, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,764 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-226ENST00000483148 GNAI1P63096 354 aa12.18□□□□□ -0.46
APTX-226ENST00000483148 PRPF40BQ6NWY9 871 aaKnown RBP12.18□□□□□ -0.46
APTX-226ENST00000483148 ATF7IPQ6VMQ6 1270 aa12.18□□□□□ -0.46
APTX-226ENST00000483148 FAM184AQ8NB25 1140 aa12.18□□□□□ -0.46
APTX-226ENST00000483148 CNKSR1Q969H4 720 aa12.18□□□□□ -0.46
APTX-226ENST00000483148 DIAPH3Q9NSV4 1193 aa12.18□□□□□ -0.46
APTX-226ENST00000483148 ZBTB40Q9NUA8 1239 aa12.18□□□□□ -0.46
APTX-226ENST00000483148 SPTLC3Q9NUV7 552 aa12.18□□□□□ -0.46
APTX-226ENST00000483148 MIS18AQ9NYP9 233 aa12.18□□□□□ -0.46
APTX-226ENST00000483148 NAP1L2Q9ULW6 460 aaPredicted RBP12.18□□□□□ -0.46
APTX-226ENST00000483148 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
APTX-226ENST00000483148 IPO8O15397 1037 aaKnown RBP12.17□□□□□ -0.46
APTX-226ENST00000483148 KCNQ3O43525 872 aa12.17□□□□□ -0.46
APTX-226ENST00000483148 PDIA4P13667 645 aaKnown RBP12.17□□□□□ -0.46
APTX-226ENST00000483148 GABPB1Q06547 395 aaPredicted RBP12.17□□□□□ -0.46
APTX-226ENST00000483148 NOLC1Q14978 699 aaKnown RBP eCLIP12.17□□□□□ -0.46
APTX-226ENST00000483148 EAPPQ56P03 285 aaPredicted RBP12.17□□□□□ -0.46
APTX-226ENST00000483148 STYK1Q6J9G0 422 aa12.17□□□□□ -0.46
APTX-226ENST00000483148 PDCL2Q8N4E4 241 aa12.17□□□□□ -0.46
APTX-226ENST00000483148 ARID3AQ99856 593 aa12.17□□□□□ -0.46
APTX-226ENST00000483148 TSPY26PQ9H489 355 aa12.17□□□□□ -0.46
APTX-226ENST00000483148 TMEM51Q9NW97 253 aa12.17□□□□□ -0.46
APTX-226ENST00000483148 TSPYL4Q9UJ04 414 aa12.17□□□□□ -0.46
APTX-226ENST00000483148 ZNF541Q9H0D2 1346 aa12.17□□□□□ -0.46
APTX-226ENST00000483148 IQCA1LA6NCM1 817 aa12.16□□□□□ -0.46
APTX-226ENST00000483148 CDC45O75419 566 aa12.16□□□□□ -0.46
APTX-226ENST00000483148 STARD3NLO95772 234 aa12.16□□□□□ -0.46
APTX-226ENST00000483148 OLFM4Q6UX06 510 aa12.16□□□□□ -0.46
APTX-226ENST00000483148 ITPRIPQ8IWB1 547 aa12.16□□□□□ -0.46
APTX-226ENST00000483148 GPT2Q8TD30 523 aa12.16□□□□□ -0.46
APTX-226ENST00000483148 ZNF496Q96IT1 587 aaPredicted RBP12.16□□□□□ -0.46
APTX-226ENST00000483148 BCL2L13Q9BXK5 485 aa12.16□□□□□ -0.46
APTX-226ENST00000483148 MBIPQ9NS73 344 aa12.16□□□□□ -0.46
APTX-226ENST00000483148 CLEC11AQ9Y240 323 aa12.16□□□□□ -0.46
APTX-226ENST00000483148 HEG1Q9ULI3 1381 aa12.16□□□□□ -0.46
APTX-226ENST00000483148 PRPF40AO75400 957 aaKnown RBP12.15□□□□□ -0.46
APTX-226ENST00000483148 A1BGP04217 495 aa12.15□□□□□ -0.46
APTX-226ENST00000483148 TPM3P06753 285 aa12.15□□□□□ -0.46
APTX-226ENST00000483148 FKBP5Q13451 457 aaPredicted RBP12.15□□□□□ -0.46
APTX-226ENST00000483148 ATP2B3Q16720 1220 aa12.15□□□□□ -0.46
APTX-226ENST00000483148 DEFB115Q30KQ5 88 aa12.15□□□□□ -0.46
APTX-226ENST00000483148 TBC1D9Q6ZT07 1266 aa12.15□□□□□ -0.46
APTX-226ENST00000483148 TTC5Q8N0Z6 440 aa12.15□□□□□ -0.46
APTX-226ENST00000483148 MASTLQ96GX5 879 aa12.15□□□□□ -0.46
APTX-226ENST00000483148 ZNF330Q9Y3S2 320 aaPredicted RBP12.15□□□□□ -0.46
APTX-226ENST00000483148 RASSF10A6NK89 507 aa12.15□□□□□ -0.46
APTX-226ENST00000483148 CAMTA2O94983 1202 aa12.15□□□□□ -0.46
APTX-226ENST00000483148 TRIM27P14373 513 aa12.15□□□□□ -0.46
APTX-226ENST00000483148 EIF4A1P60842 406 aaKnown RBP12.15□□□□□ -0.46
APTX-226ENST00000483148 SYCP1Q15431 976 aa12.15□□□□□ -0.46
APTX-226ENST00000483148 MAP1SQ66K74 1059 aaPredicted RBP12.15□□□□□ -0.46
APTX-226ENST00000483148 CNTROBQ8N137 903 aa12.15□□□□□ -0.46
APTX-226ENST00000483148 ANKRD7Q92527 254 aa12.15□□□□□ -0.46
APTX-226ENST00000483148 SETDB2Q96T68 719 aa12.15□□□□□ -0.46
APTX-226ENST00000483148 ZNF277Q9NRM2 450 aaPredicted RBP12.15□□□□□ -0.46
APTX-226ENST00000483148 SMC4Q9NTJ3 1288 aa12.15□□□□□ -0.46
APTX-226ENST00000483148 EPHX2P34913 555 aa12.14□□□□□ -0.47
APTX-226ENST00000483148 FMR1Q06787 632 aaKnown RBP eCLIP12.14□□□□□ -0.47
APTX-226ENST00000483148 CHAF1AQ13111 956 aaPredicted RBP12.14□□□□□ -0.47
APTX-226ENST00000483148 MAPK8IP2Q13387 824 aaPredicted RBP12.14□□□□□ -0.47
APTX-226ENST00000483148 CNBD1Q8NA66 436 aa12.14□□□□□ -0.47
APTX-226ENST00000483148 OGFRQ9NZT2 677 aa12.14□□□□□ -0.47
APTX-226ENST00000483148 TMEM63CQ9P1W3 806 aa12.14□□□□□ -0.47
APTX-226ENST00000483148 WDR33Q9C0J8 1336 aaKnown RBP12.14□□□□□ -0.47
APTX-226ENST00000483148 SCN4AP35499 1836 aa12.13□□□□□ -0.47
APTX-226ENST00000483148 SYCE3A1L190 88 aa12.13□□□□□ -0.47
APTX-226ENST00000483148 TSR2Q969E8 191 aaKnown RBP12.13□□□□□ -0.47
APTX-226ENST00000483148 FMNL2Q96PY5 1086 aa12.13□□□□□ -0.47
APTX-226ENST00000483148 LNPKQ9C0E8 428 aa12.13□□□□□ -0.47
APTX-226ENST00000483148 HACL1Q9UJ83 578 aa12.13□□□□□ -0.47
APTX-226ENST00000483148 CACNA1SQ13698 1873 aa12.13□□□□□ -0.47
APTX-226ENST00000483148 IL6STP40189 918 aaPredicted RBP12.13□□□□□ -0.47
APTX-226ENST00000483148 FAM193AP78312 1265 aa12.13□□□□□ -0.47
APTX-226ENST00000483148 SLC20A2Q08357 652 aa12.13□□□□□ -0.47
APTX-226ENST00000483148 SOGA3Q5TF21 947 aa12.13□□□□□ -0.47
APTX-226ENST00000483148 RBM27Q9P2N5 1060 aaKnown RBP12.13□□□□□ -0.47
APTX-226ENST00000483148 CCDC85CA6NKD9 419 aa12.12□□□□□ -0.47
APTX-226ENST00000483148 ST18O60284 1047 aa12.12□□□□□ -0.47
APTX-226ENST00000483148 FKBP4Q02790 459 aaKnown RBP eCLIP12.12□□□□□ -0.47
APTX-226ENST00000483148 CCDC93Q567U6 631 aa12.12□□□□□ -0.47
APTX-226ENST00000483148 ADAMTSL1Q8N6G6 1762 aa12.12□□□□□ -0.47
APTX-226ENST00000483148 CCDC66A2RUB6 948 aa12.11□□□□□ -0.47
APTX-226ENST00000483148 NPHP1O15259 732 aa12.11□□□□□ -0.47
APTX-226ENST00000483148 CTIFO43310 598 aaKnown RBP12.11□□□□□ -0.47
APTX-226ENST00000483148 PIP4K2AP48426 406 aaPredicted RBP12.11□□□□□ -0.47
APTX-226ENST00000483148 RGS19P49795 217 aa12.11□□□□□ -0.47
APTX-226ENST00000483148 ST5P78524 1137 aa12.11□□□□□ -0.47
APTX-226ENST00000483148 ALDH1L2Q3SY69 923 aa12.11□□□□□ -0.47
APTX-226ENST00000483148 TAF7LQ5H9L4 462 aa12.11□□□□□ -0.47
APTX-226ENST00000483148 FZD9O00144 591 aa12.1□□□□□ -0.47
APTX-226ENST00000483148 SNRPA1P09661 255 aaKnown RBP12.1□□□□□ -0.47
APTX-226ENST00000483148 MAP2K1Q02750 393 aaPredicted RBP12.1□□□□□ -0.47
APTX-226ENST00000483148 KRT24Q2M2I5 525 aa12.1□□□□□ -0.47
APTX-226ENST00000483148 SYNE4Q8N205 404 aa12.1□□□□□ -0.47
APTX-226ENST00000483148 TMEM57Q8N5G2 664 aa12.1□□□□□ -0.47
APTX-226ENST00000483148 TEX13AQ9BXU3 409 aaPredicted RBP12.1□□□□□ -0.47
APTX-226ENST00000483148 ABT1Q9ULW3 272 aaKnown RBP12.1□□□□□ -0.47
APTX-226ENST00000483148 SCN7AQ01118 1682 aa12.1□□□□□ -0.47
APTX-226ENST00000483148 LAMB4A4D0S4 1761 aa12.1□□□□□ -0.47
APTX-226ENST00000483148 PRAMEF22A3QJZ6 481 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms