RNA–Protein interactions for RNA: ENST00000482961.1

GTDC1-216, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 1 (best)

Gene GTDC1, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-216ENST00000482961 TRIM33Q9UPN9 1127 aa5.74□□□□□ -1.49
GTDC1-216ENST00000482961 LEMD3Q9Y2U8 911 aa5.74□□□□□ -1.49
GTDC1-216ENST00000482961 USP17L5A8MUK1 530 aa5.73□□□□□ -1.49
GTDC1-216ENST00000482961 DUOXA2Q1HG44 320 aa5.73□□□□□ -1.49
GTDC1-216ENST00000482961 LCE5AQ5TCM9 118 aa5.73□□□□□ -1.49
GTDC1-216ENST00000482961 STAG2Q8N3U4 1231 aa5.73□□□□□ -1.49
GTDC1-216ENST00000482961 GIMAP7Q8NHV1 300 aa5.73□□□□□ -1.49
GTDC1-216ENST00000482961 SCG3Q8WXD2 468 aaKnown RBP5.73□□□□□ -1.49
GTDC1-216ENST00000482961 ATG3Q9NT62 314 aa5.73□□□□□ -1.49
GTDC1-216ENST00000482961 KCNK4Q9NYG8 393 aa5.73□□□□□ -1.49
GTDC1-216ENST00000482961 M0R2N6 131 aa5.72□□□□□ -1.49
GTDC1-216ENST00000482961 PSAPP07602 524 aa5.72□□□□□ -1.49
GTDC1-216ENST00000482961 ARSDP51689 593 aa5.72□□□□□ -1.49
GTDC1-216ENST00000482961 CLDN10P78369 228 aa5.72□□□□□ -1.49
GTDC1-216ENST00000482961 KIAA1211Q6ZU35 1233 aa5.72□□□□□ -1.49
GTDC1-216ENST00000482961 FBXL6Q8N531 539 aa5.72□□□□□ -1.49
GTDC1-216ENST00000482961 NFATC2IPQ8NCF5 419 aa5.72□□□□□ -1.49
GTDC1-216ENST00000482961 RASA1P20936 1047 aa5.71□□□□□ -1.5
GTDC1-216ENST00000482961 CDC25BP30305 580 aa5.71□□□□□ -1.5
GTDC1-216ENST00000482961 COL19A1Q14993 1142 aa5.71□□□□□ -1.5
GTDC1-216ENST00000482961 PKN1Q16512 942 aa5.71□□□□□ -1.5
GTDC1-216ENST00000482961 MSMPQ1L6U9 139 aa5.71□□□□□ -1.5
GTDC1-216ENST00000482961 VSIG10LQ86VR7 867 aa5.71□□□□□ -1.5
GTDC1-216ENST00000482961 CACTIN-AS1Q8N1I8 211 aa5.71□□□□□ -1.5
GTDC1-216ENST00000482961 C11orf16Q9NQ32 467 aa5.71□□□□□ -1.5
GTDC1-216ENST00000482961 KLK14Q9P0G3 267 aa5.71□□□□□ -1.5
GTDC1-216ENST00000482961 RBM19Q9Y4C8 960 aaKnown RBP5.71□□□□□ -1.5
GTDC1-216ENST00000482961 ZNF865P0CJ78 1059 aaPredicted RBP5.7□□□□□ -1.5
GTDC1-216ENST00000482961 FOSL1P15407 271 aa5.7□□□□□ -1.5
GTDC1-216ENST00000482961 NEUROD2Q15784 382 aa5.7□□□□□ -1.5
GTDC1-216ENST00000482961 NFXL1Q6ZNB6 911 aa5.7□□□□□ -1.5
GTDC1-216ENST00000482961 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.7□□□□□ -1.5
GTDC1-216ENST00000482961 COL26A1Q96A83 441 aa5.7□□□□□ -1.5
GTDC1-216ENST00000482961 CARD10Q9BWT7 1032 aa5.7□□□□□ -1.5
GTDC1-216ENST00000482961 OSBPL1AQ9BXW6 950 aa5.7□□□□□ -1.5
GTDC1-216ENST00000482961 USP20Q9Y2K6 914 aa5.7□□□□□ -1.5
GTDC1-216ENST00000482961 PRNPP04156 253 aa5.69□□□□□ -1.5
GTDC1-216ENST00000482961 OGFOD1Q8N543 542 aa5.69□□□□□ -1.5
GTDC1-216ENST00000482961 GAS2L2Q8NHY3 880 aa5.69□□□□□ -1.5
GTDC1-216ENST00000482961 LACRTQ9GZZ8 138 aa5.69□□□□□ -1.5
GTDC1-216ENST00000482961 PALM3A6NDB9 673 aaPredicted RBP5.68□□□□□ -1.5
GTDC1-216ENST00000482961 DDX3YO15523 660 aaKnown RBP5.68□□□□□ -1.5
GTDC1-216ENST00000482961 MMP20O60882 483 aa5.68□□□□□ -1.5
GTDC1-216ENST00000482961 XYLBO75191 536 aa5.68□□□□□ -1.5
GTDC1-216ENST00000482961 MICAL2O94851 1124 aa5.68□□□□□ -1.5
GTDC1-216ENST00000482961 F13BP05160 661 aa5.68□□□□□ -1.5
GTDC1-216ENST00000482961 PREPP48147 710 aa5.68□□□□□ -1.5
GTDC1-216ENST00000482961 LARGE2Q8N3Y3 721 aa5.68□□□□□ -1.5
GTDC1-216ENST00000482961 FLCNQ8NFG4 579 aa5.68□□□□□ -1.5
GTDC1-216ENST00000482961 UBASH3BQ8TF42 649 aa5.68□□□□□ -1.5
GTDC1-216ENST00000482961 FARP2O94887 1054 aaPredicted RBP5.67□□□□□ -1.5
GTDC1-216ENST00000482961 PAPLNO95428 1278 aa5.67□□□□□ -1.5
GTDC1-216ENST00000482961 DGKZQ13574 1117 aa5.67□□□□□ -1.5
GTDC1-216ENST00000482961 CMTR1Q8N1G2 835 aaKnown RBP5.67□□□□□ -1.5
GTDC1-216ENST00000482961 AGBL5Q8NDL9 886 aa5.67□□□□□ -1.5
GTDC1-216ENST00000482961 ZNF594Q96JF6 807 aaPredicted RBP5.67□□□□□ -1.5
GTDC1-216ENST00000482961 HIF3AQ9Y2N7 669 aa5.67□□□□□ -1.5
GTDC1-216ENST00000482961 RTCBQ9Y3I0 505 aaKnown RBP5.67□□□□□ -1.5
GTDC1-216ENST00000482961 FSCN2O14926 492 aa5.66□□□□□ -1.5
GTDC1-216ENST00000482961 GAS2O43903 313 aaKnown RBP5.66□□□□□ -1.5
GTDC1-216ENST00000482961 MAP4P27816 1152 aaKnown RBP5.66□□□□□ -1.5
GTDC1-216ENST00000482961 RXRBP28702 533 aa5.66□□□□□ -1.5
GTDC1-216ENST00000482961 ANKRD34AQ69YU3 496 aa5.66□□□□□ -1.5
GTDC1-216ENST00000482961 FAM117BQ6P1L5 589 aa5.66□□□□□ -1.5
GTDC1-216ENST00000482961 KSR1Q8IVT5 923 aa5.66□□□□□ -1.5
GTDC1-216ENST00000482961 KLHL23Q8NBE8 558 aa5.66□□□□□ -1.5
GTDC1-216ENST00000482961 FOXD4L4Q8WXT5 416 aaPredicted RBP5.66□□□□□ -1.5
GTDC1-216ENST00000482961 ALG2Q9H553 416 aa5.66□□□□□ -1.5
GTDC1-216ENST00000482961 BSDC1Q9NW68 430 aaPredicted RBP5.66□□□□□ -1.5
GTDC1-216ENST00000482961 TM4SF5O14894 197 aa5.65□□□□□ -1.5
GTDC1-216ENST00000482961 CYP26A1O43174 497 aa5.65□□□□□ -1.5
GTDC1-216ENST00000482961 EGFRP00533 1210 aa5.65□□□□□ -1.5
GTDC1-216ENST00000482961 CDC27P30260 824 aa5.65□□□□□ -1.5
GTDC1-216ENST00000482961 SOX18P35713 384 aa5.65□□□□□ -1.5
GTDC1-216ENST00000482961 CEP135Q66GS9 1140 aa5.65□□□□□ -1.5
GTDC1-216ENST00000482961 KRTAP5-3Q6L8H2 238 aa5.65□□□□□ -1.5
GTDC1-216ENST00000482961 FDX2Q6P4F2 183 aa5.65□□□□□ -1.5
GTDC1-216ENST00000482961 RGL4Q8IZJ4 473 aa5.65□□□□□ -1.5
GTDC1-216ENST00000482961 SIX5Q8N196 739 aa5.65□□□□□ -1.5
GTDC1-216ENST00000482961 USP17L3A6NCW0 530 aa5.64□□□□□ -1.51
GTDC1-216ENST00000482961 USP17L4A6NCW7 530 aa5.64□□□□□ -1.51
GTDC1-216ENST00000482961 BIN1O00499 593 aa5.64□□□□□ -1.51
GTDC1-216ENST00000482961 ADAM11O75078 769 aa5.64□□□□□ -1.51
GTDC1-216ENST00000482961 SGO2Q562F6 1265 aa5.64□□□□□ -1.51
GTDC1-216ENST00000482961 LILRA6Q6PI73 481 aa5.64□□□□□ -1.51
GTDC1-216ENST00000482961 USP17L2Q6R6M4 530 aa5.64□□□□□ -1.51
GTDC1-216ENST00000482961 USP17L1Q7RTZ2 530 aa5.64□□□□□ -1.51
GTDC1-216ENST00000482961 HINFPQ9BQA5 517 aa5.64□□□□□ -1.51
GTDC1-216ENST00000482961 RNF208Q9H0X6 261 aa5.64□□□□□ -1.51
GTDC1-216ENST00000482961 PAK6Q9NQU5 681 aaPredicted RBP5.64□□□□□ -1.51
GTDC1-216ENST00000482961 MKRN1Q9UHC7 482 aaKnown RBP5.64□□□□□ -1.51
GTDC1-216ENST00000482961 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.64□□□□□ -1.51
GTDC1-216ENST00000482961 OPLAHO14841 1288 aa5.63□□□□□ -1.51
GTDC1-216ENST00000482961 LGR5O75473 907 aa5.63□□□□□ -1.51
GTDC1-216ENST00000482961 ATP11AP98196 1134 aa5.63□□□□□ -1.51
GTDC1-216ENST00000482961 CPSF6Q16630 551 aaKnown RBP eCLIP5.63□□□□□ -1.51
GTDC1-216ENST00000482961 TMEM132AQ24JP5 1023 aa5.63□□□□□ -1.51
GTDC1-216ENST00000482961 PLEKHM2Q8IWE5 1019 aa5.63□□□□□ -1.51
GTDC1-216ENST00000482961 SHISA5Q8N114 240 aa5.63□□□□□ -1.51
GTDC1-216ENST00000482961 KLHDC7BQ96G42 594 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms