RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 RAB11FIP3O75154 756 aa19.02■□□□□ 0.63
CCM2-215ENST00000482714 CCDC93Q567U6 631 aa19.02■□□□□ 0.63
CCM2-215ENST00000482714 DCTPP1Q9H773 170 aa19.02■□□□□ 0.63
CCM2-215ENST00000482714 C21orf2O43822 256 aa19.01■□□□□ 0.63
CCM2-215ENST00000482714 GRIN3BO60391 1043 aa19.01■□□□□ 0.63
CCM2-215ENST00000482714 ERC1Q8IUD2 1116 aa19.01■□□□□ 0.63
CCM2-215ENST00000482714 MPNDQ8N594 471 aa19.01■□□□□ 0.63
CCM2-215ENST00000482714 VPS33BQ9H267 617 aa19.01■□□□□ 0.63
CCM2-215ENST00000482714 LEMD3Q9Y2U8 911 aa19.01■□□□□ 0.63
CCM2-215ENST00000482714 COL11A2P13942 1736 aaPredicted RBP19■□□□□ 0.63
CCM2-215ENST00000482714 ATG9AQ7Z3C6 839 aa19■□□□□ 0.63
CCM2-215ENST00000482714 SUPT20HQ8NEM7 779 aa19■□□□□ 0.63
CCM2-215ENST00000482714 KLHDC4Q8TBB5 520 aa19■□□□□ 0.63
CCM2-215ENST00000482714 CEP126Q9P2H0 1117 aa19■□□□□ 0.63
CCM2-215ENST00000482714 DCAF8L1A6NGE4 600 aa18.99■□□□□ 0.63
CCM2-215ENST00000482714 PDE8BO95263 885 aa18.99■□□□□ 0.63
CCM2-215ENST00000482714 CHRNDQ07001 517 aa18.99■□□□□ 0.63
CCM2-215ENST00000482714 LRRC24Q50LG9 513 aa18.99■□□□□ 0.63
CCM2-215ENST00000482714 GCC1Q96CN9 775 aa18.99■□□□□ 0.63
CCM2-215ENST00000482714 PUS3Q9BZE2 481 aaKnown RBP18.99■□□□□ 0.63
CCM2-215ENST00000482714 NSFL1CQ9UNZ2 370 aaKnown RBP18.99■□□□□ 0.63
CCM2-215ENST00000482714 PA2G4Q9UQ80 394 aaKnown RBP18.99■□□□□ 0.63
CCM2-215ENST00000482714 XDHP47989 1333 aa18.99■□□□□ 0.63
CCM2-215ENST00000482714 SLX4Q8IY92 1834 aa18.99■□□□□ 0.63
CCM2-215ENST00000482714 BRCA1P38398 1863 aaKnown RBP18.99■□□□□ 0.63
CCM2-215ENST00000482714 ATP2B4P23634 1241 aa18.98■□□□□ 0.63
CCM2-215ENST00000482714 PSMD1Q99460 953 aa18.98■□□□□ 0.63
CCM2-215ENST00000482714 RTFDC1Q9BY42 306 aaPredicted RBP18.98■□□□□ 0.63
CCM2-215ENST00000482714 ANKIB1Q9P2G1 1089 aa18.98■□□□□ 0.63
CCM2-215ENST00000482714 GOLGB1Q14789 3259 aaKnown RBP18.98■□□□□ 0.63
CCM2-215ENST00000482714 UBE4AQ14139 1066 aa18.97■□□□□ 0.63
CCM2-215ENST00000482714 GPR162Q16538 588 aa18.97■□□□□ 0.63
CCM2-215ENST00000482714 METTL24Q5JXM2 366 aa18.97■□□□□ 0.63
CCM2-215ENST00000482714 DPP8Q6V1X1 898 aaPredicted RBP18.97■□□□□ 0.63
CCM2-215ENST00000482714 GPR108Q9NPR9 543 aa18.97■□□□□ 0.63
CCM2-215ENST00000482714 AKAP2Q9Y2D5 859 aa18.97■□□□□ 0.63
CCM2-215ENST00000482714 OS9Q13438 667 aaPredicted RBP18.97■□□□□ 0.63
CCM2-215ENST00000482714 SIL1Q9H173 461 aa18.97■□□□□ 0.63
CCM2-215ENST00000482714 LTBP3Q9NS15 1303 aa18.96■□□□□ 0.63
CCM2-215ENST00000482714 TAF1P21675 1872 aa18.96■□□□□ 0.63
CCM2-215ENST00000482714 GPSM2P81274 684 aa18.96■□□□□ 0.63
CCM2-215ENST00000482714 KIF1BPQ96EK5 621 aa18.96■□□□□ 0.63
CCM2-215ENST00000482714 GGA1Q9UJY5 639 aa18.96■□□□□ 0.63
CCM2-215ENST00000482714 SASH1O94885 1247 aa18.95■□□□□ 0.62
CCM2-215ENST00000482714 FKBP4Q02790 459 aaKnown RBP eCLIP18.95■□□□□ 0.62
CCM2-215ENST00000482714 VGLL2Q8N8G2 317 aa18.95■□□□□ 0.62
CCM2-215ENST00000482714 EYA3Q99504 573 aa18.95■□□□□ 0.62
CCM2-215ENST00000482714 ZNF219Q9P2Y4 722 aaPredicted RBP18.95■□□□□ 0.62
CCM2-215ENST00000482714 C15orf52Q6ZUT6 534 aaKnown RBP18.94■□□□□ 0.62
CCM2-215ENST00000482714 TBC1D16Q8TBP0 767 aa18.94■□□□□ 0.62
CCM2-215ENST00000482714 EXOC6BQ9Y2D4 811 aa18.94■□□□□ 0.62
CCM2-215ENST00000482714 SNED1Q8TER0 1413 aa18.93■□□□□ 0.62
CCM2-215ENST00000482714 ARFGEF1Q9Y6D6 1849 aa18.93■□□□□ 0.62
CCM2-215ENST00000482714 ZNF804BA4D1E1 1349 aa18.93■□□□□ 0.62
CCM2-215ENST00000482714 YBX3P16989 372 aaKnown RBP eCLIP18.93■□□□□ 0.622e-6■■□□□ 12.1
CCM2-215ENST00000482714 PUM3Q15397 648 aaKnown RBP18.93■□□□□ 0.62
CCM2-215ENST00000482714 ARHGAP27Q6ZUM4 889 aa18.93■□□□□ 0.62
CCM2-215ENST00000482714 SMC5Q8IY18 1101 aa18.93■□□□□ 0.62
CCM2-215ENST00000482714 RHPN1Q8TCX5 695 aa18.93■□□□□ 0.62
CCM2-215ENST00000482714 TAOK3Q9H2K8 898 aa18.93■□□□□ 0.62
CCM2-215ENST00000482714 C6orf229H3BNL8 230 aa18.92■□□□□ 0.62
CCM2-215ENST00000482714 IGHDP01880 384 aa18.92■□□□□ 0.62
CCM2-215ENST00000482714 KCNJ4P48050 445 aa18.92■□□□□ 0.62
CCM2-215ENST00000482714 LPIN2Q92539 896 aa18.92■□□□□ 0.62
CCM2-215ENST00000482714 LRRCC1Q9C099 1032 aa18.92■□□□□ 0.62
CCM2-215ENST00000482714 ZC3H12CQ9C0D7 883 aaKnown RBP18.92■□□□□ 0.62
CCM2-215ENST00000482714 PPP4R2Q9NY27 417 aa18.92■□□□□ 0.62
CCM2-215ENST00000482714 POLLQ9UGP5 575 aa18.92■□□□□ 0.62
CCM2-215ENST00000482714 WWC3Q9ULE0 1092 aa18.92■□□□□ 0.62
CCM2-215ENST00000482714 TAF5LO75529 589 aa18.91■□□□□ 0.62
CCM2-215ENST00000482714 IFIT1P09914 478 aaKnown RBP18.91■□□□□ 0.62
CCM2-215ENST00000482714 FGFR2P21802 821 aa18.91■□□□□ 0.62
CCM2-215ENST00000482714 TFCP2Q12800 502 aa18.91■□□□□ 0.62
CCM2-215ENST00000482714 WASHC4Q2M389 1173 aa18.91■□□□□ 0.62
CCM2-215ENST00000482714 OLFM4Q6UX06 510 aa18.91■□□□□ 0.62
CCM2-215ENST00000482714 PELP1Q8IZL8 1130 aaKnown RBP18.91■□□□□ 0.62
CCM2-215ENST00000482714 CLASRPQ8N2M8 674 aaKnown RBP18.91■□□□□ 0.62
CCM2-215ENST00000482714 HELBQ8NG08 1087 aaPredicted RBP18.91■□□□□ 0.62
CCM2-215ENST00000482714 LRRC37AA6NMS7 1700 aa18.91■□□□□ 0.62
CCM2-215ENST00000482714 ZBTB22O15209 634 aa18.9■□□□□ 0.62
CCM2-215ENST00000482714 UFL1O94874 794 aa18.9■□□□□ 0.62
CCM2-215ENST00000482714 COL4A1P02462 1669 aa18.9■□□□□ 0.62
CCM2-215ENST00000482714 NFKBIEO00221 500 aa18.9■□□□□ 0.62
CCM2-215ENST00000482714 SLC5A1P13866 664 aa18.9■□□□□ 0.62
CCM2-215ENST00000482714 ATP2B3Q16720 1220 aa18.9■□□□□ 0.62
CCM2-215ENST00000482714 ZBTB47Q9UFB7 747 aaPredicted RBP18.9■□□□□ 0.62
CCM2-215ENST00000482714 KIAA2012Q0VF49 1180 aa18.89■□□□□ 0.61
CCM2-215ENST00000482714 CCDC136Q96JN2 1154 aa18.89■□□□□ 0.61
CCM2-215ENST00000482714 TNNI3KQ59H18 835 aa18.88■□□□□ 0.61
CCM2-215ENST00000482714 CAVIN4Q5BKX8 364 aa18.88■□□□□ 0.61
CCM2-215ENST00000482714 FPGT-TNNI3KV9GXZ4 949 aa18.88■□□□□ 0.61
CCM2-215ENST00000482714 MED23Q9ULK4 1368 aa18.88■□□□□ 0.61
CCM2-215ENST00000482714 A0A1B0GUL7 405 aa18.87■□□□□ 0.61
CCM2-215ENST00000482714 LMNB1P20700 586 aa18.87■□□□□ 0.61
CCM2-215ENST00000482714 IARSP41252 1262 aaKnown RBP18.87■□□□□ 0.61
CCM2-215ENST00000482714 TIMM10P62072 90 aa18.87■□□□□ 0.61
CCM2-215ENST00000482714 CENPQQ7L2Z9 268 aaPredicted RBP18.87■□□□□ 0.61
CCM2-215ENST00000482714 CACNA1SQ13698 1873 aa18.87■□□□□ 0.61
CCM2-215ENST00000482714 FER1L6Q2WGJ9 1857 aa18.86■□□□□ 0.61
CCM2-215ENST00000482714 ANKRD45Q5TZF3 282 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms