RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 MICU3Q86XE3 530 aa10.74□□□□□ -0.69
CALD1-220ENST00000482470 RASSF8Q8NHQ8 419 aa10.74□□□□□ -0.69
CALD1-220ENST00000482470 EYA2O00167 538 aa10.73□□□□□ -0.69
CALD1-220ENST00000482470 SMC2O95347 1197 aa10.73□□□□□ -0.69
CALD1-220ENST00000482470 TDO2P48775 406 aa10.73□□□□□ -0.69
CALD1-220ENST00000482470 PIP4K2BP78356 416 aa10.73□□□□□ -0.69
CALD1-220ENST00000482470 ATP2B3Q16720 1220 aa10.73□□□□□ -0.69
CALD1-220ENST00000482470 TTLL5Q6EMB2 1281 aa10.73□□□□□ -0.69
CALD1-220ENST00000482470 KLF18A0A0U1RQI7 1052 aa10.73□□□□□ -0.69
CALD1-220ENST00000482470 DDIT3P35638 169 aa10.73□□□□□ -0.69
CALD1-220ENST00000482470 ZNF165P49910 485 aa10.73□□□□□ -0.69
CALD1-220ENST00000482470 SLC9C2Q5TAH2 1124 aa10.73□□□□□ -0.69
CALD1-220ENST00000482470 ZSWIM6Q9HCJ5 1215 aa10.73□□□□□ -0.69
CALD1-220ENST00000482470 BTG4Q9NY30 223 aa10.73□□□□□ -0.69
CALD1-220ENST00000482470 ORC3Q9UBD5 711 aaPredicted RBP10.73□□□□□ -0.69
CALD1-220ENST00000482470 MTMR6Q9Y217 621 aa10.73□□□□□ -0.69
CALD1-220ENST00000482470 ERBB4Q15303 1308 aa10.73□□□□□ -0.69
CALD1-220ENST00000482470 RGS12O14924 1447 aa10.73□□□□□ -0.69
CALD1-220ENST00000482470 MINDY4BA8MYZ0 360 aa10.73□□□□□ -0.69
CALD1-220ENST00000482470 FSIP1Q8NA03 581 aa10.73□□□□□ -0.69
CALD1-220ENST00000482470 HMGB1P09429 215 aaKnown RBP10.72□□□□□ -0.69
CALD1-220ENST00000482470 PTPN12Q05209 780 aaKnown RBP10.72□□□□□ -0.69
CALD1-220ENST00000482470 ANO6Q4KMQ2 910 aa10.72□□□□□ -0.69
CALD1-220ENST00000482470 LUZP1Q86V48 1076 aa10.72□□□□□ -0.69
CALD1-220ENST00000482470 MAP4K1Q92918 833 aa10.72□□□□□ -0.69
CALD1-220ENST00000482470 ZKSCAN5Q9Y2L8 839 aa10.72□□□□□ -0.69
CALD1-220ENST00000482470 ATP5JP18859 108 aa10.72□□□□□ -0.69
CALD1-220ENST00000482470 SAFBQ15424 915 aaKnown RBP eCLIP10.72□□□□□ -0.69
CALD1-220ENST00000482470 TPD52L1Q16890 204 aaPredicted RBP10.72□□□□□ -0.69
CALD1-220ENST00000482470 KBTBD3Q8NAB2 608 aa10.72□□□□□ -0.69
CALD1-220ENST00000482470 DNAJC25Q9H1X3 360 aa10.72□□□□□ -0.69
CALD1-220ENST00000482470 NPHP4O75161 1426 aaPredicted RBP10.72□□□□□ -0.69
CALD1-220ENST00000482470 ANKARQ7Z5J8 1434 aa10.72□□□□□ -0.69
CALD1-220ENST00000482470 PTPDC1A2A3K4 754 aa10.72□□□□□ -0.69
CALD1-220ENST00000482470 TPM2P07951 284 aa10.72□□□□□ -0.69
CALD1-220ENST00000482470 DHX32Q7L7V1 743 aaKnown RBP10.72□□□□□ -0.69
CALD1-220ENST00000482470 CCAR1Q8IX12 1150 aaKnown RBP10.72□□□□□ -0.69
CALD1-220ENST00000482470 RAI14Q9P0K7 980 aa10.72□□□□□ -0.69
CALD1-220ENST00000482470 RNF113AO15541 343 aaKnown RBP10.71□□□□□ -0.69
CALD1-220ENST00000482470 TAF5LO75529 589 aa10.71□□□□□ -0.69
CALD1-220ENST00000482470 ERCC4Q92889 916 aaPredicted RBP10.71□□□□□ -0.69
CALD1-220ENST00000482470 HMGN5P82970 282 aaKnown RBP10.71□□□□□ -0.69
CALD1-220ENST00000482470 NAPBQ9H115 298 aa10.71□□□□□ -0.69
CALD1-220ENST00000482470 PCDH11XQ9BZA7 1347 aa10.71□□□□□ -0.7
CALD1-220ENST00000482470 PCDH11YQ9BZA8 1340 aa10.71□□□□□ -0.7
CALD1-220ENST00000482470 CDK11BP21127 795 aaKnown RBP10.71□□□□□ -0.7
CALD1-220ENST00000482470 PLCD3Q8N3E9 789 aa10.71□□□□□ -0.7
CALD1-220ENST00000482470 XAGE2Q96GT9 111 aa10.71□□□□□ -0.7
CALD1-220ENST00000482470 ASAP1Q9ULH1 1129 aa10.71□□□□□ -0.7
CALD1-220ENST00000482470 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.71□□□□□ -0.7
CALD1-220ENST00000482470 SSH2Q76I76 1423 aa10.7□□□□□ -0.7
CALD1-220ENST00000482470 CCDC69A6NI79 296 aa10.7□□□□□ -0.7
CALD1-220ENST00000482470 LIG1P18858 919 aa10.7□□□□□ -0.7
CALD1-220ENST00000482470 SLC4A8Q2Y0W8 1093 aa10.7□□□□□ -0.7
CALD1-220ENST00000482470 PAXIP1Q6ZW49 1069 aaPredicted RBP10.7□□□□□ -0.7
CALD1-220ENST00000482470 COPRSQ9NQ92 184 aa10.7□□□□□ -0.7
CALD1-220ENST00000482470 SLAIN2Q9P270 581 aa10.7□□□□□ -0.7
CALD1-220ENST00000482470 KIF20BQ96Q89 1820 aa10.7□□□□□ -0.7
CALD1-220ENST00000482470 PES1O00541 588 aaKnown RBP10.7□□□□□ -0.7
CALD1-220ENST00000482470 IRS4O14654 1257 aaPredicted RBP10.7□□□□□ -0.7
CALD1-220ENST00000482470 CYP21A2P08686 494 aa10.7□□□□□ -0.7
CALD1-220ENST00000482470 TYRO3Q06418 890 aa10.7□□□□□ -0.7
CALD1-220ENST00000482470 NECTIN1Q15223 517 aa10.7□□□□□ -0.7
CALD1-220ENST00000482470 ZSCAN25Q6NSZ9 544 aa10.7□□□□□ -0.7
CALD1-220ENST00000482470 TTC6Q86TZ1 520 aa10.7□□□□□ -0.7
CALD1-220ENST00000482470 TM6SF1Q9BZW5 370 aa10.7□□□□□ -0.7
CALD1-220ENST00000482470 NRKQ7Z2Y5 1582 aa10.7□□□□□ -0.7
CALD1-220ENST00000482470 PRC1O43663 620 aa10.7□□□□□ -0.7
CALD1-220ENST00000482470 CYP2E1P05181 493 aaPredicted RBP10.7□□□□□ -0.7
CALD1-220ENST00000482470 ZAP70P43403 619 aa10.7□□□□□ -0.7
CALD1-220ENST00000482470 PI16Q6UXB8 463 aa10.7□□□□□ -0.7
CALD1-220ENST00000482470 DDX19AQ9NUU7 478 aaKnown RBP10.7□□□□□ -0.7
CALD1-220ENST00000482470 TAF6LQ9Y6J9 622 aa10.7□□□□□ -0.7
CALD1-220ENST00000482470 IGHMBP2P38935 993 aaKnown RBP10.69□□□□□ -0.7
CALD1-220ENST00000482470 SART3Q15020 963 aaKnown RBP10.69□□□□□ -0.7
CALD1-220ENST00000482470 HOMER1Q86YM7 354 aa10.69□□□□□ -0.7
CALD1-220ENST00000482470 CCDC191Q8NCU4 936 aa10.69□□□□□ -0.7
CALD1-220ENST00000482470 NAT10Q9H0A0 1025 aaKnown RBP10.69□□□□□ -0.7
CALD1-220ENST00000482470 IFIT3O14879 490 aaKnown RBP10.69□□□□□ -0.7
CALD1-220ENST00000482470 MARCKSP29966 332 aaPredicted RBP10.69□□□□□ -0.7
CALD1-220ENST00000482470 ADORA1P30542 326 aa10.69□□□□□ -0.7
CALD1-220ENST00000482470 SYNE4Q8N205 404 aa10.69□□□□□ -0.7
CALD1-220ENST00000482470 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.69□□□□□ -0.7
CALD1-220ENST00000482470 ITGA6P23229 1130 aa10.69□□□□□ -0.7
CALD1-220ENST00000482470 MCM5P33992 734 aa10.69□□□□□ -0.7
CALD1-220ENST00000482470 CCDC186Q7Z3E2 898 aa10.69□□□□□ -0.7
CALD1-220ENST00000482470 NCOA7Q8NI08 942 aa10.69□□□□□ -0.7
CALD1-220ENST00000482470 DIP2AQ14689 1571 aa10.69□□□□□ -0.7
CALD1-220ENST00000482470 MTX1Q13505 466 aa10.68□□□□□ -0.7
CALD1-220ENST00000482470 DZIP3Q86Y13 1208 aaKnown RBP10.68□□□□□ -0.7
CALD1-220ENST00000482470 NACAP1Q9BZK3 213 aa10.68□□□□□ -0.7
CALD1-220ENST00000482470 AK9Q5TCS8 1911 aa10.68□□□□□ -0.7
CALD1-220ENST00000482470 PDILTQ8N807 584 aa10.68□□□□□ -0.7
CALD1-220ENST00000482470 FAM200AQ8TCP9 573 aa10.68□□□□□ -0.7
CALD1-220ENST00000482470 C16orf45Q96MC5 204 aaPredicted RBP10.68□□□□□ -0.7
CALD1-220ENST00000482470 PPP1R9BQ96SB3 815 aa10.68□□□□□ -0.7
CALD1-220ENST00000482470 CLIP2Q9UDT6 1046 aa10.68□□□□□ -0.7
CALD1-220ENST00000482470 NOL7Q9UMY1 257 aaKnown RBP10.68□□□□□ -0.7
CALD1-220ENST00000482470 CEP57L1Q8IYX8 460 aa10.68□□□□□ -0.7
CALD1-220ENST00000482470 MIGA1Q8NAN2 632 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms