RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 RASSF10A6NK89 507 aa17.22■□□□□ 0.35
CTDSP1-208ENST00000482272 CWF19L2Q2TBE0 894 aaKnown RBP17.22■□□□□ 0.35
CTDSP1-208ENST00000482272 ANKRD18AQ8IVF6 992 aa17.22■□□□□ 0.35
CTDSP1-208ENST00000482272 ZC3H15Q8WU90 426 aaKnown RBP17.22■□□□□ 0.35
CTDSP1-208ENST00000482272 CCDC85AQ96PX6 553 aaPredicted RBP17.22■□□□□ 0.35
CTDSP1-208ENST00000482272 DOK7Q18PE1 504 aa17.21■□□□□ 0.35
CTDSP1-208ENST00000482272 DPF2Q92785 391 aa17.21■□□□□ 0.35
CTDSP1-208ENST00000482272 PGAP2Q9UHJ9 254 aa17.21■□□□□ 0.35
CTDSP1-208ENST00000482272 GGA1Q9UJY5 639 aa17.21■□□□□ 0.35
CTDSP1-208ENST00000482272 ZNF646O15015 1829 aaPredicted RBP17.21■□□□□ 0.35
CTDSP1-208ENST00000482272 PSMD14O00487 310 aa17.2■□□□□ 0.34
CTDSP1-208ENST00000482272 ECE2O60344 883 aa17.2■□□□□ 0.34
CTDSP1-208ENST00000482272 VAMP4O75379 141 aa17.2■□□□□ 0.34
CTDSP1-208ENST00000482272 EXOSC9Q06265 439 aaKnown RBP17.2■□□□□ 0.34
CTDSP1-208ENST00000482272 FAM9BQ8IZU0 186 aa17.2■□□□□ 0.34
CTDSP1-208ENST00000482272 CDC5LQ99459 802 aaKnown RBP17.2■□□□□ 0.34
CTDSP1-208ENST00000482272 KCNQ5Q9NR82 932 aa17.2■□□□□ 0.34
CTDSP1-208ENST00000482272 CACNA1FO60840 1977 aa17.19■□□□□ 0.34
CTDSP1-208ENST00000482272 WTIPA6NIX2 430 aaPredicted RBP17.19■□□□□ 0.34
CTDSP1-208ENST00000482272 NEURL1BA8MQ27 555 aa17.19■□□□□ 0.34
CTDSP1-208ENST00000482272 UFL1O94874 794 aa17.19■□□□□ 0.34
CTDSP1-208ENST00000482272 RPS12P25398 132 aaKnown RBP17.19■□□□□ 0.34
CTDSP1-208ENST00000482272 CTSWP56202 376 aa17.19■□□□□ 0.34
CTDSP1-208ENST00000482272 CDC37L1Q7L3B6 337 aa17.19■□□□□ 0.34
CTDSP1-208ENST00000482272 MICALL2Q8IY33 904 aa17.19■□□□□ 0.34
CTDSP1-208ENST00000482272 TTLL11Q8NHH1 800 aa17.19■□□□□ 0.34
CTDSP1-208ENST00000482272 AIDAQ96BJ3 306 aa17.19■□□□□ 0.34
CTDSP1-208ENST00000482272 ZBTB12Q9Y330 459 aaPredicted RBP17.19■□□□□ 0.34
CTDSP1-208ENST00000482272 WDR33Q9C0J8 1336 aaKnown RBP17.19■□□□□ 0.34
CTDSP1-208ENST00000482272 RTL9Q8NET4 1388 aa17.18■□□□□ 0.34
CTDSP1-208ENST00000482272 H7C1W4 665 aa17.18■□□□□ 0.34
CTDSP1-208ENST00000482272 TRAF5O00463 557 aa17.18■□□□□ 0.34
CTDSP1-208ENST00000482272 HIRAP54198 1017 aaPredicted RBP17.18■□□□□ 0.34
CTDSP1-208ENST00000482272 FLIIQ13045 1269 aa17.18■□□□□ 0.34
CTDSP1-208ENST00000482272 FKBP5Q13451 457 aaPredicted RBP17.18■□□□□ 0.34
CTDSP1-208ENST00000482272 CST9Q5W186 159 aa17.18■□□□□ 0.34
CTDSP1-208ENST00000482272 TNS4Q8IZW8 715 aa17.18■□□□□ 0.34
CTDSP1-208ENST00000482272 PSME4Q14997 1843 aa17.18■□□□□ 0.34
CTDSP1-208ENST00000482272 ATP2B4P23634 1241 aa17.17■□□□□ 0.34
CTDSP1-208ENST00000482272 ECE1P42892 770 aa17.17■□□□□ 0.34
CTDSP1-208ENST00000482272 PAXIP1Q6ZW49 1069 aaPredicted RBP17.17■□□□□ 0.34
CTDSP1-208ENST00000482272 TRPM7Q96QT4 1865 aa17.17■□□□□ 0.34
CTDSP1-208ENST00000482272 MYH16Q9H6N6 1097 aa17.17■□□□□ 0.34
CTDSP1-208ENST00000482272 A0A1B0GUL6 1792 aa17.17■□□□□ 0.34
CTDSP1-208ENST00000482272 XDHP47989 1333 aa17.17■□□□□ 0.34
CTDSP1-208ENST00000482272 ZNF521Q96K83 1311 aa17.17■□□□□ 0.34
CTDSP1-208ENST00000482272 CASP7P55210 303 aa17.16■□□□□ 0.34
CTDSP1-208ENST00000482272 GCKRQ14397 625 aa17.16■□□□□ 0.34
CTDSP1-208ENST00000482272 SAMD7Q7Z3H4 446 aa17.16■□□□□ 0.34
CTDSP1-208ENST00000482272 UBE3BQ7Z3V4 1068 aa17.16■□□□□ 0.34
CTDSP1-208ENST00000482272 TRPM4Q8TD43 1214 aa17.16■□□□□ 0.34
CTDSP1-208ENST00000482272 DNAAF4Q8WXU2 420 aa17.16■□□□□ 0.34
CTDSP1-208ENST00000482272 GLIS2Q9BZE0 524 aaPredicted RBP17.16■□□□□ 0.34
CTDSP1-208ENST00000482272 BSDC1Q9NW68 430 aaPredicted RBP17.16■□□□□ 0.34
CTDSP1-208ENST00000482272 TLL2Q9Y6L7 1015 aa17.16■□□□□ 0.34
CTDSP1-208ENST00000482272 CELF2O95319 508 aaKnown RBP17.15■□□□□ 0.34
CTDSP1-208ENST00000482272 VIL1P09327 827 aaKnown RBP17.15■□□□□ 0.34
CTDSP1-208ENST00000482272 MAP2K1Q02750 393 aaPredicted RBP17.15■□□□□ 0.34
CTDSP1-208ENST00000482272 RBM26Q5T8P6 1007 aaKnown RBP17.15■□□□□ 0.34
CTDSP1-208ENST00000482272 LINS1Q8NG48 757 aa17.15■□□□□ 0.34
CTDSP1-208ENST00000482272 GREM2Q9H772 168 aa17.15■□□□□ 0.34
CTDSP1-208ENST00000482272 WBP1LQ9NX94 342 aa17.15■□□□□ 0.34
CTDSP1-208ENST00000482272 F6X3S4 739 aa17.14■□□□□ 0.33
CTDSP1-208ENST00000482272 FOXN1O15353 648 aa17.14■□□□□ 0.33
CTDSP1-208ENST00000482272 EGFRP00533 1210 aa17.14■□□□□ 0.33
CTDSP1-208ENST00000482272 IGHMBP2P38935 993 aaKnown RBP17.14■□□□□ 0.33
CTDSP1-208ENST00000482272 CTCFP49711 727 aaPredicted RBP17.14■□□□□ 0.33
CTDSP1-208ENST00000482272 PODNQ7Z5L7 613 aa17.14■□□□□ 0.33
CTDSP1-208ENST00000482272 CAPNS2Q96L46 248 aa17.14■□□□□ 0.33
CTDSP1-208ENST00000482272 PLA2G12BQ9BX93 195 aa17.14■□□□□ 0.33
CTDSP1-208ENST00000482272 MINPP1Q9UNW1 487 aa17.14■□□□□ 0.33
CTDSP1-208ENST00000482272 THSD7BQ9C0I4 1608 aa17.14■□□□□ 0.33
CTDSP1-208ENST00000482272 TBC1D10BQ4KMP7 808 aaPredicted RBP17.13■□□□□ 0.33
CTDSP1-208ENST00000482272 USP48Q86UV5 1035 aa17.13■□□□□ 0.33
CTDSP1-208ENST00000482272 AGBL3Q8NEM8 1001 aa17.13■□□□□ 0.33
CTDSP1-208ENST00000482272 DCPSQ96C86 337 aaKnown RBP17.13■□□□□ 0.33
CTDSP1-208ENST00000482272 ZNF408Q9H9D4 720 aa17.13■□□□□ 0.33
CTDSP1-208ENST00000482272 GRM1Q13255 1194 aa17.12■□□□□ 0.33
CTDSP1-208ENST00000482272 CYP4F22Q6NT55 531 aa17.12■□□□□ 0.33
CTDSP1-208ENST00000482272 DLK2Q6UY11 383 aa17.12■□□□□ 0.33
CTDSP1-208ENST00000482272 MPHOSPH8Q99549 860 aa17.12■□□□□ 0.33
CTDSP1-208ENST00000482272 PRDM10Q9NQV6 1147 aa17.12■□□□□ 0.33
CTDSP1-208ENST00000482272 CSF1RP07333 972 aa17.11■□□□□ 0.33
CTDSP1-208ENST00000482272 ITGA6P23229 1130 aa17.11■□□□□ 0.33
CTDSP1-208ENST00000482272 CCT4P50991 539 aaKnown RBP17.11■□□□□ 0.33
CTDSP1-208ENST00000482272 RSBN1LQ6PCB5 846 aaPredicted RBP17.11■□□□□ 0.33
CTDSP1-208ENST00000482272 SAPCD2Q86UD0 394 aa17.11■□□□□ 0.33
CTDSP1-208ENST00000482272 HHIPL1Q96JK4 782 aa17.11■□□□□ 0.33
CTDSP1-208ENST00000482272 BEGAINQ9BUH8 593 aa17.11■□□□□ 0.33
CTDSP1-208ENST00000482272 LEMD3Q9Y2U8 911 aa17.11■□□□□ 0.33
CTDSP1-208ENST00000482272 USP17L3A6NCW0 530 aa17.1■□□□□ 0.33
CTDSP1-208ENST00000482272 USP17L4A6NCW7 530 aa17.1■□□□□ 0.33
CTDSP1-208ENST00000482272 MAP2K2P36507 400 aa17.1■□□□□ 0.33
CTDSP1-208ENST00000482272 KIF4BQ2VIQ3 1234 aa17.1■□□□□ 0.33
CTDSP1-208ENST00000482272 USP17L1Q7RTZ2 530 aa17.1■□□□□ 0.33
CTDSP1-208ENST00000482272 KRT26Q7Z3Y9 468 aa17.1■□□□□ 0.33
CTDSP1-208ENST00000482272 ANKRD2Q9GZV1 360 aa17.1■□□□□ 0.33
CTDSP1-208ENST00000482272 FAM161AQ3B820 660 aa17.09■□□□□ 0.33
CTDSP1-208ENST00000482272 BEND3Q5T5X7 828 aa17.09■□□□□ 0.33
CTDSP1-208ENST00000482272 MED23Q9ULK4 1368 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms