RNA–Protein interactions for RNA: ENST00000482270.5

LIMK2-209, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-209ENST00000482270 MAN1A2O60476 641 aa12.51□□□□□ -0.41
LIMK2-209ENST00000482270 ERVK-9P63128 1117 aa12.51□□□□□ -0.41
LIMK2-209ENST00000482270 HDGFL1Q5TGJ6 251 aa12.51□□□□□ -0.41
LIMK2-209ENST00000482270 ALG2Q9H553 416 aa12.51□□□□□ -0.41
LIMK2-209ENST00000482270 LRRC37A3O60309 1634 aa12.51□□□□□ -0.41
LIMK2-209ENST00000482270 CCDC125Q86Z20 511 aa12.5□□□□□ -0.41
LIMK2-209ENST00000482270 SLC12A5Q9H2X9 1139 aa12.5□□□□□ -0.41
LIMK2-209ENST00000482270 SBF2Q86WG5 1849 aa12.49□□□□□ -0.41
LIMK2-209ENST00000482270 TTC21AQ8NDW8 1320 aa12.49□□□□□ -0.41
LIMK2-209ENST00000482270 ATP5J2-PTCD1G3V325 749 aa12.49□□□□□ -0.41
LIMK2-209ENST00000482270 MYCP01106 439 aaPredicted RBP12.49□□□□□ -0.41
LIMK2-209ENST00000482270 SKIP12755 728 aa12.49□□□□□ -0.41
LIMK2-209ENST00000482270 CTSOP43234 321 aaPredicted RBP12.49□□□□□ -0.41
LIMK2-209ENST00000482270 SF3B2Q13435 895 aaKnown RBP12.49□□□□□ -0.41
LIMK2-209ENST00000482270 NME9Q86XW9 330 aa12.49□□□□□ -0.41
LIMK2-209ENST00000482270 PHTF2Q8N3S3 785 aa12.49□□□□□ -0.41
LIMK2-209ENST00000482270 PLPP7Q8NBV4 271 aa12.49□□□□□ -0.41
LIMK2-209ENST00000482270 RAB6BQ9NRW1 208 aa12.49□□□□□ -0.41
LIMK2-209ENST00000482270 KIF20BQ96Q89 1820 aa12.48□□□□□ -0.41
LIMK2-209ENST00000482270 A0A1W2PP64 1363 aa12.48□□□□□ -0.41
LIMK2-209ENST00000482270 AATKQ6ZMQ8 1374 aa12.48□□□□□ -0.41
LIMK2-209ENST00000482270 USP47Q96K76 1375 aa12.48□□□□□ -0.41
LIMK2-209ENST00000482270 MEN1O00255 615 aa12.48□□□□□ -0.41
LIMK2-209ENST00000482270 GLMNQ92990 594 aa12.48□□□□□ -0.41
LIMK2-209ENST00000482270 TESK2Q96S53 571 aa12.48□□□□□ -0.41
LIMK2-209ENST00000482270 OSBPL3Q9H4L5 887 aa12.48□□□□□ -0.41
LIMK2-209ENST00000482270 TIMELESSQ9UNS1 1208 aa12.48□□□□□ -0.41
LIMK2-209ENST00000482270 MYOM1P52179 1685 aa12.48□□□□□ -0.41
LIMK2-209ENST00000482270 CRB1P82279 1406 aa12.47□□□□□ -0.41
LIMK2-209ENST00000482270 A6NJR5 290 aa12.47□□□□□ -0.41
LIMK2-209ENST00000482270 TTLL8A6PVC2 850 aa12.47□□□□□ -0.41
LIMK2-209ENST00000482270 SPINT1O43278 529 aa12.47□□□□□ -0.41
LIMK2-209ENST00000482270 PTGIRP43119 386 aa12.47□□□□□ -0.41
LIMK2-209ENST00000482270 HDGFL2Q7Z4V5 671 aaPredicted RBP12.47□□□□□ -0.41
LIMK2-209ENST00000482270 DEPDC4Q8N2C3 294 aa12.47□□□□□ -0.41
LIMK2-209ENST00000482270 KDF1Q8NAX2 398 aaPredicted RBP12.47□□□□□ -0.41
LIMK2-209ENST00000482270 ARHGEF10LQ9HCE6 1279 aa12.47□□□□□ -0.41
LIMK2-209ENST00000482270 DNMT3LQ9UJW3 386 aa12.47□□□□□ -0.41
LIMK2-209ENST00000482270 RGPD2P0DJD1 1756 aa12.46□□□□□ -0.41
LIMK2-209ENST00000482270 STAU1O95793 577 aaKnown RBP12.46□□□□□ -0.41
LIMK2-209ENST00000482270 CYP2U1Q7Z449 544 aa12.46□□□□□ -0.41
LIMK2-209ENST00000482270 TCP11L2Q8N4U5 519 aa12.46□□□□□ -0.41
LIMK2-209ENST00000482270 ZNF775Q96BV0 537 aaPredicted RBP12.46□□□□□ -0.41
LIMK2-209ENST00000482270 EDC4Q6P2E9 1401 aaKnown RBP12.45□□□□□ -0.42
LIMK2-209ENST00000482270 PEAK1Q9H792 1746 aa12.45□□□□□ -0.42
LIMK2-209ENST00000482270 TOM1L2Q6ZVM7 507 aa12.45□□□□□ -0.42
LIMK2-209ENST00000482270 ARHGEF25Q86VW2 580 aa12.45□□□□□ -0.42
LIMK2-209ENST00000482270 KCNH5Q8NCM2 988 aa12.45□□□□□ -0.42
LIMK2-209ENST00000482270 TRIM37O94972 964 aa12.44□□□□□ -0.42
LIMK2-209ENST00000482270 VEGFBP49765 207 aa12.44□□□□□ -0.42
LIMK2-209ENST00000482270 TERF2IPQ9NYB0 399 aa12.44□□□□□ -0.42
LIMK2-209ENST00000482270 RREB1Q92766 1687 aa12.44□□□□□ -0.42
LIMK2-209ENST00000482270 USP31Q70CQ4 1352 aa12.43□□□□□ -0.42
LIMK2-209ENST00000482270 SRCAPQ6ZRS2 3230 aa12.43□□□□□ -0.42
LIMK2-209ENST00000482270 WDR17Q8IZU2 1322 aa12.43□□□□□ -0.42
LIMK2-209ENST00000482270 NUP188Q5SRE5 1749 aa12.43□□□□□ -0.42
LIMK2-209ENST00000482270 CSB-PGBD3P0DP91 1061 aa12.43□□□□□ -0.42
LIMK2-209ENST00000482270 BAG6P46379 1132 aa12.43□□□□□ -0.42
LIMK2-209ENST00000482270 PDE3BQ13370 1112 aa12.43□□□□□ -0.42
LIMK2-209ENST00000482270 CALR3Q96L12 384 aaKnown RBP12.43□□□□□ -0.42
LIMK2-209ENST00000482270 UCN2Q96RP3 112 aa12.43□□□□□ -0.42
LIMK2-209ENST00000482270 ABCC6O95255 1503 aa12.42□□□□□ -0.42
LIMK2-209ENST00000482270 A0A1W2PRU2 124 aa12.42□□□□□ -0.42
LIMK2-209ENST00000482270 THRAP3Q9Y2W1 955 aaKnown RBP12.42□□□□□ -0.42
LIMK2-209ENST00000482270 OVOS2A0A0J9YW53 1432 aa12.42□□□□□ -0.42
LIMK2-209ENST00000482270 OVOS2Q6IE36 1432 aa12.42□□□□□ -0.42
LIMK2-209ENST00000482270 TRAK2O60296 914 aa12.41□□□□□ -0.42
LIMK2-209ENST00000482270 TMF1P82094 1093 aa12.41□□□□□ -0.42
LIMK2-209ENST00000482270 USP4Q13107 963 aa12.41□□□□□ -0.42
LIMK2-209ENST00000482270 FAM196AQ6ZSG2 479 aa12.41□□□□□ -0.42
LIMK2-209ENST00000482270 TBC1D9Q6ZT07 1266 aa12.41□□□□□ -0.42
LIMK2-209ENST00000482270 FAM208AQ9UK61 1670 aaKnown RBP12.41□□□□□ -0.42
LIMK2-209ENST00000482270 NINLQ9Y2I6 1382 aa12.41□□□□□ -0.42
LIMK2-209ENST00000482270 USP17L5A8MUK1 530 aa12.4□□□□□ -0.42
LIMK2-209ENST00000482270 NCOA4Q13772 614 aa12.4□□□□□ -0.42
LIMK2-209ENST00000482270 FOXD4L5Q5VV16 416 aaPredicted RBP12.4□□□□□ -0.42
LIMK2-209ENST00000482270 PUS7Q96PZ0 661 aaKnown RBP12.4□□□□□ -0.42
LIMK2-209ENST00000482270 KAT6BQ8WYB5 2073 aa12.4□□□□□ -0.42
LIMK2-209ENST00000482270 EZH2Q15910 746 aaKnown RBP12.39□□□□□ -0.43
LIMK2-209ENST00000482270 MAP7D1Q3KQU3 841 aa12.39□□□□□ -0.43
LIMK2-209ENST00000482270 RNF217Q8TC41 542 aa12.39□□□□□ -0.43
LIMK2-209ENST00000482270 NLRP3Q96P20 1036 aa12.39□□□□□ -0.43
LIMK2-209ENST00000482270 ANKRD36BQ8N2N9 1353 aa12.39□□□□□ -0.43
LIMK2-209ENST00000482270 APBA3O96018 575 aa12.38□□□□□ -0.43
LIMK2-209ENST00000482270 FBLN1P23142 703 aa12.38□□□□□ -0.43
LIMK2-209ENST00000482270 DDB1Q16531 1140 aa12.38□□□□□ -0.43
LIMK2-209ENST00000482270 EML3Q32P44 896 aa12.38□□□□□ -0.43
LIMK2-209ENST00000482270 PRICKLE2Q7Z3G6 844 aa12.38□□□□□ -0.43
LIMK2-209ENST00000482270 OVOS2A0A0G2JMS6 1433 aa12.37□□□□□ -0.43
LIMK2-209ENST00000482270 DISP2A7MBM2 1401 aa12.37□□□□□ -0.43
LIMK2-209ENST00000482270 RHOQP17081 205 aa12.37□□□□□ -0.43
LIMK2-209ENST00000482270 ANKRD24Q8TF21 1146 aa12.37□□□□□ -0.43
LIMK2-209ENST00000482270 LTV1Q96GA3 475 aaPredicted RBP12.37□□□□□ -0.43
LIMK2-209ENST00000482270 CARD10Q9BWT7 1032 aa12.37□□□□□ -0.43
LIMK2-209ENST00000482270 NLRP2Q9NX02 1062 aa12.37□□□□□ -0.43
LIMK2-209ENST00000482270 RGPD3A6NKT7 1758 aaPredicted RBP12.36□□□□□ -0.43
LIMK2-209ENST00000482270 RGPD4Q7Z3J3 1758 aa12.36□□□□□ -0.43
LIMK2-209ENST00000482270 USP17L3A6NCW0 530 aa12.36□□□□□ -0.43
LIMK2-209ENST00000482270 USP17L4A6NCW7 530 aa12.36□□□□□ -0.43
LIMK2-209ENST00000482270 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms