RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 JMYQ8N9B5 988 aa13.37□□□□□ -0.27
CPSF4-212ENST00000482251 EYA3Q99504 573 aa13.37□□□□□ -0.27
CPSF4-212ENST00000482251 CACNA1FO60840 1977 aa13.37□□□□□ -0.27
CPSF4-212ENST00000482251 SCN9AQ15858 1988 aa13.36□□□□□ -0.27
CPSF4-212ENST00000482251 RTL9Q8NET4 1388 aa13.36□□□□□ -0.27
CPSF4-212ENST00000482251 TRAF5O00463 557 aa13.36□□□□□ -0.27
CPSF4-212ENST00000482251 PSMD14O00487 310 aa13.36□□□□□ -0.27
CPSF4-212ENST00000482251 TNIP1Q15025 636 aa13.36□□□□□ -0.27
CPSF4-212ENST00000482251 FAM161AQ3B820 660 aa13.36□□□□□ -0.27
CPSF4-212ENST00000482251 TTLL11Q8NHH1 800 aa13.36□□□□□ -0.27
CPSF4-212ENST00000482251 TRPM4Q8TD43 1214 aa13.36□□□□□ -0.27
CPSF4-212ENST00000482251 CDC5LQ99459 802 aaKnown RBP13.36□□□□□ -0.27
CPSF4-212ENST00000482251 KCNQ5Q9NR82 932 aa13.36□□□□□ -0.27
CPSF4-212ENST00000482251 ADARB2Q9NS39 739 aaKnown RBP13.36□□□□□ -0.27
CPSF4-212ENST00000482251 GGA1Q9UJY5 639 aa13.36□□□□□ -0.27
CPSF4-212ENST00000482251 ZNF521Q96K83 1311 aa13.36□□□□□ -0.27
CPSF4-212ENST00000482251 CNTNAP1P78357 1384 aa13.35□□□□□ -0.27
CPSF4-212ENST00000482251 WTIPA6NIX2 430 aaPredicted RBP13.35□□□□□ -0.27
CPSF4-212ENST00000482251 TMEM88BA6NKF7 163 aa13.35□□□□□ -0.27
CPSF4-212ENST00000482251 H7C1W4 665 aa13.35□□□□□ -0.27
CPSF4-212ENST00000482251 USP50Q70EL3 339 aaPredicted RBP13.35□□□□□ -0.27
CPSF4-212ENST00000482251 MICALL2Q8IY33 904 aa13.35□□□□□ -0.27
CPSF4-212ENST00000482251 LINS1Q8NG48 757 aa13.35□□□□□ -0.27
CPSF4-212ENST00000482251 XDHP47989 1333 aa13.35□□□□□ -0.27
CPSF4-212ENST00000482251 G3V3G9 751 aa13.34□□□□□ -0.27
CPSF4-212ENST00000482251 HSPA1AP0DMV8 641 aaKnown RBP13.34□□□□□ -0.27
CPSF4-212ENST00000482251 HSPA1BP0DMV9 641 aaKnown RBP13.34□□□□□ -0.27
CPSF4-212ENST00000482251 CASP7P55210 303 aa13.34□□□□□ -0.27
CPSF4-212ENST00000482251 DCAF8Q5TAQ9 597 aa13.34□□□□□ -0.27
CPSF4-212ENST00000482251 ZC3H12CQ9C0D7 883 aaKnown RBP13.34□□□□□ -0.27
CPSF4-212ENST00000482251 PODXL2Q9NZ53 605 aa13.34□□□□□ -0.27
CPSF4-212ENST00000482251 ABT1Q9ULW3 272 aaKnown RBP13.34□□□□□ -0.27
CPSF4-212ENST00000482251 ITGA6P23229 1130 aa13.33□□□□□ -0.28
CPSF4-212ENST00000482251 SLC4A10Q6U841 1118 aa13.33□□□□□ -0.28
CPSF4-212ENST00000482251 GLIS2Q9BZE0 524 aaPredicted RBP13.33□□□□□ -0.28
CPSF4-212ENST00000482251 CNOT7Q9UIV1 285 aaKnown RBP13.33□□□□□ -0.28
CPSF4-212ENST00000482251 CHMP3Q9Y3E7 222 aa13.33□□□□□ -0.28
CPSF4-212ENST00000482251 TRPM7Q96QT4 1865 aa13.32□□□□□ -0.28
CPSF4-212ENST00000482251 EGFRP00533 1210 aa13.32□□□□□ -0.28
CPSF4-212ENST00000482251 IGHMBP2P38935 993 aaKnown RBP13.32□□□□□ -0.28
CPSF4-212ENST00000482251 HIRAP54198 1017 aaPredicted RBP13.32□□□□□ -0.28
CPSF4-212ENST00000482251 TBC1D10BQ4KMP7 808 aaPredicted RBP13.32□□□□□ -0.28
CPSF4-212ENST00000482251 BEND3Q5T5X7 828 aa13.32□□□□□ -0.28
CPSF4-212ENST00000482251 SAMD7Q7Z3H4 446 aa13.32□□□□□ -0.28
CPSF4-212ENST00000482251 A0A1B0GUL6 1792 aa13.31□□□□□ -0.28
CPSF4-212ENST00000482251 H7C1D1 291 aa13.31□□□□□ -0.28
CPSF4-212ENST00000482251 ATP2B4P23634 1241 aa13.31□□□□□ -0.28
CPSF4-212ENST00000482251 VEGFBP49765 207 aa13.31□□□□□ -0.28
CPSF4-212ENST00000482251 GRM1Q13255 1194 aa13.31□□□□□ -0.28
CPSF4-212ENST00000482251 RBM26Q5T8P6 1007 aaKnown RBP13.31□□□□□ -0.28
CPSF4-212ENST00000482251 PAXIP1Q6ZW49 1069 aaPredicted RBP13.31□□□□□ -0.28
CPSF4-212ENST00000482251 PLA2G12BQ9BX93 195 aa13.31□□□□□ -0.28
CPSF4-212ENST00000482251 ZNF408Q9H9D4 720 aa13.31□□□□□ -0.28
CPSF4-212ENST00000482251 BSDC1Q9NW68 430 aaPredicted RBP13.31□□□□□ -0.28
CPSF4-212ENST00000482251 MINPP1Q9UNW1 487 aa13.31□□□□□ -0.28
CPSF4-212ENST00000482251 PSME4Q14997 1843 aa13.31□□□□□ -0.28
CPSF4-212ENST00000482251 KLRK1P26718 216 aa13.3□□□□□ -0.28
CPSF4-212ENST00000482251 DLK2Q6UY11 383 aa13.3□□□□□ -0.28
CPSF4-212ENST00000482251 FBXW7Q969H0 707 aa13.3□□□□□ -0.28
CPSF4-212ENST00000482251 CDCA7LQ96GN5 454 aa13.3□□□□□ -0.28
CPSF4-212ENST00000482251 MPHOSPH8Q99549 860 aa13.3□□□□□ -0.28
CPSF4-212ENST00000482251 MED23Q9ULK4 1368 aa13.3□□□□□ -0.28
CPSF4-212ENST00000482251 E9PSI1 815 aa13.29□□□□□ -0.28
CPSF4-212ENST00000482251 CELF2O95319 508 aaKnown RBP13.29□□□□□ -0.28
CPSF4-212ENST00000482251 CCT4P50991 539 aaKnown RBP13.29□□□□□ -0.28
CPSF4-212ENST00000482251 EPHA10Q5JZY3 1008 aa13.29□□□□□ -0.28
CPSF4-212ENST00000482251 ZNF646O15015 1829 aaPredicted RBP13.28□□□□□ -0.28
CPSF4-212ENST00000482251 ANKRD18BA2A2Z9 1011 aa13.28□□□□□ -0.28
CPSF4-212ENST00000482251 RASSF10A6NK89 507 aa13.28□□□□□ -0.28
CPSF4-212ENST00000482251 GRM8O00222 908 aa13.28□□□□□ -0.28
CPSF4-212ENST00000482251 CSF1RP07333 972 aa13.28□□□□□ -0.28
CPSF4-212ENST00000482251 RPS12P25398 132 aaKnown RBP13.28□□□□□ -0.28
CPSF4-212ENST00000482251 FOXO4P98177 505 aa13.28□□□□□ -0.28
CPSF4-212ENST00000482251 KIF4BQ2VIQ3 1234 aa13.28□□□□□ -0.28
CPSF4-212ENST00000482251 COL13A1Q5TAT6 717 aaPredicted RBP13.28□□□□□ -0.28
CPSF4-212ENST00000482251 CST9Q5W186 159 aa13.28□□□□□ -0.28
CPSF4-212ENST00000482251 TXNRD3Q86VQ6 643 aa13.28□□□□□ -0.28
CPSF4-212ENST00000482251 DPF2Q92785 391 aa13.28□□□□□ -0.28
CPSF4-212ENST00000482251 MXD3Q9BW11 206 aa13.28□□□□□ -0.28
CPSF4-212ENST00000482251 C9orf78Q9NZ63 289 aaPredicted RBP13.28□□□□□ -0.28
CPSF4-212ENST00000482251 ASTN2O75129 1339 aaPredicted RBP13.28□□□□□ -0.28
CPSF4-212ENST00000482251 ADM5C9JUS6 153 aa13.27□□□□□ -0.29
CPSF4-212ENST00000482251 SNAP23O00161 211 aa13.27□□□□□ -0.29
CPSF4-212ENST00000482251 VIL1P09327 827 aaKnown RBP13.27□□□□□ -0.29
CPSF4-212ENST00000482251 KCNJ4P48050 445 aa13.27□□□□□ -0.29
CPSF4-212ENST00000482251 CHRNDQ07001 517 aa13.27□□□□□ -0.29
CPSF4-212ENST00000482251 SLFN5Q08AF3 891 aa13.27□□□□□ -0.29
CPSF4-212ENST00000482251 IFIT5Q13325 482 aaKnown RBP13.27□□□□□ -0.29
CPSF4-212ENST00000482251 DEFB115Q30KQ5 88 aa13.27□□□□□ -0.29
CPSF4-212ENST00000482251 RSBN1LQ6PCB5 846 aaPredicted RBP13.27□□□□□ -0.29
CPSF4-212ENST00000482251 LMBR1LQ6UX01 489 aa13.27□□□□□ -0.29
CPSF4-212ENST00000482251 USP48Q86UV5 1035 aa13.27□□□□□ -0.29
CPSF4-212ENST00000482251 MRPL50Q8N5N7 158 aaKnown RBP13.27□□□□□ -0.29
CPSF4-212ENST00000482251 HELBQ8NG08 1087 aaPredicted RBP13.27□□□□□ -0.29
CPSF4-212ENST00000482251 ZNF594Q96JF6 807 aaPredicted RBP13.27□□□□□ -0.29
CPSF4-212ENST00000482251 SRCIN1Q9C0H9 1055 aa13.27□□□□□ -0.29
CPSF4-212ENST00000482251 GGA3Q9NZ52 723 aa13.27□□□□□ -0.29
CPSF4-212ENST00000482251 ZNF804BA4D1E1 1349 aa13.26□□□□□ -0.29
CPSF4-212ENST00000482251 USP17L3A6NCW0 530 aa13.26□□□□□ -0.29
CPSF4-212ENST00000482251 USP17L4A6NCW7 530 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms