RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 PA2G4Q9UQ80 394 aaKnown RBP14.37□□□□□ -0.11
HPS4-212ENST00000481910 COL11A2P13942 1736 aaPredicted RBP14.36□□□□□ -0.11
HPS4-212ENST00000481910 CNKSR1Q969H4 720 aa14.36□□□□□ -0.11
HPS4-212ENST00000481910 SIL1Q9H173 461 aa14.36□□□□□ -0.11
HPS4-212ENST00000481910 SURF6O75683 361 aaKnown RBP14.35□□□□□ -0.11
HPS4-212ENST00000481910 KCNA3P22001 575 aa14.35□□□□□ -0.11
HPS4-212ENST00000481910 HDAC1Q13547 482 aaPredicted RBP14.35□□□□□ -0.11
HPS4-212ENST00000481910 LDHAL6AQ6ZMR3 332 aa14.35□□□□□ -0.11
HPS4-212ENST00000481910 SYT17Q9BSW7 474 aa14.35□□□□□ -0.11
HPS4-212ENST00000481910 COPRSQ9NQ92 184 aa14.35□□□□□ -0.11
HPS4-212ENST00000481910 BBOX1O75936 387 aa14.35□□□□□ -0.11
HPS4-212ENST00000481910 IGHDP01880 384 aa14.35□□□□□ -0.11
HPS4-212ENST00000481910 NLGN2Q8NFZ4 835 aa14.35□□□□□ -0.11
HPS4-212ENST00000481910 CNNM1Q9NRU3 951 aa14.35□□□□□ -0.11
HPS4-212ENST00000481910 PIM2Q9P1W9 311 aa14.35□□□□□ -0.11
HPS4-212ENST00000481910 TTLL6Q8N841 843 aa14.34□□□□□ -0.11
HPS4-212ENST00000481910 PUS3Q9BZE2 481 aaKnown RBP14.34□□□□□ -0.11
HPS4-212ENST00000481910 BSDC1Q9NW68 430 aaPredicted RBP14.34□□□□□ -0.11
HPS4-212ENST00000481910 PPP4R2Q9NY27 417 aa14.34□□□□□ -0.11
HPS4-212ENST00000481910 EYA2O00167 538 aa14.33□□□□□ -0.11
HPS4-212ENST00000481910 G3BP1Q13283 466 aaKnown RBP eCLIP14.33□□□□□ -0.11
HPS4-212ENST00000481910 DHX37Q8IY37 1157 aaKnown RBP14.33□□□□□ -0.11
HPS4-212ENST00000481910 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.33□□□□□ -0.11
HPS4-212ENST00000481910 WWC3Q9ULE0 1092 aa14.33□□□□□ -0.11
HPS4-212ENST00000481910 EXOC6BQ9Y2D4 811 aa14.33□□□□□ -0.11
HPS4-212ENST00000481910 DLEC1Q9Y238 1755 aa14.33□□□□□ -0.12
HPS4-212ENST00000481910 COL4A1P02462 1669 aa14.33□□□□□ -0.12
HPS4-212ENST00000481910 CACNA1SQ13698 1873 aa14.33□□□□□ -0.12
HPS4-212ENST00000481910 A0A0U1RQG5 324 aaPredicted RBP14.33□□□□□ -0.12
HPS4-212ENST00000481910 PPEF1O14829 653 aaPredicted RBP14.33□□□□□ -0.12
HPS4-212ENST00000481910 OS9Q13438 667 aaPredicted RBP14.33□□□□□ -0.12
HPS4-212ENST00000481910 LRRC24Q50LG9 513 aa14.33□□□□□ -0.12
HPS4-212ENST00000481910 PRPF40BQ6NWY9 871 aaKnown RBP14.33□□□□□ -0.12
HPS4-212ENST00000481910 NOP58Q9Y2X3 529 aaKnown RBP14.33□□□□□ -0.12
HPS4-212ENST00000481910 SPEF2Q9C093 1822 aa14.33□□□□□ -0.12
HPS4-212ENST00000481910 KIAA1551Q9HCM1 1747 aa14.32□□□□□ -0.12
HPS4-212ENST00000481910 HSP90AB4PQ58FF6 505 aa14.32□□□□□ -0.12
HPS4-212ENST00000481910 DCTPP1Q9H773 170 aa14.32□□□□□ -0.12
HPS4-212ENST00000481910 LRP5O75197 1615 aa14.32□□□□□ -0.12
HPS4-212ENST00000481910 APBB1O00213 710 aa14.31□□□□□ -0.12
HPS4-212ENST00000481910 CIAO1O76071 339 aa14.31□□□□□ -0.12
HPS4-212ENST00000481910 ATG9AQ7Z3C6 839 aa14.31□□□□□ -0.12
HPS4-212ENST00000481910 TMC4Q7Z404 712 aa14.31□□□□□ -0.12
HPS4-212ENST00000481910 NAP1L5Q96NT1 182 aaPredicted RBP14.31□□□□□ -0.12
HPS4-212ENST00000481910 TMX4Q9H1E5 349 aaPredicted RBP14.31□□□□□ -0.12
HPS4-212ENST00000481910 ZNF219Q9P2Y4 722 aaPredicted RBP14.31□□□□□ -0.12
HPS4-212ENST00000481910 RIPOR2Q9Y4F9 1068 aa14.31□□□□□ -0.12
HPS4-212ENST00000481910 SLX4Q8IY92 1834 aa14.31□□□□□ -0.12
HPS4-212ENST00000481910 IL15P40933 162 aaPredicted RBP14.31□□□□□ -0.12
HPS4-212ENST00000481910 DALRD3Q5D0E6 543 aaKnown RBP14.31□□□□□ -0.12
HPS4-212ENST00000481910 B4GALNT3Q6L9W6 998 aa14.31□□□□□ -0.12
HPS4-212ENST00000481910 PAXIP1Q6ZW49 1069 aaPredicted RBP14.31□□□□□ -0.12
HPS4-212ENST00000481910 SP8Q8IXZ3 490 aa14.31□□□□□ -0.12
HPS4-212ENST00000481910 MINPP1Q9UNW1 487 aa14.31□□□□□ -0.12
HPS4-212ENST00000481910 GCC1Q96CN9 775 aa14.3□□□□□ -0.12
HPS4-212ENST00000481910 ATP6V0A2Q9Y487 856 aa14.3□□□□□ -0.12
HPS4-212ENST00000481910 MROH5Q6ZUA9 1318 aa14.3□□□□□ -0.12
HPS4-212ENST00000481910 CHRNDQ07001 517 aa14.29□□□□□ -0.12
HPS4-212ENST00000481910 METTL24Q5JXM2 366 aa14.29□□□□□ -0.12
HPS4-212ENST00000481910 ERC1Q8IUD2 1116 aa14.29□□□□□ -0.12
HPS4-212ENST00000481910 HELBQ8NG08 1087 aaPredicted RBP14.29□□□□□ -0.12
HPS4-212ENST00000481910 BCS1LQ9Y276 419 aa14.29□□□□□ -0.12
HPS4-212ENST00000481910 BRCA1P38398 1863 aaKnown RBP14.29□□□□□ -0.12
HPS4-212ENST00000481910 C21orf2O43822 256 aa14.29□□□□□ -0.12
HPS4-212ENST00000481910 RAB11FIP3O75154 756 aa14.29□□□□□ -0.12
HPS4-212ENST00000481910 OLFM4Q6UX06 510 aa14.29□□□□□ -0.12
HPS4-212ENST00000481910 ANKIB1Q9P2G1 1089 aa14.29□□□□□ -0.12
HPS4-212ENST00000481910 CEP126Q9P2H0 1117 aa14.29□□□□□ -0.12
HPS4-212ENST00000481910 NSFL1CQ9UNZ2 370 aaKnown RBP14.29□□□□□ -0.12
HPS4-212ENST00000481910 TAF5LO75529 589 aa14.28□□□□□ -0.12
HPS4-212ENST00000481910 SASH1O94885 1247 aa14.28□□□□□ -0.12
HPS4-212ENST00000481910 TFCP2Q12800 502 aa14.28□□□□□ -0.12
HPS4-212ENST00000481910 SLC51AQ86UW1 340 aa14.28□□□□□ -0.12
HPS4-212ENST00000481910 SMC5Q8IY18 1101 aa14.28□□□□□ -0.12
HPS4-212ENST00000481910 RHPN1Q8TCX5 695 aa14.28□□□□□ -0.12
HPS4-212ENST00000481910 C7orf43Q8WVR3 580 aa14.28□□□□□ -0.12
HPS4-212ENST00000481910 ANKRD2Q9GZV1 360 aa14.28□□□□□ -0.12
HPS4-212ENST00000481910 KIF1BPQ96EK5 621 aa14.27□□□□□ -0.12
HPS4-212ENST00000481910 LRRCC1Q9C099 1032 aa14.27□□□□□ -0.12
HPS4-212ENST00000481910 PDE8BO95263 885 aa14.27□□□□□ -0.13
HPS4-212ENST00000481910 ANKRD45Q5TZF3 282 aa14.27□□□□□ -0.13
HPS4-212ENST00000481910 CC2D2BQ6DHV5 1058 aa14.27□□□□□ -0.13
HPS4-212ENST00000481910 ZBTB47Q9UFB7 747 aaPredicted RBP14.27□□□□□ -0.13
HPS4-212ENST00000481910 GPSM2P81274 684 aa14.26□□□□□ -0.13
HPS4-212ENST00000481910 CENPQQ7L2Z9 268 aaPredicted RBP14.26□□□□□ -0.13
HPS4-212ENST00000481910 MPNDQ8N594 471 aa14.26□□□□□ -0.13
HPS4-212ENST00000481910 VGLL2Q8N8G2 317 aa14.26□□□□□ -0.13
HPS4-212ENST00000481910 IL1RAPL2Q9NP60 686 aa14.26□□□□□ -0.13
HPS4-212ENST00000481910 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.26□□□□□ -0.13
HPS4-212ENST00000481910 XDHP47989 1333 aa14.26□□□□□ -0.13
HPS4-212ENST00000481910 SOGA3Q5TF21 947 aa14.25□□□□□ -0.13
HPS4-212ENST00000481910 BBXQ8WY36 941 aaPredicted RBP14.25□□□□□ -0.13
HPS4-212ENST00000481910 KDM2BQ8NHM5 1336 aa14.25□□□□□ -0.13
HPS4-212ENST00000481910 SMARCA5O60264 1052 aaPredicted RBP14.25□□□□□ -0.13
HPS4-212ENST00000481910 KCNJ4P48050 445 aa14.25□□□□□ -0.13
HPS4-212ENST00000481910 CCDC93Q567U6 631 aa14.25□□□□□ -0.13
HPS4-212ENST00000481910 DPP8Q6V1X1 898 aaPredicted RBP14.25□□□□□ -0.13
HPS4-212ENST00000481910 AKAP2Q9Y2D5 859 aa14.25□□□□□ -0.13
HPS4-212ENST00000481910 LRRC37AA6NMS7 1700 aa14.25□□□□□ -0.13
HPS4-212ENST00000481910 SNAP23O00161 211 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms