RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 LOC102724428A0A0B4J2F2 783 aa4.61□□□□□ -1.67
USH2A-204ENST00000481786 WDR64B1ANS9 1081 aa4.61□□□□□ -1.67
USH2A-204ENST00000481786 LINC01387J3KSC0 135 aa4.61□□□□□ -1.67
USH2A-204ENST00000481786 DKK1O94907 266 aa4.61□□□□□ -1.67
USH2A-204ENST00000481786 RASA1P20936 1047 aa4.61□□□□□ -1.67
USH2A-204ENST00000481786 SIK1P57059 783 aa4.61□□□□□ -1.67
USH2A-204ENST00000481786 FBLN7Q53RD9 439 aa4.61□□□□□ -1.67
USH2A-204ENST00000481786 KIAA1211Q6ZU35 1233 aa4.61□□□□□ -1.67
USH2A-204ENST00000481786 DDX3YO15523 660 aaKnown RBP4.6□□□□□ -1.67
USH2A-204ENST00000481786 LZTS3O60299 673 aaPredicted RBP4.6□□□□□ -1.67
USH2A-204ENST00000481786 CDC25BP30305 580 aa4.6□□□□□ -1.67
USH2A-204ENST00000481786 NRLP54845 237 aa4.6□□□□□ -1.67
USH2A-204ENST00000481786 FAM20CQ8IXL6 584 aa4.6□□□□□ -1.67
USH2A-204ENST00000481786 GLMNQ92990 594 aa4.6□□□□□ -1.67
USH2A-204ENST00000481786 ZNF594Q96JF6 807 aaPredicted RBP4.6□□□□□ -1.67
USH2A-204ENST00000481786 MYRFLQ96LU7 910 aa4.6□□□□□ -1.67
USH2A-204ENST00000481786 MFSD14AQ96MC6 490 aa4.6□□□□□ -1.67
USH2A-204ENST00000481786 TLR7Q9NYK1 1049 aaKnown RBP4.6□□□□□ -1.67
USH2A-204ENST00000481786 CECR2Q9BXF3 1484 aa4.6□□□□□ -1.67
USH2A-204ENST00000481786 RTN1Q16799 776 aa4.59□□□□□ -1.67
USH2A-204ENST00000481786 OGFOD1Q8N543 542 aa4.59□□□□□ -1.67
USH2A-204ENST00000481786 FAM83CQ9BQN1 747 aa4.59□□□□□ -1.67
USH2A-204ENST00000481786 CARD10Q9BWT7 1032 aa4.59□□□□□ -1.67
USH2A-204ENST00000481786 KCNF1Q9H3M0 494 aa4.59□□□□□ -1.67
USH2A-204ENST00000481786 CCDC39Q9UFE4 941 aa4.59□□□□□ -1.67
USH2A-204ENST00000481786 GTF3C3Q9Y5Q9 886 aa4.59□□□□□ -1.67
USH2A-204ENST00000481786 OPLAHO14841 1288 aa4.58□□□□□ -1.68
USH2A-204ENST00000481786 ATP9BO43861 1147 aa4.58□□□□□ -1.68
USH2A-204ENST00000481786 MMP20O60882 483 aa4.58□□□□□ -1.68
USH2A-204ENST00000481786 BMP3P12645 472 aa4.58□□□□□ -1.68
USH2A-204ENST00000481786 ITGB5P18084 799 aa4.58□□□□□ -1.68
USH2A-204ENST00000481786 CD68P34810 354 aaPredicted RBP4.58□□□□□ -1.68
USH2A-204ENST00000481786 DGKZQ13574 1117 aa4.58□□□□□ -1.68
USH2A-204ENST00000481786 HIF1AQ16665 826 aa4.58□□□□□ -1.68
USH2A-204ENST00000481786 MSMPQ1L6U9 139 aa4.58□□□□□ -1.68
USH2A-204ENST00000481786 LCE5AQ5TCM9 118 aa4.58□□□□□ -1.68
USH2A-204ENST00000481786 BEND4Q6ZU67 534 aa4.58□□□□□ -1.68
USH2A-204ENST00000481786 TRIM50Q86XT4 487 aa4.58□□□□□ -1.68
USH2A-204ENST00000481786 CLEC10AQ8IUN9 316 aa4.58□□□□□ -1.68
USH2A-204ENST00000481786 PLEKHM2Q8IWE5 1019 aa4.58□□□□□ -1.68
USH2A-204ENST00000481786 STAG2Q8N3U4 1231 aa4.58□□□□□ -1.68
USH2A-204ENST00000481786 UBASH3BQ8TF42 649 aa4.58□□□□□ -1.68
USH2A-204ENST00000481786 ASIC4Q96FT7 647 aa4.58□□□□□ -1.68
USH2A-204ENST00000481786 CEP41Q9BYV8 373 aa4.58□□□□□ -1.68
USH2A-204ENST00000481786 PPME1Q9Y570 386 aa4.58□□□□□ -1.68
USH2A-204ENST00000481786 USP17L3A6NCW0 530 aa4.57□□□□□ -1.68
USH2A-204ENST00000481786 USP17L4A6NCW7 530 aa4.57□□□□□ -1.68
USH2A-204ENST00000481786 M0R2N6 131 aa4.57□□□□□ -1.68
USH2A-204ENST00000481786 ADAM11O75078 769 aa4.57□□□□□ -1.68
USH2A-204ENST00000481786 GHRHP01286 108 aa4.57□□□□□ -1.68
USH2A-204ENST00000481786 EPB42P16452 691 aa4.57□□□□□ -1.68
USH2A-204ENST00000481786 PREPP48147 710 aa4.57□□□□□ -1.68
USH2A-204ENST00000481786 ARSDP51689 593 aa4.57□□□□□ -1.68
USH2A-204ENST00000481786 USP17L2Q6R6M4 530 aa4.57□□□□□ -1.68
USH2A-204ENST00000481786 USP17L1Q7RTZ2 530 aa4.57□□□□□ -1.68
USH2A-204ENST00000481786 FOXD4L4Q8WXT5 416 aaPredicted RBP4.57□□□□□ -1.68
USH2A-204ENST00000481786 CALR3Q96L12 384 aaKnown RBP4.57□□□□□ -1.68
USH2A-204ENST00000481786 LACRTQ9GZZ8 138 aa4.57□□□□□ -1.68
USH2A-204ENST00000481786 PIM2Q9P1W9 311 aa4.57□□□□□ -1.68
USH2A-204ENST00000481786 TFIP11Q9UBB9 837 aaKnown RBP4.57□□□□□ -1.68
USH2A-204ENST00000481786 ZNF777Q9ULD5 760 aaPredicted RBP4.57□□□□□ -1.68
USH2A-204ENST00000481786 PALM3A6NDB9 673 aaPredicted RBP4.56□□□□□ -1.68
USH2A-204ENST00000481786 MICAL2O94851 1124 aa4.56□□□□□ -1.68
USH2A-204ENST00000481786 F13BP05160 661 aa4.56□□□□□ -1.68
USH2A-204ENST00000481786 UVSSAQ2YD98 709 aa4.56□□□□□ -1.68
USH2A-204ENST00000481786 COL13A1Q5TAT6 717 aaPredicted RBP4.56□□□□□ -1.68
USH2A-204ENST00000481786 MAP4K3Q8IVH8 894 aa4.56□□□□□ -1.68
USH2A-204ENST00000481786 ZMYND15Q9H091 742 aa4.56□□□□□ -1.68
USH2A-204ENST00000481786 SRA1Q9HD15 236 aaKnown RBP4.56□□□□□ -1.68
USH2A-204ENST00000481786 ANGEL1Q9UNK9 670 aaKnown RBP4.56□□□□□ -1.68
USH2A-204ENST00000481786 RTCBQ9Y3I0 505 aaKnown RBP4.56□□□□□ -1.68
USH2A-204ENST00000481786 XYLBO75191 536 aa4.55□□□□□ -1.68
USH2A-204ENST00000481786 ZNF865P0CJ78 1059 aaPredicted RBP4.55□□□□□ -1.68
USH2A-204ENST00000481786 ATP1A2P50993 1020 aa4.55□□□□□ -1.68
USH2A-204ENST00000481786 ATP11AP98196 1134 aa4.55□□□□□ -1.68
USH2A-204ENST00000481786 DUOXA2Q1HG44 320 aa4.55□□□□□ -1.68
USH2A-204ENST00000481786 TP53INP2Q8IXH6 220 aa4.55□□□□□ -1.68
USH2A-204ENST00000481786 LARGE2Q8N3Y3 721 aa4.55□□□□□ -1.68
USH2A-204ENST00000481786 FBXL6Q8N531 539 aa4.55□□□□□ -1.68
USH2A-204ENST00000481786 PPP1R12CQ9BZL4 782 aa4.55□□□□□ -1.68
USH2A-204ENST00000481786 MKRN1Q9UHC7 482 aaKnown RBP4.55□□□□□ -1.68
USH2A-204ENST00000481786 MAFBQ9Y5Q3 323 aaPredicted RBP4.55□□□□□ -1.68
USH2A-204ENST00000481786 PAPLNO95428 1278 aa4.54□□□□□ -1.68
USH2A-204ENST00000481786 PSAPP07602 524 aa4.54□□□□□ -1.68
USH2A-204ENST00000481786 SGO2Q562F6 1265 aa4.54□□□□□ -1.68
USH2A-204ENST00000481786 KRTAP5-3Q6L8H2 238 aa4.54□□□□□ -1.68
USH2A-204ENST00000481786 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.54□□□□□ -1.68
USH2A-204ENST00000481786 SIX5Q8N196 739 aa4.54□□□□□ -1.68
USH2A-204ENST00000481786 CMTR1Q8N1G2 835 aaKnown RBP4.54□□□□□ -1.68
USH2A-204ENST00000481786 KLHDC7BQ96G42 594 aa4.54□□□□□ -1.68
USH2A-204ENST00000481786 QTRT2Q9H974 415 aaKnown RBP4.54□□□□□ -1.68
USH2A-204ENST00000481786 SH2B1Q9NRF2 756 aaPredicted RBP4.54□□□□□ -1.68
USH2A-204ENST00000481786 KCNMB2Q9Y691 235 aa4.54□□□□□ -1.68
USH2A-204ENST00000481786 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.54□□□□□ -1.68
USH2A-204ENST00000481786 CUX2O14529 1486 aa4.54□□□□□ -1.68
USH2A-204ENST00000481786 NACADO15069 1562 aa4.53□□□□□ -1.68
USH2A-204ENST00000481786 DBX1A6NMT0 343 aa4.53□□□□□ -1.68
USH2A-204ENST00000481786 KANK4Q5T7N3 995 aaPredicted RBP4.53□□□□□ -1.68
USH2A-204ENST00000481786 RGL4Q8IZJ4 473 aa4.53□□□□□ -1.68
USH2A-204ENST00000481786 LEMD3Q9Y2U8 911 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms