RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 PCNTO95613 3336 aa14.47□□□□□ -0.09
RAPGEF1-207ENST00000481260 EIF6P56537 245 aaKnown RBP14.47□□□□□ -0.09
RAPGEF1-207ENST00000481260 ALDH1L2Q3SY69 923 aa14.47□□□□□ -0.09
RAPGEF1-207ENST00000481260 GRIPAP1Q4V328 841 aa14.47□□□□□ -0.09
RAPGEF1-207ENST00000481260 IFFO2Q5TF58 517 aa14.47□□□□□ -0.09
RAPGEF1-207ENST00000481260 LMBR1LQ6UX01 489 aa14.47□□□□□ -0.09
RAPGEF1-207ENST00000481260 GPC2Q8N158 579 aa14.47□□□□□ -0.09
RAPGEF1-207ENST00000481260 SUPT20HQ8NEM7 779 aa14.47□□□□□ -0.09
RAPGEF1-207ENST00000481260 ANKIB1Q9P2G1 1089 aa14.47□□□□□ -0.09
RAPGEF1-207ENST00000481260 ZNRF3Q9ULT6 936 aa14.47□□□□□ -0.09
RAPGEF1-207ENST00000481260 MYH3P11055 1940 aa14.47□□□□□ -0.09
RAPGEF1-207ENST00000481260 BCAR3O75815 825 aa14.46□□□□□ -0.09
RAPGEF1-207ENST00000481260 ALDH1L1O75891 902 aa14.46□□□□□ -0.09
RAPGEF1-207ENST00000481260 GMPSP49915 693 aaPredicted RBP14.46□□□□□ -0.09
RAPGEF1-207ENST00000481260 WASHC4Q2M389 1173 aa14.46□□□□□ -0.09
RAPGEF1-207ENST00000481260 TXNRD3Q86VQ6 643 aa14.46□□□□□ -0.09
RAPGEF1-207ENST00000481260 ANKRD44Q8N8A2 993 aa14.46□□□□□ -0.09
RAPGEF1-207ENST00000481260 PODXL2Q9NZ53 605 aa14.46□□□□□ -0.09
RAPGEF1-207ENST00000481260 C9orf78Q9NZ63 289 aaPredicted RBP14.46□□□□□ -0.09
RAPGEF1-207ENST00000481260 ZBTB12Q9Y330 459 aaPredicted RBP14.46□□□□□ -0.09
RAPGEF1-207ENST00000481260 CHMP3Q9Y3E7 222 aa14.46□□□□□ -0.09
RAPGEF1-207ENST00000481260 PTPRCP08575 1304 aa14.45□□□□□ -0.1
RAPGEF1-207ENST00000481260 HSP90B1P14625 803 aaKnown RBP14.45□□□□□ -0.1
RAPGEF1-207ENST00000481260 EPHX2P34913 555 aa14.45□□□□□ -0.1
RAPGEF1-207ENST00000481260 EAPPQ56P03 285 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF1-207ENST00000481260 HELBQ8NG08 1087 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF1-207ENST00000481260 CDC5LQ99459 802 aaKnown RBP14.45□□□□□ -0.1
RAPGEF1-207ENST00000481260 USP44Q9H0E7 712 aa14.45□□□□□ -0.1
RAPGEF1-207ENST00000481260 BSDC1Q9NW68 430 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF1-207ENST00000481260 HACL1Q9UJ83 578 aa14.45□□□□□ -0.1
RAPGEF1-207ENST00000481260 GGA1Q9UJY5 639 aa14.45□□□□□ -0.1
RAPGEF1-207ENST00000481260 UTYO14607 1347 aa14.44□□□□□ -0.1
RAPGEF1-207ENST00000481260 PSMD14O00487 310 aa14.44□□□□□ -0.1
RAPGEF1-207ENST00000481260 ECE2O60344 883 aa14.44□□□□□ -0.1
RAPGEF1-207ENST00000481260 FMR1Q06787 632 aaKnown RBP eCLIP14.44□□□□□ -0.1
RAPGEF1-207ENST00000481260 SMC1BQ8NDV3 1235 aa14.44□□□□□ -0.1
RAPGEF1-207ENST00000481260 BICC1Q9H694 974 aaKnown RBP14.44□□□□□ -0.1
RAPGEF1-207ENST00000481260 SCN9AQ15858 1988 aa14.43□□□□□ -0.1
RAPGEF1-207ENST00000481260 XDHP47989 1333 aa14.43□□□□□ -0.1
RAPGEF1-207ENST00000481260 TAF5LO75529 589 aa14.43□□□□□ -0.1
RAPGEF1-207ENST00000481260 FSTL1Q12841 308 aa14.43□□□□□ -0.1
RAPGEF1-207ENST00000481260 CIAPIN1Q6FI81 312 aa14.43□□□□□ -0.1
RAPGEF1-207ENST00000481260 MXD3Q9BW11 206 aa14.43□□□□□ -0.1
RAPGEF1-207ENST00000481260 PUS3Q9BZE2 481 aaKnown RBP14.43□□□□□ -0.1
RAPGEF1-207ENST00000481260 VPS33BQ9H267 617 aa14.43□□□□□ -0.1
RAPGEF1-207ENST00000481260 ADAMTSL1Q8N6G6 1762 aa14.42□□□□□ -0.1
RAPGEF1-207ENST00000481260 ANKRD18BA2A2Z9 1011 aa14.42□□□□□ -0.1
RAPGEF1-207ENST00000481260 EGFRP00533 1210 aa14.42□□□□□ -0.1
RAPGEF1-207ENST00000481260 IGHMBP2P38935 993 aaKnown RBP14.42□□□□□ -0.1
RAPGEF1-207ENST00000481260 CHRNDQ07001 517 aa14.42□□□□□ -0.1
RAPGEF1-207ENST00000481260 MAP1SQ66K74 1059 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF1-207ENST00000481260 CHADLQ6NUI6 762 aa14.42□□□□□ -0.1
RAPGEF1-207ENST00000481260 KLHDC4Q8TBB5 520 aa14.42□□□□□ -0.1
RAPGEF1-207ENST00000481260 TRPM4Q8TD43 1214 aa14.42□□□□□ -0.1
RAPGEF1-207ENST00000481260 GPRC5DQ9NZD1 345 aa14.42□□□□□ -0.1
RAPGEF1-207ENST00000481260 IQCA1LA6NCM1 817 aa14.41□□□□□ -0.1
RAPGEF1-207ENST00000481260 CT47B1P0C2W7 299 aaPredicted RBP14.41□□□□□ -0.1
RAPGEF1-207ENST00000481260 CCT4P50991 539 aaKnown RBP14.41□□□□□ -0.1
RAPGEF1-207ENST00000481260 HIRAP54198 1017 aaPredicted RBP14.41□□□□□ -0.1
RAPGEF1-207ENST00000481260 IFIT5Q13325 482 aaKnown RBP14.41□□□□□ -0.1
RAPGEF1-207ENST00000481260 DLK2Q6UY11 383 aa14.41□□□□□ -0.1
RAPGEF1-207ENST00000481260 ZC3H12CQ9C0D7 883 aaKnown RBP14.41□□□□□ -0.1
RAPGEF1-207ENST00000481260 SCN4AP35499 1836 aa14.41□□□□□ -0.1
RAPGEF1-207ENST00000481260 IRS2Q9Y4H2 1338 aa14.41□□□□□ -0.1
RAPGEF1-207ENST00000481260 ATP2B4P23634 1241 aa14.4□□□□□ -0.1
RAPGEF1-207ENST00000481260 BRPF1P55201 1214 aaPredicted RBP14.4□□□□□ -0.1
RAPGEF1-207ENST00000481260 LDHDQ86WU2 507 aa14.4□□□□□ -0.1
RAPGEF1-207ENST00000481260 DNAJC5GQ8N7S2 189 aa14.4□□□□□ -0.1
RAPGEF1-207ENST00000481260 EYA3Q99504 573 aa14.4□□□□□ -0.1
RAPGEF1-207ENST00000481260 MPHOSPH8Q99549 860 aa14.4□□□□□ -0.1
RAPGEF1-207ENST00000481260 CLEC11AQ9Y240 323 aa14.4□□□□□ -0.1
RAPGEF1-207ENST00000481260 ZBED9Q6R2W3 1325 aa14.4□□□□□ -0.1
RAPGEF1-207ENST00000481260 PLIN1O60240 522 aa14.39□□□□□ -0.11
RAPGEF1-207ENST00000481260 ITGBL1O95965 494 aaPredicted RBP14.39□□□□□ -0.11
RAPGEF1-207ENST00000481260 RABL6Q3YEC7 729 aaPredicted RBP14.39□□□□□ -0.11
RAPGEF1-207ENST00000481260 LRRC24Q50LG9 513 aa14.39□□□□□ -0.11
RAPGEF1-207ENST00000481260 SAMD7Q7Z3H4 446 aa14.39□□□□□ -0.11
RAPGEF1-207ENST00000481260 MEIS3Q99687 375 aa14.39□□□□□ -0.11
RAPGEF1-207ENST00000481260 ZNF804BA4D1E1 1349 aa14.39□□□□□ -0.11
RAPGEF1-207ENST00000481260 A0A1B0GUL6 1792 aa14.38□□□□□ -0.11
RAPGEF1-207ENST00000481260 TRAF5O00463 557 aa14.38□□□□□ -0.11
RAPGEF1-207ENST00000481260 TRIM27P14373 513 aa14.38□□□□□ -0.11
RAPGEF1-207ENST00000481260 LMOD1P29536 600 aaPredicted RBP14.38□□□□□ -0.11
RAPGEF1-207ENST00000481260 APLP1P51693 650 aa14.38□□□□□ -0.11
RAPGEF1-207ENST00000481260 CCDC57Q2TAC2 916 aa14.38□□□□□ -0.11
RAPGEF1-207ENST00000481260 MICALL2Q8IY33 904 aa14.38□□□□□ -0.11
RAPGEF1-207ENST00000481260 FRAT1Q92837 279 aaPredicted RBP14.38□□□□□ -0.11
RAPGEF1-207ENST00000481260 CLUAP1Q96AJ1 413 aa14.38□□□□□ -0.11
RAPGEF1-207ENST00000481260 CNOT7Q9UIV1 285 aaKnown RBP14.38□□□□□ -0.11
RAPGEF1-207ENST00000481260 ASTN2O75129 1339 aaPredicted RBP14.38□□□□□ -0.11
RAPGEF1-207ENST00000481260 PASKQ96RG2 1323 aa14.38□□□□□ -0.11
RAPGEF1-207ENST00000481260 MED23Q9ULK4 1368 aa14.37□□□□□ -0.11
RAPGEF1-207ENST00000481260 RFX5P48382 616 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF1-207ENST00000481260 TNIP1Q15025 636 aa14.37□□□□□ -0.11
RAPGEF1-207ENST00000481260 TBC1D10BQ4KMP7 808 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF1-207ENST00000481260 LDHAL6AQ6ZMR3 332 aa14.37□□□□□ -0.11
RAPGEF1-207ENST00000481260 API5Q9BZZ5 524 aaKnown RBP14.37□□□□□ -0.11
RAPGEF1-207ENST00000481260 VIL1P09327 827 aaKnown RBP14.36□□□□□ -0.11
RAPGEF1-207ENST00000481260 TAF7LQ5H9L4 462 aa14.36□□□□□ -0.11
RAPGEF1-207ENST00000481260 RBM26Q5T8P6 1007 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms