RNA–Protein interactions for RNA: ENST00000481114.1

SDCCAG3-210, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-210ENST00000481114 ISCA1Q9BUE6 129 aa17.52■□□□□ 0.4
SDCCAG3-210ENST00000481114 LAS1LQ9Y4W2 734 aaKnown RBP17.52■□□□□ 0.4
SDCCAG3-210ENST00000481114 G3V3G9 751 aa17.51■□□□□ 0.39
SDCCAG3-210ENST00000481114 RTL5Q5HYW3 569 aaPredicted RBP17.51■□□□□ 0.39
SDCCAG3-210ENST00000481114 DCAF8Q5TAQ9 597 aa17.51■□□□□ 0.39
SDCCAG3-210ENST00000481114 RNF186Q9NXI6 227 aa17.51■□□□□ 0.39
SDCCAG3-210ENST00000481114 RTL9Q8NET4 1388 aa17.51■□□□□ 0.39
SDCCAG3-210ENST00000481114 CHL1O00533 1208 aa17.5■□□□□ 0.39
SDCCAG3-210ENST00000481114 HDGFL1Q5TGJ6 251 aa17.5■□□□□ 0.39
SDCCAG3-210ENST00000481114 TBC1D16Q8TBP0 767 aa17.5■□□□□ 0.39
SDCCAG3-210ENST00000481114 ZC3H12CQ9C0D7 883 aaKnown RBP17.5■□□□□ 0.39
SDCCAG3-210ENST00000481114 GGA3Q9NZ52 723 aa17.5■□□□□ 0.39
SDCCAG3-210ENST00000481114 PCDH10Q9P2E7 1040 aa17.5■□□□□ 0.39
SDCCAG3-210ENST00000481114 SCN9AQ15858 1988 aa17.49■□□□□ 0.39
SDCCAG3-210ENST00000481114 IRS4O14654 1257 aaPredicted RBP17.49■□□□□ 0.39
SDCCAG3-210ENST00000481114 SLC10A3P09131 477 aa17.49■□□□□ 0.39
SDCCAG3-210ENST00000481114 SOX10P56693 466 aa17.49■□□□□ 0.39
SDCCAG3-210ENST00000481114 RPS8P62241 208 aaKnown RBP17.49■□□□□ 0.39
SDCCAG3-210ENST00000481114 DBF4Q9UBU7 674 aaPredicted RBP17.49■□□□□ 0.39
SDCCAG3-210ENST00000481114 COL4A1P02462 1669 aa17.48■□□□□ 0.39
SDCCAG3-210ENST00000481114 VIL1P09327 827 aaKnown RBP17.48■□□□□ 0.39
SDCCAG3-210ENST00000481114 CDCA5Q96FF9 252 aa17.48■□□□□ 0.39
SDCCAG3-210ENST00000481114 CSRNP1Q96S65 589 aa17.48■□□□□ 0.39
SDCCAG3-210ENST00000481114 UFL1O94874 794 aa17.47■□□□□ 0.39
SDCCAG3-210ENST00000481114 CCDC146Q8IYE0 955 aa17.47■□□□□ 0.39
SDCCAG3-210ENST00000481114 ANKIB1Q9P2G1 1089 aa17.47■□□□□ 0.39
SDCCAG3-210ENST00000481114 ASTN2O75129 1339 aaPredicted RBP17.47■□□□□ 0.39
SDCCAG3-210ENST00000481114 HOXB7P09629 217 aa17.46■□□□□ 0.39
SDCCAG3-210ENST00000481114 CTU1Q7Z7A3 348 aaKnown RBP17.46■□□□□ 0.39
SDCCAG3-210ENST00000481114 REM2Q8IYK8 340 aaPredicted RBP17.46■□□□□ 0.39
SDCCAG3-210ENST00000481114 HYPKQ9NX55 129 aa17.46■□□□□ 0.39
SDCCAG3-210ENST00000481114 GGA1Q9UJY5 639 aa17.46■□□□□ 0.39
SDCCAG3-210ENST00000481114 TRIM28Q13263 835 aaKnown RBP17.45■□□□□ 0.38
SDCCAG3-210ENST00000481114 SCARF1Q14162 830 aa17.45■□□□□ 0.38
SDCCAG3-210ENST00000481114 ANGEL2Q5VTE6 544 aaKnown RBP17.45■□□□□ 0.38
SDCCAG3-210ENST00000481114 SEC31BQ9NQW1 1179 aa17.45■□□□□ 0.38
SDCCAG3-210ENST00000481114 PODXL2Q9NZ53 605 aa17.45■□□□□ 0.38
SDCCAG3-210ENST00000481114 HSP90B1P14625 803 aaKnown RBP17.44■□□□□ 0.38
SDCCAG3-210ENST00000481114 ZNF280AP59817 542 aaPredicted RBP17.44■□□□□ 0.38
SDCCAG3-210ENST00000481114 RALBP1Q15311 655 aa17.44■□□□□ 0.38
SDCCAG3-210ENST00000481114 RSBN1LQ6PCB5 846 aaPredicted RBP17.44■□□□□ 0.38
SDCCAG3-210ENST00000481114 RIC3Q7Z5B4 369 aa17.44■□□□□ 0.38
SDCCAG3-210ENST00000481114 RASAL3Q86YV0 1011 aa17.44■□□□□ 0.38
SDCCAG3-210ENST00000481114 AGBL3Q8NEM8 1001 aa17.44■□□□□ 0.38
SDCCAG3-210ENST00000481114 TNRC18O15417 2968 aaPredicted RBP17.43■□□□□ 0.38
SDCCAG3-210ENST00000481114 DUSP27Q5VZP5 1158 aa17.43■□□□□ 0.38
SDCCAG3-210ENST00000481114 ZBTB38Q8NAP3 1195 aaPredicted RBP17.43■□□□□ 0.38
SDCCAG3-210ENST00000481114 TRIM35Q9UPQ4 493 aa17.43■□□□□ 0.38
SDCCAG3-210ENST00000481114 PSME4Q14997 1843 aa17.42■□□□□ 0.38
SDCCAG3-210ENST00000481114 FKBP1BP68106 108 aa17.42■□□□□ 0.38
SDCCAG3-210ENST00000481114 GOLGA2Q08379 1002 aa17.42■□□□□ 0.38
SDCCAG3-210ENST00000481114 RUNDC1Q96C34 613 aa17.42■□□□□ 0.38
SDCCAG3-210ENST00000481114 PAPPA2Q9BXP8 1791 aa17.41■□□□□ 0.38
SDCCAG3-210ENST00000481114 USP17L8P0C7I0 530 aa17.41■□□□□ 0.38
SDCCAG3-210ENST00000481114 CCDC152Q4G0S7 254 aa17.41■□□□□ 0.38
SDCCAG3-210ENST00000481114 CCDC85AQ96PX6 553 aaPredicted RBP17.4■□□□□ 0.38
SDCCAG3-210ENST00000481114 MYD88Q99836 296 aa17.4■□□□□ 0.38
SDCCAG3-210ENST00000481114 MYOZ2Q9NPC6 264 aa17.4■□□□□ 0.38
SDCCAG3-210ENST00000481114 HDAC9Q9UKV0 1011 aa17.4■□□□□ 0.38
SDCCAG3-210ENST00000481114 PITPNM2Q9BZ72 1349 aa17.4■□□□□ 0.38
SDCCAG3-210ENST00000481114 ZNF609O15014 1411 aa17.39■□□□□ 0.38
SDCCAG3-210ENST00000481114 PDE8AO60658 829 aa17.39■□□□□ 0.37
SDCCAG3-210ENST00000481114 WDR43Q15061 677 aaKnown RBP eCLIP17.39■□□□□ 0.37
SDCCAG3-210ENST00000481114 MOB2Q70IA6 237 aa17.39■□□□□ 0.37
SDCCAG3-210ENST00000481114 ANKRD18AQ8IVF6 992 aa17.39■□□□□ 0.37
SDCCAG3-210ENST00000481114 SCAF8Q9UPN6 1271 aaKnown RBP17.39■□□□□ 0.37
SDCCAG3-210ENST00000481114 HPS5Q9UPZ3 1129 aa17.39■□□□□ 0.37
SDCCAG3-210ENST00000481114 XDHP47989 1333 aa17.39■□□□□ 0.37
SDCCAG3-210ENST00000481114 USP17L3A6NCW0 530 aa17.38■□□□□ 0.37
SDCCAG3-210ENST00000481114 USP17L4A6NCW7 530 aa17.38■□□□□ 0.37
SDCCAG3-210ENST00000481114 UBE2Q2LH0YL09 131 aa17.38■□□□□ 0.37
SDCCAG3-210ENST00000481114 PCCAP05165 728 aaPredicted RBP17.38■□□□□ 0.37
SDCCAG3-210ENST00000481114 ATP2B4P23634 1241 aa17.38■□□□□ 0.37
SDCCAG3-210ENST00000481114 TTLL12Q14166 644 aaPredicted RBP17.38■□□□□ 0.37
SDCCAG3-210ENST00000481114 PKN2Q16513 984 aaKnown RBP17.38■□□□□ 0.37
SDCCAG3-210ENST00000481114 USP17L1Q7RTZ2 530 aa17.38■□□□□ 0.37
SDCCAG3-210ENST00000481114 PODNQ7Z5L7 613 aa17.38■□□□□ 0.37
SDCCAG3-210ENST00000481114 CCDC191Q8NCU4 936 aa17.38■□□□□ 0.37
SDCCAG3-210ENST00000481114 JARID2Q92833 1246 aaPredicted RBP17.38■□□□□ 0.37
SDCCAG3-210ENST00000481114 GMLQ99445 158 aa17.38■□□□□ 0.37
SDCCAG3-210ENST00000481114 PHAXQ9H814 394 aaKnown RBP17.38■□□□□ 0.37
SDCCAG3-210ENST00000481114 MBIPQ9NS73 344 aa17.38■□□□□ 0.37
SDCCAG3-210ENST00000481114 TBC1D8O95759 1140 aa17.37■□□□□ 0.37
SDCCAG3-210ENST00000481114 PRPF38BQ5VTL8 546 aaKnown RBP17.37■□□□□ 0.37
SDCCAG3-210ENST00000481114 PRAMEF18Q5VWM3 479 aa17.37■□□□□ 0.37
SDCCAG3-210ENST00000481114 CWC25Q9NXE8 425 aaPredicted RBP17.37■□□□□ 0.37
SDCCAG3-210ENST00000481114 ZNF296Q8WUU4 475 aaPredicted RBP17.36■□□□□ 0.37
SDCCAG3-210ENST00000481114 MYBBP1AQ9BQG0 1328 aaKnown RBP17.36■□□□□ 0.37
SDCCAG3-210ENST00000481114 ELL2O00472 640 aaPredicted RBP17.35■□□□□ 0.37
SDCCAG3-210ENST00000481114 NF2P35240 595 aa17.35■□□□□ 0.37
SDCCAG3-210ENST00000481114 NBPF9Q3BBW0 867 aa17.35■□□□□ 0.37
SDCCAG3-210ENST00000481114 FBXW7Q969H0 707 aa17.35■□□□□ 0.37
SDCCAG3-210ENST00000481114 MKRN3Q13064 507 aaKnown RBP17.34■□□□□ 0.37
SDCCAG3-210ENST00000481114 OGFOD1Q8N543 542 aa17.34■□□□□ 0.37
SDCCAG3-210ENST00000481114 CDC5LQ99459 802 aaKnown RBP17.34■□□□□ 0.37
SDCCAG3-210ENST00000481114 ADAMTS8Q9UP79 889 aa17.34■□□□□ 0.37
SDCCAG3-210ENST00000481114 SPEF2Q9C093 1822 aa17.33■□□□□ 0.37
SDCCAG3-210ENST00000481114 GPR25O00155 361 aa17.33■□□□□ 0.36
SDCCAG3-210ENST00000481114 DDX58O95786 925 aaKnown RBP17.33■□□□□ 0.36
SDCCAG3-210ENST00000481114 TM4SF4P48230 202 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms