RNA–Protein interactions for RNA: ENST00000480750.3

SRGAP3-206, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-206ENST00000480750 POLLQ9UGP5 575 aa11.58□□□□□ -0.56
SRGAP3-206ENST00000480750 GGA1Q9UJY5 639 aa11.58□□□□□ -0.56
SRGAP3-206ENST00000480750 PSME4Q14997 1843 aa11.58□□□□□ -0.56
SRGAP3-206ENST00000480750 E9PSI1 815 aa11.57□□□□□ -0.56
SRGAP3-206ENST00000480750 IGHMBP2P38935 993 aaKnown RBP11.57□□□□□ -0.56
SRGAP3-206ENST00000480750 EPS15P42566 896 aa11.57□□□□□ -0.56
SRGAP3-206ENST00000480750 GMPSP49915 693 aaPredicted RBP11.57□□□□□ -0.56
SRGAP3-206ENST00000480750 DOK7Q18PE1 504 aa11.57□□□□□ -0.56
SRGAP3-206ENST00000480750 MAP1SQ66K74 1059 aaPredicted RBP11.57□□□□□ -0.56
SRGAP3-206ENST00000480750 SLC4A10Q6U841 1118 aa11.57□□□□□ -0.56
SRGAP3-206ENST00000480750 USP50Q70EL3 339 aaPredicted RBP11.57□□□□□ -0.56
SRGAP3-206ENST00000480750 DNAJC5GQ8N7S2 189 aa11.57□□□□□ -0.56
SRGAP3-206ENST00000480750 TTLL11Q8NHH1 800 aa11.57□□□□□ -0.56
SRGAP3-206ENST00000480750 TBC1D16Q8TBP0 767 aa11.57□□□□□ -0.56
SRGAP3-206ENST00000480750 GREM2Q9H772 168 aa11.57□□□□□ -0.56
SRGAP3-206ENST00000480750 KCNQ5Q9NR82 932 aa11.57□□□□□ -0.56
SRGAP3-206ENST00000480750 ADARB2Q9NS39 739 aaKnown RBP11.57□□□□□ -0.56
SRGAP3-206ENST00000480750 SCN9AQ15858 1988 aa11.57□□□□□ -0.56
SRGAP3-206ENST00000480750 XDHP47989 1333 aa11.57□□□□□ -0.56
SRGAP3-206ENST00000480750 SHTN1A0MZ66 631 aa11.56□□□□□ -0.56
SRGAP3-206ENST00000480750 YDJCA8MPS7 323 aa11.56□□□□□ -0.56
SRGAP3-206ENST00000480750 H7C1D1 291 aa11.56□□□□□ -0.56
SRGAP3-206ENST00000480750 H7C1W4 665 aa11.56□□□□□ -0.56
SRGAP3-206ENST00000480750 CCER2I3L3R5 266 aa11.56□□□□□ -0.56
SRGAP3-206ENST00000480750 ECE2O60344 883 aa11.56□□□□□ -0.56
SRGAP3-206ENST00000480750 SLFN5Q08AF3 891 aa11.56□□□□□ -0.56
SRGAP3-206ENST00000480750 CNTROBQ8N137 903 aa11.56□□□□□ -0.56
SRGAP3-206ENST00000480750 MPHOSPH8Q99549 860 aa11.56□□□□□ -0.56
SRGAP3-206ENST00000480750 CREBZFQ9NS37 354 aa11.56□□□□□ -0.56
SRGAP3-206ENST00000480750 PODXL2Q9NZ53 605 aa11.56□□□□□ -0.56
SRGAP3-206ENST00000480750 GPRC5DQ9NZD1 345 aa11.56□□□□□ -0.56
SRGAP3-206ENST00000480750 CHMP3Q9Y3E7 222 aa11.56□□□□□ -0.56
SRGAP3-206ENST00000480750 ATP2B4P23634 1241 aa11.55□□□□□ -0.56
SRGAP3-206ENST00000480750 CASP7P55210 303 aa11.55□□□□□ -0.56
SRGAP3-206ENST00000480750 FMR1Q06787 632 aaKnown RBP eCLIP11.55□□□□□ -0.56
SRGAP3-206ENST00000480750 DIEXFQ68CQ4 756 aaKnown RBP11.55□□□□□ -0.56
SRGAP3-206ENST00000480750 MRPL50Q8N5N7 158 aaKnown RBP11.55□□□□□ -0.56
SRGAP3-206ENST00000480750 C9orf78Q9NZ63 289 aaPredicted RBP11.55□□□□□ -0.56
SRGAP3-206ENST00000480750 RTL9Q8NET4 1388 aa11.54□□□□□ -0.56
SRGAP3-206ENST00000480750 A0A1B0GUL6 1792 aa11.54□□□□□ -0.56
SRGAP3-206ENST00000480750 TMEM88BA6NKF7 163 aa11.54□□□□□ -0.56
SRGAP3-206ENST00000480750 PSMD14O00487 310 aa11.54□□□□□ -0.56
SRGAP3-206ENST00000480750 CENPBP07199 599 aaPredicted RBP11.54□□□□□ -0.56
SRGAP3-206ENST00000480750 ITGA6P23229 1130 aa11.54□□□□□ -0.56
SRGAP3-206ENST00000480750 FAM161AQ3B820 660 aa11.54□□□□□ -0.56
SRGAP3-206ENST00000480750 EPHA10Q5JZY3 1008 aa11.54□□□□□ -0.56
SRGAP3-206ENST00000480750 BEND3Q5T5X7 828 aa11.54□□□□□ -0.56
SRGAP3-206ENST00000480750 SSH1Q8WYL5 1049 aa11.54□□□□□ -0.56
SRGAP3-206ENST00000480750 BSDC1Q9NW68 430 aaPredicted RBP11.54□□□□□ -0.56
SRGAP3-206ENST00000480750 MKRN1Q9UHC7 482 aaKnown RBP11.54□□□□□ -0.56
SRGAP3-206ENST00000480750 CNOT7Q9UIV1 285 aaKnown RBP11.54□□□□□ -0.56
SRGAP3-206ENST00000480750 ZBTB12Q9Y330 459 aaPredicted RBP11.54□□□□□ -0.56
SRGAP3-206ENST00000480750 PASKQ96RG2 1323 aa11.54□□□□□ -0.56
SRGAP3-206ENST00000480750 ANKRD18BA2A2Z9 1011 aa11.53□□□□□ -0.56
SRGAP3-206ENST00000480750 SNAP23O00161 211 aa11.53□□□□□ -0.56
SRGAP3-206ENST00000480750 KCNJ4P48050 445 aa11.53□□□□□ -0.56
SRGAP3-206ENST00000480750 TAF7LQ5H9L4 462 aa11.53□□□□□ -0.56
SRGAP3-206ENST00000480750 PLA2G12BQ9BX93 195 aa11.53□□□□□ -0.56
SRGAP3-206ENST00000480750 SRCIN1Q9C0H9 1055 aa11.53□□□□□ -0.56
SRGAP3-206ENST00000480750 RNF216Q9NWF9 866 aaPredicted RBP11.53□□□□□ -0.56
SRGAP3-206ENST00000480750 GRM8O00222 908 aa11.52□□□□□ -0.57
SRGAP3-206ENST00000480750 ALDH1L1O75891 902 aa11.52□□□□□ -0.57
SRGAP3-206ENST00000480750 ITGBL1O95965 494 aaPredicted RBP11.52□□□□□ -0.57
SRGAP3-206ENST00000480750 RPS12P25398 132 aaKnown RBP11.52□□□□□ -0.57
SRGAP3-206ENST00000480750 CCT4P50991 539 aaKnown RBP11.52□□□□□ -0.57
SRGAP3-206ENST00000480750 IFIT5Q13325 482 aaKnown RBP11.52□□□□□ -0.57
SRGAP3-206ENST00000480750 MICALL2Q8IY33 904 aa11.52□□□□□ -0.57
SRGAP3-206ENST00000480750 FBXW7Q969H0 707 aa11.52□□□□□ -0.57
SRGAP3-206ENST00000480750 ZNF594Q96JF6 807 aaPredicted RBP11.52□□□□□ -0.57
SRGAP3-206ENST00000480750 ANKRD2Q9GZV1 360 aa11.52□□□□□ -0.57
SRGAP3-206ENST00000480750 ABT1Q9ULW3 272 aaKnown RBP11.52□□□□□ -0.57
SRGAP3-206ENST00000480750 MINPP1Q9UNW1 487 aa11.52□□□□□ -0.57
SRGAP3-206ENST00000480750 CSF1RP07333 972 aa11.51□□□□□ -0.57
SRGAP3-206ENST00000480750 FOXO4P98177 505 aa11.51□□□□□ -0.57
SRGAP3-206ENST00000480750 CCDC57Q2TAC2 916 aa11.51□□□□□ -0.57
SRGAP3-206ENST00000480750 RBM26Q5T8P6 1007 aaKnown RBP11.51□□□□□ -0.57
SRGAP3-206ENST00000480750 DLK2Q6UY11 383 aa11.51□□□□□ -0.57
SRGAP3-206ENST00000480750 PAXIP1Q6ZW49 1069 aaPredicted RBP11.51□□□□□ -0.57
SRGAP3-206ENST00000480750 JMYQ8N9B5 988 aa11.51□□□□□ -0.57
SRGAP3-206ENST00000480750 HELBQ8NG08 1087 aaPredicted RBP11.51□□□□□ -0.57
SRGAP3-206ENST00000480750 DPF2Q92785 391 aa11.51□□□□□ -0.57
SRGAP3-206ENST00000480750 PTPRCP08575 1304 aa11.51□□□□□ -0.57
SRGAP3-206ENST00000480750 MED23Q9ULK4 1368 aa11.51□□□□□ -0.57
SRGAP3-206ENST00000480750 KLRK1P26718 216 aa11.5□□□□□ -0.57
SRGAP3-206ENST00000480750 TBC1D10BQ4KMP7 808 aaPredicted RBP11.5□□□□□ -0.57
SRGAP3-206ENST00000480750 LMBR1LQ6UX01 489 aa11.5□□□□□ -0.57
SRGAP3-206ENST00000480750 TRMT2AQ8IZ69 625 aaKnown RBP11.5□□□□□ -0.57
SRGAP3-206ENST00000480750 TRPM4Q8TD43 1214 aa11.5□□□□□ -0.57
SRGAP3-206ENST00000480750 SUCLG2Q96I99 432 aa11.5□□□□□ -0.57
SRGAP3-206ENST00000480750 MXD3Q9BW11 206 aa11.5□□□□□ -0.57
SRGAP3-206ENST00000480750 SMC4Q9NTJ3 1288 aa11.5□□□□□ -0.57
SRGAP3-206ENST00000480750 LEMD3Q9Y2U8 911 aa11.5□□□□□ -0.57
SRGAP3-206ENST00000480750 TRAF5O00463 557 aa11.49□□□□□ -0.57
SRGAP3-206ENST00000480750 TAF5LO75529 589 aa11.49□□□□□ -0.57
SRGAP3-206ENST00000480750 EGFRP00533 1210 aa11.49□□□□□ -0.57
SRGAP3-206ENST00000480750 NBPF7P0C2Y1 421 aaPredicted RBP11.49□□□□□ -0.57
SRGAP3-206ENST00000480750 HIRAP54198 1017 aaPredicted RBP11.49□□□□□ -0.57
SRGAP3-206ENST00000480750 ALDH1L2Q3SY69 923 aa11.49□□□□□ -0.57
SRGAP3-206ENST00000480750 SAMD7Q7Z3H4 446 aa11.49□□□□□ -0.57
SRGAP3-206ENST00000480750 PODNQ7Z5L7 613 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms