RNA–Protein interactions for RNA: ENST00000480561.5

UQCRC1-209, Transcript of ubiquinol-cytochrome c reductase core protein 1, human

TSL 2

Gene UQCRC1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Mitochondria, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UQCRC1-209	ENST00000480561	IRS4	O14654	1257 aa	Predicted RBP	18.62	■□□□□ 0.57
UQCRC1-209	ENST00000480561	RPS8	P62241	208 aa	Known RBP	18.62	■□□□□ 0.57
UQCRC1-209	ENST00000480561	DOK7	Q18PE1	504 aa		18.62	■□□□□ 0.57
UQCRC1-209	ENST00000480561	CCDC146	Q8IYE0	955 aa		18.62	■□□□□ 0.57
UQCRC1-209	ENST00000480561	RUNDC1	Q96C34	613 aa		18.62	■□□□□ 0.57
UQCRC1-209	ENST00000480561	CASP8AP2	Q9UKL3	1982 aa		18.61	■□□□□ 0.57
UQCRC1-209	ENST00000480561	HSP90B1	P14625	803 aa	Known RBP	18.61	■□□□□ 0.57
UQCRC1-209	ENST00000480561	KIF4B	Q2VIQ3	1234 aa		18.61	■□□□□ 0.57
UQCRC1-209	ENST00000480561	RBM26	Q5T8P6	1007 aa	Known RBP	18.61	■□□□□ 0.57
UQCRC1-209	ENST00000480561	ZC3H12C	Q9C0D7	883 aa	Known RBP	18.61	■□□□□ 0.57
UQCRC1-209	ENST00000480561	KCNQ5	Q9NR82	932 aa		18.61	■□□□□ 0.57
UQCRC1-209	ENST00000480561	PODXL2	Q9NZ53	605 aa		18.61	■□□□□ 0.57
UQCRC1-209	ENST00000480561	COL4A1	P02462	1669 aa		18.6	■□□□□ 0.57
UQCRC1-209	ENST00000480561	VIL1	P09327	827 aa	Known RBP	18.6	■□□□□ 0.57
UQCRC1-209	ENST00000480561	ZNF157	P51786	506 aa	Predicted RBP	18.6	■□□□□ 0.57
UQCRC1-209	ENST00000480561	RTL5	Q5HYW3	569 aa	Predicted RBP	18.6	■□□□□ 0.57
UQCRC1-209	ENST00000480561	SULF1	Q8IWU6	871 aa		18.6	■□□□□ 0.57
UQCRC1-209	ENST00000480561	ZNF609	O15014	1411 aa		18.59	■□□□□ 0.57
UQCRC1-209	ENST00000480561	MYBBP1A	Q9BQG0	1328 aa	Known RBP	18.59	■□□□□ 0.57
UQCRC1-209	ENST00000480561	KIF23	Q02241	960 aa	Predicted RBP	18.59	■□□□□ 0.57
UQCRC1-209	ENST00000480561	DUSP27	Q5VZP5	1158 aa		18.59	■□□□□ 0.57
UQCRC1-209	ENST00000480561	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.59	■□□□□ 0.57
UQCRC1-209	ENST00000480561	GGA3	Q9NZ52	723 aa		18.59	■□□□□ 0.57
UQCRC1-209	ENST00000480561	UFL1	O94874	794 aa		18.58	■□□□□ 0.56
UQCRC1-209	ENST00000480561	GOLGA2	Q08379	1002 aa		18.58	■□□□□ 0.56
UQCRC1-209	ENST00000480561	WDR43	Q15061	677 aa	Known RBP eCLIP	18.58	■□□□□ 0.56
UQCRC1-209	ENST00000480561		G3V3G9	751 aa		18.57	■□□□□ 0.56
UQCRC1-209	ENST00000480561	SLC10A3	P09131	477 aa		18.57	■□□□□ 0.56
UQCRC1-209	ENST00000480561	ZNF280A	P59817	542 aa	Predicted RBP	18.57	■□□□□ 0.56
UQCRC1-209	ENST00000480561	DCAF8	Q5TAQ9	597 aa		18.57	■□□□□ 0.56
UQCRC1-209	ENST00000480561	ANKIB1	Q9P2G1	1089 aa		18.57	■□□□□ 0.56
UQCRC1-209	ENST00000480561	GGA1	Q9UJY5	639 aa		18.57	■□□□□ 0.56
UQCRC1-209	ENST00000480561	RIC3	Q7Z5B4	369 aa		18.56	■□□□□ 0.56
UQCRC1-209	ENST00000480561	AGBL3	Q8NEM8	1001 aa		18.56	■□□□□ 0.56
UQCRC1-209	ENST00000480561	CDCA5	Q96FF9	252 aa		18.56	■□□□□ 0.56
UQCRC1-209	ENST00000480561	SEC31B	Q9NQW1	1179 aa		18.56	■□□□□ 0.56
UQCRC1-209	ENST00000480561	RNF186	Q9NXI6	227 aa		18.56	■□□□□ 0.56
UQCRC1-209	ENST00000480561	TNRC18	O15417	2968 aa	Predicted RBP	18.55	■□□□□ 0.56
UQCRC1-209	ENST00000480561	ASTN2	O75129	1339 aa	Predicted RBP	18.55	■□□□□ 0.56
UQCRC1-209	ENST00000480561	PDE4DIP	Q5VU43	2346 aa		18.55	■□□□□ 0.56
UQCRC1-209	ENST00000480561	CCDC152	Q4G0S7	254 aa		18.55	■□□□□ 0.56
UQCRC1-209	ENST00000480561	RSBN1L	Q6PCB5	846 aa	Predicted RBP	18.55	■□□□□ 0.56
UQCRC1-209	ENST00000480561	REM2	Q8IYK8	340 aa	Predicted RBP	18.55	■□□□□ 0.56
UQCRC1-209	ENST00000480561	MBIP	Q9NS73	344 aa		18.55	■□□□□ 0.56
UQCRC1-209	ENST00000480561	SCN9A	Q15858	1988 aa		18.54	■□□□□ 0.56
UQCRC1-209	ENST00000480561	TRPA1	O75762	1119 aa		18.54	■□□□□ 0.56
UQCRC1-209	ENST00000480561	FKBP1B	P68106	108 aa		18.54	■□□□□ 0.56
UQCRC1-209	ENST00000480561	CCDC191	Q8NCU4	936 aa		18.54	■□□□□ 0.56
UQCRC1-209	ENST00000480561	PCCA	P05165	728 aa	Predicted RBP	18.53	■□□□□ 0.56
UQCRC1-209	ENST00000480561	ANGEL2	Q5VTE6	544 aa	Known RBP	18.53	■□□□□ 0.56
UQCRC1-209	ENST00000480561	CSRNP1	Q96S65	589 aa		18.53	■□□□□ 0.56
UQCRC1-209	ENST00000480561	ADAMTS8	Q9UP79	889 aa		18.53	■□□□□ 0.56
UQCRC1-209	ENST00000480561	XDH	P47989	1333 aa		18.52	■□□□□ 0.56
UQCRC1-209	ENST00000480561	PITPNM2	Q9BZ72	1349 aa		18.52	■□□□□ 0.56
UQCRC1-209	ENST00000480561	PDE8A	O60658	829 aa		18.52	■□□□□ 0.56
UQCRC1-209	ENST00000480561	USP17L8	P0C7I0	530 aa		18.52	■□□□□ 0.56
UQCRC1-209	ENST00000480561	ZNF853	P0CG23	659 aa		18.52	■□□□□ 0.56
UQCRC1-209	ENST00000480561	SCARF1	Q14162	830 aa		18.52	■□□□□ 0.56
UQCRC1-209	ENST00000480561	RASAL3	Q86YV0	1011 aa		18.52	■□□□□ 0.56
UQCRC1-209	ENST00000480561	GML	Q99445	158 aa		18.52	■□□□□ 0.56
UQCRC1-209	ENST00000480561	MYD88	Q99836	296 aa		18.52	■□□□□ 0.56
UQCRC1-209	ENST00000480561	CWC25	Q9NXE8	425 aa	Predicted RBP	18.52	■□□□□ 0.56
UQCRC1-209	ENST00000480561	POLR2A	P24928	1970 aa	Known RBP	18.51	■□□□□ 0.55
UQCRC1-209	ENST00000480561	ANKRD18A	Q8IVF6	992 aa		18.51	■□□□□ 0.55
UQCRC1-209	ENST00000480561	PHAX	Q9H814	394 aa	Known RBP	18.51	■□□□□ 0.55
UQCRC1-209	ENST00000480561	MYOZ2	Q9NPC6	264 aa		18.51	■□□□□ 0.55
UQCRC1-209	ENST00000480561	IFT57	Q9NWB7	429 aa		18.51	■□□□□ 0.55
UQCRC1-209	ENST00000480561	USP17L3	A6NCW0	530 aa		18.5	■□□□□ 0.55
UQCRC1-209	ENST00000480561	USP17L4	A6NCW7	530 aa		18.5	■□□□□ 0.55
UQCRC1-209	ENST00000480561	ATP2B4	P23634	1241 aa		18.5	■□□□□ 0.55
UQCRC1-209	ENST00000480561	CALD1	Q05682	793 aa	Known RBP	18.5	■□□□□ 0.55
UQCRC1-209	ENST00000480561	USP17L1	Q7RTZ2	530 aa		18.5	■□□□□ 0.55
UQCRC1-209	ENST00000480561	PODN	Q7Z5L7	613 aa		18.5	■□□□□ 0.55
UQCRC1-209	ENST00000480561	CTU1	Q7Z7A3	348 aa	Known RBP	18.5	■□□□□ 0.55
UQCRC1-209	ENST00000480561	PAPPA2	Q9BXP8	1791 aa		18.5	■□□□□ 0.55
UQCRC1-209	ENST00000480561	DDX58	O95786	925 aa	Known RBP	18.49	■□□□□ 0.55
UQCRC1-209	ENST00000480561	GNAI1	P63096	354 aa		18.49	■□□□□ 0.55
UQCRC1-209	ENST00000480561	CHMP4A	Q9BY43	222 aa		18.49	■□□□□ 0.55
UQCRC1-209	ENST00000480561	SOX10	P56693	466 aa		18.48	■□□□□ 0.55
UQCRC1-209	ENST00000480561	CCDC85A	Q96PX6	553 aa	Predicted RBP	18.48	■□□□□ 0.55
UQCRC1-209	ENST00000480561	CDC5L	Q99459	802 aa	Known RBP	18.48	■□□□□ 0.55
UQCRC1-209	ENST00000480561	METTL22	Q9BUU2	404 aa	Predicted RBP	18.48	■□□□□ 0.55
UQCRC1-209	ENST00000480561	MED23	Q9ULK4	1368 aa		18.47	■□□□□ 0.55
UQCRC1-209	ENST00000480561	DDX10	Q13206	875 aa	Known RBP	18.47	■□□□□ 0.55
UQCRC1-209	ENST00000480561	AKAP11	Q9UKA4	1901 aa		18.47	■□□□□ 0.55
UQCRC1-209	ENST00000480561	PSME4	Q14997	1843 aa		18.46	■□□□□ 0.55
UQCRC1-209	ENST00000480561	ELL2	O00472	640 aa	Predicted RBP	18.46	■□□□□ 0.55
UQCRC1-209	ENST00000480561	CTSW	P56202	376 aa		18.46	■□□□□ 0.55
UQCRC1-209	ENST00000480561	JARID2	Q92833	1246 aa	Predicted RBP	18.46	■□□□□ 0.55
UQCRC1-209	ENST00000480561	PCDH10	Q9P2E7	1040 aa		18.46	■□□□□ 0.55
UQCRC1-209	ENST00000480561	CCDC30	Q5VVM6	783 aa		18.45	■□□□□ 0.54
UQCRC1-209	ENST00000480561	PKN2	Q16513	984 aa	Known RBP	18.44	■□□□□ 0.54
UQCRC1-209	ENST00000480561	DACT2	Q5SW24	774 aa		18.44	■□□□□ 0.54
UQCRC1-209	ENST00000480561	OGFOD1	Q8N543	542 aa		18.44	■□□□□ 0.54
UQCRC1-209	ENST00000480561	C8orf58	Q8NAV2	365 aa		18.44	■□□□□ 0.54
UQCRC1-209	ENST00000480561	BSDC1	Q9NW68	430 aa	Predicted RBP	18.44	■□□□□ 0.54
UQCRC1-209	ENST00000480561	MAP3K2	Q9Y2U5	619 aa		18.44	■□□□□ 0.54
UQCRC1-209	ENST00000480561	MYO3B	Q8WXR4	1341 aa		18.44	■□□□□ 0.54
UQCRC1-209	ENST00000480561	UBE2Q2L	H0YL09	131 aa		18.43	■□□□□ 0.54
UQCRC1-209	ENST00000480561	APAF1	O14727	1248 aa		18.43	■□□□□ 0.54

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