RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 NPHP1O15259 732 aa11.95□□□□□ -0.5
COMMD4-203ENST00000480484 NBPF7P0C2Y1 421 aaPredicted RBP11.95□□□□□ -0.5
COMMD4-203ENST00000480484 SLFN14P0C7P3 912 aa11.95□□□□□ -0.5
COMMD4-203ENST00000480484 PTH1RQ03431 593 aa11.95□□□□□ -0.5
COMMD4-203ENST00000480484 DDX41Q9UJV9 622 aaKnown RBP11.95□□□□□ -0.5
COMMD4-203ENST00000480484 NDUFB9Q9Y6M9 179 aa11.95□□□□□ -0.5
COMMD4-203ENST00000480484 LTN1O94822 1766 aa11.95□□□□□ -0.5
COMMD4-203ENST00000480484 SOS1Q07889 1333 aaPredicted RBP11.95□□□□□ -0.5
COMMD4-203ENST00000480484 PATL2C9JE40 543 aaKnown RBP11.95□□□□□ -0.5
COMMD4-203ENST00000480484 EIF2S2P20042 333 aaKnown RBP11.95□□□□□ -0.5
COMMD4-203ENST00000480484 PNMA2Q9UL42 364 aa11.95□□□□□ -0.5
COMMD4-203ENST00000480484 SLIT3O75094 1523 aa11.95□□□□□ -0.5
COMMD4-203ENST00000480484 PXDNQ92626 1479 aa11.94□□□□□ -0.5
COMMD4-203ENST00000480484 CCT4P50991 539 aaKnown RBP11.94□□□□□ -0.5
COMMD4-203ENST00000480484 FAM200AQ8TCP9 573 aa11.94□□□□□ -0.5
COMMD4-203ENST00000480484 ORAI2Q96SN7 254 aa11.94□□□□□ -0.5
COMMD4-203ENST00000480484 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.94□□□□□ -0.5
COMMD4-203ENST00000480484 GIPC2Q8TF65 315 aa11.94□□□□□ -0.5
COMMD4-203ENST00000480484 TRERF1Q96PN7 1200 aa11.94□□□□□ -0.5
COMMD4-203ENST00000480484 RGPD2P0DJD1 1756 aa11.94□□□□□ -0.5
COMMD4-203ENST00000480484 PSME1Q06323 249 aa11.94□□□□□ -0.5
COMMD4-203ENST00000480484 TAF7Q15545 349 aaPredicted RBP11.94□□□□□ -0.5
COMMD4-203ENST00000480484 CCDC30Q5VVM6 783 aa11.94□□□□□ -0.5
COMMD4-203ENST00000480484 ANKLE2Q86XL3 938 aa11.94□□□□□ -0.5
COMMD4-203ENST00000480484 KIF18AQ8NI77 898 aa11.94□□□□□ -0.5
COMMD4-203ENST00000480484 PA2G4Q9UQ80 394 aaKnown RBP11.94□□□□□ -0.5
COMMD4-203ENST00000480484 SNX14Q9Y5W7 946 aa11.94□□□□□ -0.5
COMMD4-203ENST00000480484 GNAI2P04899 355 aa11.93□□□□□ -0.5
COMMD4-203ENST00000480484 GJB2P29033 226 aa11.93□□□□□ -0.5
COMMD4-203ENST00000480484 GLMNQ92990 594 aa11.93□□□□□ -0.5
COMMD4-203ENST00000480484 SYTL4Q96C24 671 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-203ENST00000480484 USP44Q9H0E7 712 aa11.93□□□□□ -0.5
COMMD4-203ENST00000480484 CCDC66A2RUB6 948 aa11.93□□□□□ -0.5
COMMD4-203ENST00000480484 TYRO3Q06418 890 aa11.93□□□□□ -0.5
COMMD4-203ENST00000480484 ARID5BQ14865 1188 aa11.93□□□□□ -0.5
COMMD4-203ENST00000480484 MAP3K11Q16584 847 aa11.93□□□□□ -0.5
COMMD4-203ENST00000480484 KRT222Q8N1A0 295 aa11.93□□□□□ -0.5
COMMD4-203ENST00000480484 ERCC4Q92889 916 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-203ENST00000480484 ZBTB9Q96C00 473 aa11.93□□□□□ -0.5
COMMD4-203ENST00000480484 RYDENQ9NUL5 291 aaKnown RBP11.93□□□□□ -0.5
COMMD4-203ENST00000480484 LIMCH1Q9UPQ0 1083 aa11.93□□□□□ -0.5
COMMD4-203ENST00000480484 SURF6O75683 361 aaKnown RBP11.92□□□□□ -0.5
COMMD4-203ENST00000480484 IRX5P78411 483 aaPredicted RBP11.92□□□□□ -0.5
COMMD4-203ENST00000480484 TERF2Q15554 542 aa11.92□□□□□ -0.5
COMMD4-203ENST00000480484 ANO6Q4KMQ2 910 aa11.92□□□□□ -0.5
COMMD4-203ENST00000480484 HDGFL1Q5TGJ6 251 aa11.92□□□□□ -0.5
COMMD4-203ENST00000480484 CCDC102AQ96A19 550 aa11.92□□□□□ -0.5
COMMD4-203ENST00000480484 NUP62CLQ9H1M0 184 aa11.92□□□□□ -0.5
COMMD4-203ENST00000480484 GOLGA6L4A6NEF3 574 aa11.92□□□□□ -0.5
COMMD4-203ENST00000480484 HTATSF1O43719 755 aaKnown RBP11.92□□□□□ -0.5
COMMD4-203ENST00000480484 HSPA4P34932 840 aa11.92□□□□□ -0.5
COMMD4-203ENST00000480484 ZSCAN25Q6NSZ9 544 aa11.92□□□□□ -0.5
COMMD4-203ENST00000480484 DNAJC14Q6Y2X3 702 aaPredicted RBP11.92□□□□□ -0.5
COMMD4-203ENST00000480484 IP6K1Q92551 441 aa11.92□□□□□ -0.5
COMMD4-203ENST00000480484 PMM1Q92871 262 aa11.92□□□□□ -0.5
COMMD4-203ENST00000480484 SNRKQ9NRH2 765 aa11.92□□□□□ -0.5
COMMD4-203ENST00000480484 TFIP11Q9UBB9 837 aaKnown RBP11.92□□□□□ -0.5
COMMD4-203ENST00000480484 RPS6KL1Q9Y6S9 549 aa11.92□□□□□ -0.5
COMMD4-203ENST00000480484 NFAT5O94916 1531 aa11.92□□□□□ -0.5
COMMD4-203ENST00000480484 CASTP20810 708 aaKnown RBP11.92□□□□□ -0.5
COMMD4-203ENST00000480484 TAGLNQ01995 201 aaKnown RBP11.92□□□□□ -0.5
COMMD4-203ENST00000480484 CEP135Q66GS9 1140 aa11.92□□□□□ -0.5
COMMD4-203ENST00000480484 MPRIPQ6WCQ1 1025 aa11.92□□□□□ -0.5
COMMD4-203ENST00000480484 PPP1R42Q7Z4L9 355 aa11.92□□□□□ -0.5
COMMD4-203ENST00000480484 PCMTD1Q96MG8 357 aaPredicted RBP11.92□□□□□ -0.5
COMMD4-203ENST00000480484 ST7Q9NRC1 585 aa11.92□□□□□ -0.5
COMMD4-203ENST00000480484 PRAMEF22A3QJZ6 481 aa11.91□□□□□ -0.5
COMMD4-203ENST00000480484 LIG1P18858 919 aa11.91□□□□□ -0.5
COMMD4-203ENST00000480484 EDC3Q96F86 508 aaKnown RBP11.91□□□□□ -0.5
COMMD4-203ENST00000480484 DDX11Q96FC9 970 aa11.91□□□□□ -0.5
COMMD4-203ENST00000480484 TNMDQ9H2S6 317 aa11.91□□□□□ -0.5
COMMD4-203ENST00000480484 CBX8Q9HC52 389 aa11.91□□□□□ -0.5
COMMD4-203ENST00000480484 PAXBP1Q9Y5B6 917 aa11.91□□□□□ -0.5
COMMD4-203ENST00000480484 MRVI1Q9Y6F6 885 aa11.91□□□□□ -0.5
COMMD4-203ENST00000480484 CICQ96RK0 1608 aaPredicted RBP11.91□□□□□ -0.5
COMMD4-203ENST00000480484 STK3Q13188 491 aa11.91□□□□□ -0.5
COMMD4-203ENST00000480484 CLIP2Q9UDT6 1046 aa11.91□□□□□ -0.5
COMMD4-203ENST00000480484 ZNF215Q9UL58 517 aaPredicted RBP11.91□□□□□ -0.5
COMMD4-203ENST00000480484 MORC2Q9Y6X9 1032 aaPredicted RBP11.91□□□□□ -0.5
COMMD4-203ENST00000480484 SLFNL1Q499Z3 407 aa11.9□□□□□ -0.5
COMMD4-203ENST00000480484 KMT5BQ4FZB7 885 aa11.9□□□□□ -0.5
COMMD4-203ENST00000480484 TIGD1Q96MW7 591 aa11.9□□□□□ -0.5
COMMD4-203ENST00000480484 GOLGB1Q14789 3259 aaKnown RBP11.9□□□□□ -0.5
COMMD4-203ENST00000480484 PRPF40BQ6NWY9 871 aaKnown RBP11.9□□□□□ -0.5
COMMD4-203ENST00000480484 KLHDC4Q8TBB5 520 aa11.9□□□□□ -0.5
COMMD4-203ENST00000480484 PI4K2BQ8TCG2 481 aa11.9□□□□□ -0.5
COMMD4-203ENST00000480484 CACTINQ8WUQ7 758 aaKnown RBP11.9□□□□□ -0.5
COMMD4-203ENST00000480484 MTMR6Q9Y217 621 aa11.9□□□□□ -0.5
COMMD4-203ENST00000480484 TRMT1Q9NXH9 659 aaKnown RBP11.9□□□□□ -0.51
COMMD4-203ENST00000480484 DACT1Q9NYF0 836 aa11.9□□□□□ -0.51
COMMD4-203ENST00000480484 CHPF2Q9P2E5 772 aa11.9□□□□□ -0.51
COMMD4-203ENST00000480484 PLEKHG2Q9H7P9 1386 aa11.89□□□□□ -0.51
COMMD4-203ENST00000480484 ZNF75DP51815 510 aa11.89□□□□□ -0.51
COMMD4-203ENST00000480484 ZC3H6P61129 1189 aaKnown RBP11.89□□□□□ -0.51
COMMD4-203ENST00000480484 SYCP1Q15431 976 aa11.89□□□□□ -0.51
COMMD4-203ENST00000480484 ELF2Q15723 593 aa11.89□□□□□ -0.51
COMMD4-203ENST00000480484 ZNF530Q6P9A1 599 aaPredicted RBP11.89□□□□□ -0.51
COMMD4-203ENST00000480484 CDC37L1Q7L3B6 337 aa11.89□□□□□ -0.51
COMMD4-203ENST00000480484 TTC6Q86TZ1 520 aa11.89□□□□□ -0.51
COMMD4-203ENST00000480484 ZNF397Q8NF99 534 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms