RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 CRAMP1Q96RY5 1269 aa15.38■□□□□ 0.05
TRA2B-212ENST00000480461 PDZRN3Q9UPQ7 1066 aa15.38■□□□□ 0.05
TRA2B-212ENST00000480461 LRRFIP2Q9Y608 721 aaKnown RBP15.38■□□□□ 0.05
TRA2B-212ENST00000480461 IQCA1LA6NCM1 817 aa15.37■□□□□ 0.05
TRA2B-212ENST00000480461 TMEM88BA6NKF7 163 aa15.37■□□□□ 0.05
TRA2B-212ENST00000480461 UBTFL1P0CB47 393 aaPredicted RBP15.37■□□□□ 0.05
TRA2B-212ENST00000480461 OLFM4Q6UX06 510 aa15.37■□□□□ 0.05
TRA2B-212ENST00000480461 CELF1Q92879 486 aaKnown RBP15.37■□□□□ 0.05
TRA2B-212ENST00000480461 L3MBTL3Q96JM7 780 aaPredicted RBP15.37■□□□□ 0.05
TRA2B-212ENST00000480461 SLX4Q8IY92 1834 aa15.36■□□□□ 0.05
TRA2B-212ENST00000480461 ITGBL1O95965 494 aaPredicted RBP15.36■□□□□ 0.05
TRA2B-212ENST00000480461 GNAI3P08754 354 aa15.36■□□□□ 0.05
TRA2B-212ENST00000480461 HSPA8P11142 646 aaKnown RBP15.36■□□□□ 0.05
TRA2B-212ENST00000480461 RPGRQ92834 1020 aaKnown RBP15.36■□□□□ 0.05
TRA2B-212ENST00000480461 RBM17Q96I25 401 aaKnown RBP15.36■□□□□ 0.05
TRA2B-212ENST00000480461 TAF1DQ9H5J8 278 aaPredicted RBP15.36■□□□□ 0.05
TRA2B-212ENST00000480461 ZBTB40Q9NUA8 1239 aa15.36■□□□□ 0.05
TRA2B-212ENST00000480461 HSP90B1P14625 803 aaKnown RBP15.35■□□□□ 0.05
TRA2B-212ENST00000480461 CCDC152Q4G0S7 254 aa15.35■□□□□ 0.05
TRA2B-212ENST00000480461 PRPF40BQ6NWY9 871 aaKnown RBP15.35■□□□□ 0.05
TRA2B-212ENST00000480461 CNKSR1Q969H4 720 aa15.35■□□□□ 0.05
TRA2B-212ENST00000480461 CRBNQ96SW2 442 aa15.35■□□□□ 0.05
TRA2B-212ENST00000480461 C1orf115Q9H7X2 142 aa15.35■□□□□ 0.05
TRA2B-212ENST00000480461 THSD7BQ9C0I4 1608 aa15.35■□□□□ 0.05
TRA2B-212ENST00000480461 LAMB2P55268 1798 aa15.34■□□□□ 0.05
TRA2B-212ENST00000480461 ITGA6P23229 1130 aa15.34■□□□□ 0.05
TRA2B-212ENST00000480461 ALDH1B1P30837 517 aa15.34■□□□□ 0.05
TRA2B-212ENST00000480461 RFX5P48382 616 aaPredicted RBP15.34■□□□□ 0.05
TRA2B-212ENST00000480461 RPS8P62241 208 aaKnown RBP15.34■□□□□ 0.05
TRA2B-212ENST00000480461 DDX46Q7L014 1031 aaKnown RBP15.34■□□□□ 0.05
TRA2B-212ENST00000480461 ZNF594Q96JF6 807 aaPredicted RBP15.34■□□□□ 0.05
TRA2B-212ENST00000480461 RASSF10A6NK89 507 aa15.33■□□□□ 0.04
TRA2B-212ENST00000480461 BBOX1O75936 387 aa15.33■□□□□ 0.04
TRA2B-212ENST00000480461 GNAI2P04899 355 aa15.33■□□□□ 0.04
TRA2B-212ENST00000480461 IRX6P78412 446 aaPredicted RBP15.33■□□□□ 0.04
TRA2B-212ENST00000480461 GRAPQ13588 217 aa15.33■□□□□ 0.04
TRA2B-212ENST00000480461 GRAPLQ8TC17 118 aaPredicted RBP15.33■□□□□ 0.04
TRA2B-212ENST00000480461 DDX19BQ9UMR2 479 aa15.33■□□□□ 0.04
TRA2B-212ENST00000480461 RTL9Q8NET4 1388 aa15.33■□□□□ 0.04
TRA2B-212ENST00000480461 TAF1P21675 1872 aa15.33■□□□□ 0.04
TRA2B-212ENST00000480461 PNMA6EA0A0J9YXQ4 647 aa15.32■□□□□ 0.04
TRA2B-212ENST00000480461 WTIPA6NIX2 430 aaPredicted RBP15.32■□□□□ 0.04
TRA2B-212ENST00000480461 EAPPQ56P03 285 aaPredicted RBP15.32■□□□□ 0.04
TRA2B-212ENST00000480461 SOGA3Q5TF21 947 aa15.32■□□□□ 0.04
TRA2B-212ENST00000480461 SIRT2Q8IXJ6 389 aa15.32■□□□□ 0.04
TRA2B-212ENST00000480461 KLHDC4Q8TBB5 520 aa15.32■□□□□ 0.04
TRA2B-212ENST00000480461 ZNF541Q9H0D2 1346 aa15.32■□□□□ 0.04
TRA2B-212ENST00000480461 ATP8B2P98198 1209 aa15.31■□□□□ 0.04
TRA2B-212ENST00000480461 IFIT5Q13325 482 aaKnown RBP15.31■□□□□ 0.04
TRA2B-212ENST00000480461 MTX1Q13505 466 aa15.31■□□□□ 0.04
TRA2B-212ENST00000480461 PUS3Q9BZE2 481 aaKnown RBP15.31■□□□□ 0.04
TRA2B-212ENST00000480461 CHMP3Q9Y3E7 222 aa15.31■□□□□ 0.04
TRA2B-212ENST00000480461 ATP6V0A2Q9Y487 856 aa15.31■□□□□ 0.04
TRA2B-212ENST00000480461 ANKRD18BA2A2Z9 1011 aa15.3■□□□□ 0.04
TRA2B-212ENST00000480461 PPEF1O14829 653 aaPredicted RBP15.3■□□□□ 0.04
TRA2B-212ENST00000480461 MAP2K1Q02750 393 aaPredicted RBP15.3■□□□□ 0.04
TRA2B-212ENST00000480461 DEFB115Q30KQ5 88 aa15.3■□□□□ 0.04
TRA2B-212ENST00000480461 SP8Q8IXZ3 490 aa15.3■□□□□ 0.04
TRA2B-212ENST00000480461 EXOC6Q8TAG9 804 aa15.3■□□□□ 0.04
TRA2B-212ENST00000480461 WDR33Q9C0J8 1336 aaKnown RBP15.3■□□□□ 0.04
TRA2B-212ENST00000480461 PCDH10Q9P2E7 1040 aa15.3■□□□□ 0.04
TRA2B-212ENST00000480461 HACL1Q9UJ83 578 aa15.3■□□□□ 0.04
TRA2B-212ENST00000480461 EPHX2P34913 555 aa15.29■□□□□ 0.04
TRA2B-212ENST00000480461 MLLT1Q03111 559 aaPredicted RBP15.29■□□□□ 0.04
TRA2B-212ENST00000480461 PTPN12Q05209 780 aaKnown RBP15.29■□□□□ 0.04
TRA2B-212ENST00000480461 CCDC57Q2TAC2 916 aa15.29■□□□□ 0.04
TRA2B-212ENST00000480461 CEP85Q6P2H3 762 aa15.29■□□□□ 0.04
TRA2B-212ENST00000480461 ANKRD18AQ8IVF6 992 aa15.29■□□□□ 0.04
TRA2B-212ENST00000480461 BSDC1Q9NW68 430 aaPredicted RBP15.29■□□□□ 0.04
TRA2B-212ENST00000480461 MINPP1Q9UNW1 487 aa15.29■□□□□ 0.04
TRA2B-212ENST00000480461 PCDHB15Q9Y5E8 787 aa15.29■□□□□ 0.04
TRA2B-212ENST00000480461 SNED1Q8TER0 1413 aa15.28■□□□□ 0.04
TRA2B-212ENST00000480461 POLA2Q14181 598 aa15.28■□□□□ 0.04
TRA2B-212ENST00000480461 LRRC24Q50LG9 513 aa15.28■□□□□ 0.04
TRA2B-212ENST00000480461 CCDC93Q567U6 631 aa15.28■□□□□ 0.04
TRA2B-212ENST00000480461 MAP1SQ66K74 1059 aaPredicted RBP15.28■□□□□ 0.04
TRA2B-212ENST00000480461 CDC5LQ99459 802 aaKnown RBP15.28■□□□□ 0.04
TRA2B-212ENST00000480461 PA2G4Q9UQ80 394 aaKnown RBP15.28■□□□□ 0.04
TRA2B-212ENST00000480461 HDAC5Q9UQL6 1122 aa15.28■□□□□ 0.04
TRA2B-212ENST00000480461 CLEC11AQ9Y240 323 aa15.28■□□□□ 0.04
TRA2B-212ENST00000480461 RIPOR2Q9Y4F9 1068 aa15.28■□□□□ 0.04
TRA2B-212ENST00000480461 SRGAP3O43295 1099 aa15.27■□□□□ 0.04
TRA2B-212ENST00000480461 RGS19P49795 217 aa15.27■□□□□ 0.04
TRA2B-212ENST00000480461 GPSM2P81274 684 aa15.27■□□□□ 0.04
TRA2B-212ENST00000480461 CNTROBQ8N137 903 aa15.27■□□□□ 0.04
TRA2B-212ENST00000480461 SSH3Q8TE77 659 aa15.27■□□□□ 0.04
TRA2B-212ENST00000480461 ZNF277Q9NRM2 450 aaPredicted RBP15.27■□□□□ 0.04
TRA2B-212ENST00000480461 CCDC85CA6NKD9 419 aa15.26■□□□□ 0.03
TRA2B-212ENST00000480461 SNAP23O00161 211 aa15.26■□□□□ 0.03
TRA2B-212ENST00000480461 FKBP4Q02790 459 aaKnown RBP eCLIP15.26■□□□□ 0.03
TRA2B-212ENST00000480461 LDHAL6AQ6ZMR3 332 aa15.26■□□□□ 0.03
TRA2B-212ENST00000480461 ATG9AQ7Z3C6 839 aa15.26■□□□□ 0.03
TRA2B-212ENST00000480461 PNMA8AQ86V59 439 aaPredicted RBP15.26■□□□□ 0.03
TRA2B-212ENST00000480461 HELBQ8NG08 1087 aaPredicted RBP15.26■□□□□ 0.03
TRA2B-212ENST00000480461 ABT1Q9ULW3 272 aaKnown RBP15.26■□□□□ 0.03
TRA2B-212ENST00000480461 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.26■□□□□ 0.03
TRA2B-212ENST00000480461 LTBP1Q14766 1721 aa15.26■□□□□ 0.03
TRA2B-212ENST00000480461 CENPBP07199 599 aaPredicted RBP15.25■□□□□ 0.03
TRA2B-212ENST00000480461 IGHMBP2P38935 993 aaKnown RBP15.25■□□□□ 0.03
TRA2B-212ENST00000480461 COPRSQ9NQ92 184 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms