RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 SSH3Q8TE77 659 aa10.26□□□□□ -0.77
USP54-212ENST00000480210 EYA3Q99504 573 aa10.26□□□□□ -0.77
USP54-212ENST00000480210 CNNM1Q9NRU3 951 aa10.26□□□□□ -0.77
USP54-212ENST00000480210 LEMD3Q9Y2U8 911 aa10.26□□□□□ -0.77
USP54-212ENST00000480210 MROH5Q6ZUA9 1318 aa10.26□□□□□ -0.77
USP54-212ENST00000480210 EYA2O00167 538 aa10.25□□□□□ -0.77
USP54-212ENST00000480210 IL15P40933 162 aaPredicted RBP10.25□□□□□ -0.77
USP54-212ENST00000480210 RFX5P48382 616 aaPredicted RBP10.25□□□□□ -0.77
USP54-212ENST00000480210 FKBP4Q02790 459 aaKnown RBP eCLIP10.25□□□□□ -0.77
USP54-212ENST00000480210 PTPN12Q05209 780 aaKnown RBP10.25□□□□□ -0.77
USP54-212ENST00000480210 G3BP1Q13283 466 aaKnown RBP eCLIP10.25□□□□□ -0.77
USP54-212ENST00000480210 POLA2Q14181 598 aa10.25□□□□□ -0.77
USP54-212ENST00000480210 CEP85Q6P2H3 762 aa10.25□□□□□ -0.77
USP54-212ENST00000480210 CCDC85AQ96PX6 553 aaPredicted RBP10.25□□□□□ -0.77
USP54-212ENST00000480210 RTFDC1Q9BY42 306 aaPredicted RBP10.25□□□□□ -0.77
USP54-212ENST00000480210 MINPP1Q9UNW1 487 aa10.25□□□□□ -0.77
USP54-212ENST00000480210 XDHP47989 1333 aa10.25□□□□□ -0.77
USP54-212ENST00000480210 DPP8Q6V1X1 898 aaPredicted RBP10.24□□□□□ -0.77
USP54-212ENST00000480210 ARHGAP27Q6ZUM4 889 aa10.24□□□□□ -0.77
USP54-212ENST00000480210 ERC1Q8IUD2 1116 aa10.24□□□□□ -0.77
USP54-212ENST00000480210 CRBNQ96SW2 442 aa10.24□□□□□ -0.77
USP54-212ENST00000480210 TAOK3Q9H2K8 898 aa10.24□□□□□ -0.77
USP54-212ENST00000480210 ANKIB1Q9P2G1 1089 aa10.24□□□□□ -0.77
USP54-212ENST00000480210 NSFL1CQ9UNZ2 370 aaKnown RBP10.24□□□□□ -0.77
USP54-212ENST00000480210 NOP58Q9Y2X3 529 aaKnown RBP10.24□□□□□ -0.77
USP54-212ENST00000480210 RIPOR2Q9Y4F9 1068 aa10.24□□□□□ -0.77
USP54-212ENST00000480210 NEFLP07196 543 aa10.23□□□□□ -0.77
USP54-212ENST00000480210 YBX3P16989 372 aaKnown RBP eCLIP10.23□□□□□ -0.77
USP54-212ENST00000480210 CHRNDQ07001 517 aa10.23□□□□□ -0.77
USP54-212ENST00000480210 UBE4AQ14139 1066 aa10.23□□□□□ -0.77
USP54-212ENST00000480210 ERICH6BQ5W0A0 696 aa10.23□□□□□ -0.77
USP54-212ENST00000480210 CEP126Q9P2H0 1117 aa10.23□□□□□ -0.77
USP54-212ENST00000480210 GGA1Q9UJY5 639 aa10.23□□□□□ -0.77
USP54-212ENST00000480210 AKAP2Q9Y2D5 859 aa10.23□□□□□ -0.77
USP54-212ENST00000480210 ZC3H4Q9UPT8 1303 aaKnown RBP10.23□□□□□ -0.77
USP54-212ENST00000480210 A0A1B0GUL6 1792 aa10.23□□□□□ -0.77
USP54-212ENST00000480210 PNMA6EA0A0J9YXQ4 647 aa10.22□□□□□ -0.77
USP54-212ENST00000480210 RAB11FIP3O75154 756 aa10.22□□□□□ -0.77
USP54-212ENST00000480210 LMNB1P20700 586 aa10.22□□□□□ -0.77
USP54-212ENST00000480210 C15orf52Q6ZUT6 534 aaKnown RBP10.22□□□□□ -0.77
USP54-212ENST00000480210 ZNF594Q96JF6 807 aaPredicted RBP10.22□□□□□ -0.77
USP54-212ENST00000480210 C6orf229H3BNL8 230 aa10.21□□□□□ -0.77
USP54-212ENST00000480210 SURF6O75683 361 aaKnown RBP10.21□□□□□ -0.77
USP54-212ENST00000480210 PDE8BO95263 885 aa10.21□□□□□ -0.77
USP54-212ENST00000480210 KCNJ4P48050 445 aa10.21□□□□□ -0.77
USP54-212ENST00000480210 GPSM2P81274 684 aa10.21□□□□□ -0.77
USP54-212ENST00000480210 METTL24Q5JXM2 366 aa10.21□□□□□ -0.77
USP54-212ENST00000480210 TBC1D16Q8TBP0 767 aa10.21□□□□□ -0.77
USP54-212ENST00000480210 ZC3H12CQ9C0D7 883 aaKnown RBP10.21□□□□□ -0.77
USP54-212ENST00000480210 RWDD1Q9H446 243 aaPredicted RBP10.21□□□□□ -0.77
USP54-212ENST00000480210 C1orf115Q9H7X2 142 aa10.21□□□□□ -0.77
USP54-212ENST00000480210 GPR108Q9NPR9 543 aa10.21□□□□□ -0.77
USP54-212ENST00000480210 ZNF219Q9P2Y4 722 aaPredicted RBP10.21□□□□□ -0.77
USP54-212ENST00000480210 SNED1Q8TER0 1413 aa10.21□□□□□ -0.78
USP54-212ENST00000480210 LTBP1Q14766 1721 aa10.21□□□□□ -0.78
USP54-212ENST00000480210 ZNF804BA4D1E1 1349 aa10.2□□□□□ -0.78
USP54-212ENST00000480210 NFKBIEO00221 500 aa10.2□□□□□ -0.78
USP54-212ENST00000480210 ZBTB22O15209 634 aa10.2□□□□□ -0.78
USP54-212ENST00000480210 IFIT1P09914 478 aaKnown RBP10.2□□□□□ -0.78
USP54-212ENST00000480210 IARSP41252 1262 aaKnown RBP10.2□□□□□ -0.78
USP54-212ENST00000480210 KIAA2012Q0VF49 1180 aa10.2□□□□□ -0.78
USP54-212ENST00000480210 HDAC1Q13547 482 aaPredicted RBP10.2□□□□□ -0.78
USP54-212ENST00000480210 WASHC4Q2M389 1173 aa10.2□□□□□ -0.78
USP54-212ENST00000480210 LRRC24Q50LG9 513 aa10.2□□□□□ -0.78
USP54-212ENST00000480210 ATG9AQ7Z3C6 839 aa10.2□□□□□ -0.78
USP54-212ENST00000480210 EXOC6Q8TAG9 804 aa10.2□□□□□ -0.78
USP54-212ENST00000480210 JDP2Q8WYK2 163 aa10.2□□□□□ -0.78
USP54-212ENST00000480210 GCC1Q96CN9 775 aa10.2□□□□□ -0.78
USP54-212ENST00000480210 TSHZ2Q9NRE2 1034 aa10.2□□□□□ -0.78
USP54-212ENST00000480210 MED23Q9ULK4 1368 aa10.19□□□□□ -0.78
USP54-212ENST00000480210 G3V3G9 751 aa10.19□□□□□ -0.78
USP54-212ENST00000480210 UFL1O94874 794 aa10.19□□□□□ -0.78
USP54-212ENST00000480210 SLC5A1P13866 664 aa10.19□□□□□ -0.78
USP54-212ENST00000480210 OS9Q13438 667 aaPredicted RBP10.19□□□□□ -0.78
USP54-212ENST00000480210 PUM3Q15397 648 aaKnown RBP10.19□□□□□ -0.78
USP54-212ENST00000480210 DCAF8Q5TAQ9 597 aa10.19□□□□□ -0.78
USP54-212ENST00000480210 PODNQ7Z5L7 613 aa10.19□□□□□ -0.78
USP54-212ENST00000480210 KLHDC4Q8TBB5 520 aa10.19□□□□□ -0.78
USP54-212ENST00000480210 LPIN2Q92539 896 aa10.19□□□□□ -0.78
USP54-212ENST00000480210 KIF1BPQ96EK5 621 aa10.19□□□□□ -0.78
USP54-212ENST00000480210 PUS3Q9BZE2 481 aaKnown RBP10.19□□□□□ -0.78
USP54-212ENST00000480210 DCTPP1Q9H773 170 aa10.19□□□□□ -0.78
USP54-212ENST00000480210 POLLQ9UGP5 575 aa10.19□□□□□ -0.78
USP54-212ENST00000480210 WWC3Q9ULE0 1092 aa10.19□□□□□ -0.78
USP54-212ENST00000480210 PA2G4Q9UQ80 394 aaKnown RBP10.19□□□□□ -0.78
USP54-212ENST00000480210 PPIP5K2O43314 1243 aa10.18□□□□□ -0.78
USP54-212ENST00000480210 PRKCSHP14314 528 aaPredicted RBP10.18□□□□□ -0.78
USP54-212ENST00000480210 CAVIN4Q5BKX8 364 aa10.18□□□□□ -0.78
USP54-212ENST00000480210 SIRT2Q8IXJ6 389 aa10.18□□□□□ -0.78
USP54-212ENST00000480210 LARGE2Q8N3Y3 721 aa10.18□□□□□ -0.78
USP54-212ENST00000480210 VGLL2Q8N8G2 317 aa10.18□□□□□ -0.78
USP54-212ENST00000480210 COA1Q9GZY4 146 aa10.18□□□□□ -0.78
USP54-212ENST00000480210 SIL1Q9H173 461 aa10.18□□□□□ -0.78
USP54-212ENST00000480210 ZBTB47Q9UFB7 747 aaPredicted RBP10.18□□□□□ -0.78
USP54-212ENST00000480210 PCDHB15Q9Y5E8 787 aa10.18□□□□□ -0.78
USP54-212ENST00000480210 COL4A1P02462 1669 aa10.18□□□□□ -0.78
USP54-212ENST00000480210 MYH13Q9UKX3 1938 aa10.17□□□□□ -0.78
USP54-212ENST00000480210 PSME4Q14997 1843 aa10.17□□□□□ -0.78
USP54-212ENST00000480210 TAF5LO75529 589 aa10.17□□□□□ -0.78
USP54-212ENST00000480210 FGFR2P21802 821 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms