RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 PRPF40BQ6NWY9 871 aaKnown RBP14.53□□□□□ -0.08
TRAPPC12-219ENST00000479955 CEP126Q9P2H0 1117 aa14.53□□□□□ -0.08
TRAPPC12-219ENST00000479955 PA2G4Q9UQ80 394 aaKnown RBP14.53□□□□□ -0.08
TRAPPC12-219ENST00000479955 RIPOR2Q9Y4F9 1068 aa14.53□□□□□ -0.08
TRAPPC12-219ENST00000479955 IGHDP01880 384 aa14.52□□□□□ -0.09
TRAPPC12-219ENST00000479955 METTL24Q5JXM2 366 aa14.52□□□□□ -0.09
TRAPPC12-219ENST00000479955 CENPQQ7L2Z9 268 aaPredicted RBP14.52□□□□□ -0.09
TRAPPC12-219ENST00000479955 KIF1BPQ96EK5 621 aa14.52□□□□□ -0.09
TRAPPC12-219ENST00000479955 MINPP1Q9UNW1 487 aa14.52□□□□□ -0.09
TRAPPC12-219ENST00000479955 EXOC6BQ9Y2D4 811 aa14.52□□□□□ -0.09
TRAPPC12-219ENST00000479955 AKAP2Q9Y2D5 859 aa14.52□□□□□ -0.09
TRAPPC12-219ENST00000479955 TAF1P21675 1872 aa14.51□□□□□ -0.09
TRAPPC12-219ENST00000479955 LRRC24Q50LG9 513 aa14.51□□□□□ -0.09
TRAPPC12-219ENST00000479955 ATG9AQ7Z3C6 839 aa14.51□□□□□ -0.09
TRAPPC12-219ENST00000479955 SMC5Q8IY18 1101 aa14.51□□□□□ -0.09
TRAPPC12-219ENST00000479955 RTKN2Q8IZC4 609 aa14.51□□□□□ -0.09
TRAPPC12-219ENST00000479955 PUS3Q9BZE2 481 aaKnown RBP14.51□□□□□ -0.09
TRAPPC12-219ENST00000479955 LRRCC1Q9C099 1032 aa14.51□□□□□ -0.09
TRAPPC12-219ENST00000479955 KIAA1551Q9HCM1 1747 aa14.51□□□□□ -0.09
TRAPPC12-219ENST00000479955 PDE8BO95263 885 aa14.5□□□□□ -0.09
TRAPPC12-219ENST00000479955 CHRNDQ07001 517 aa14.5□□□□□ -0.09
TRAPPC12-219ENST00000479955 NLGN2Q8NFZ4 835 aa14.5□□□□□ -0.09
TRAPPC12-219ENST00000479955 GPR108Q9NPR9 543 aa14.5□□□□□ -0.09
TRAPPC12-219ENST00000479955 ANKIB1Q9P2G1 1089 aa14.5□□□□□ -0.09
TRAPPC12-219ENST00000479955 LEMD3Q9Y2U8 911 aa14.5□□□□□ -0.09
TRAPPC12-219ENST00000479955 GTF3C3Q9Y5Q9 886 aa14.5□□□□□ -0.09
TRAPPC12-219ENST00000479955 XDHP47989 1333 aa14.49□□□□□ -0.09
TRAPPC12-219ENST00000479955 ATP2B4P23634 1241 aa14.49□□□□□ -0.09
TRAPPC12-219ENST00000479955 KCNJ4P48050 445 aa14.49□□□□□ -0.09
TRAPPC12-219ENST00000479955 CCDC93Q567U6 631 aa14.49□□□□□ -0.09
TRAPPC12-219ENST00000479955 CLASRPQ8N2M8 674 aaKnown RBP14.49□□□□□ -0.09
TRAPPC12-219ENST00000479955 MPNDQ8N594 471 aa14.49□□□□□ -0.09
TRAPPC12-219ENST00000479955 RHPN1Q8TCX5 695 aa14.49□□□□□ -0.09
TRAPPC12-219ENST00000479955 C7orf43Q8WVR3 580 aa14.49□□□□□ -0.09
TRAPPC12-219ENST00000479955 PODXL2Q9NZ53 605 aa14.49□□□□□ -0.09
TRAPPC12-219ENST00000479955 NSFL1CQ9UNZ2 370 aaKnown RBP14.49□□□□□ -0.09
TRAPPC12-219ENST00000479955 BCS1LQ9Y276 419 aa14.49□□□□□ -0.09
TRAPPC12-219ENST00000479955 SPEF2Q9C093 1822 aa14.49□□□□□ -0.09
TRAPPC12-219ENST00000479955 BRCA1P38398 1863 aaKnown RBP14.48□□□□□ -0.09
TRAPPC12-219ENST00000479955 SLX4Q8IY92 1834 aa14.48□□□□□ -0.09
TRAPPC12-219ENST00000479955 C21orf2O43822 256 aa14.48□□□□□ -0.09
TRAPPC12-219ENST00000479955 SASH1O94885 1247 aa14.48□□□□□ -0.09
TRAPPC12-219ENST00000479955 UBE4AQ14139 1066 aa14.48□□□□□ -0.09
TRAPPC12-219ENST00000479955 ANKRD45Q5TZF3 282 aa14.48□□□□□ -0.09
TRAPPC12-219ENST00000479955 B4GALNT3Q6L9W6 998 aa14.48□□□□□ -0.09
TRAPPC12-219ENST00000479955 DPP8Q6V1X1 898 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC12-219ENST00000479955 SUPT20HQ8NEM7 779 aa14.48□□□□□ -0.09
TRAPPC12-219ENST00000479955 CACNA1SQ13698 1873 aa14.48□□□□□ -0.09
TRAPPC12-219ENST00000479955 APBB1O00213 710 aa14.47□□□□□ -0.09
TRAPPC12-219ENST00000479955 TFCP2Q12800 502 aa14.47□□□□□ -0.09
TRAPPC12-219ENST00000479955 PUM3Q15397 648 aaKnown RBP14.47□□□□□ -0.09
TRAPPC12-219ENST00000479955 GGA1Q9UJY5 639 aa14.47□□□□□ -0.09
TRAPPC12-219ENST00000479955 LRRC37AA6NMS7 1700 aa14.46□□□□□ -0.09
TRAPPC12-219ENST00000479955 KDM2BQ8NHM5 1336 aa14.46□□□□□ -0.09
TRAPPC12-219ENST00000479955 TAF5LO75529 589 aa14.46□□□□□ -0.09
TRAPPC12-219ENST00000479955 IFIT1P09914 478 aaKnown RBP14.46□□□□□ -0.09
TRAPPC12-219ENST00000479955 GPSM2P81274 684 aa14.46□□□□□ -0.09
TRAPPC12-219ENST00000479955 ATP2B3Q16720 1220 aa14.46□□□□□ -0.09
TRAPPC12-219ENST00000479955 VGLL2Q8N8G2 317 aa14.46□□□□□ -0.09
TRAPPC12-219ENST00000479955 HELBQ8NG08 1087 aaPredicted RBP14.46□□□□□ -0.09
TRAPPC12-219ENST00000479955 LPIN2Q92539 896 aa14.46□□□□□ -0.09
TRAPPC12-219ENST00000479955 EYA3Q99504 573 aa14.46□□□□□ -0.09
TRAPPC12-219ENST00000479955 VPS33BQ9H267 617 aa14.46□□□□□ -0.09
TRAPPC12-219ENST00000479955 ZNF219Q9P2Y4 722 aaPredicted RBP14.46□□□□□ -0.09
TRAPPC12-219ENST00000479955 ZNF804BA4D1E1 1349 aa14.45□□□□□ -0.1
TRAPPC12-219ENST00000479955 C6orf229H3BNL8 230 aa14.45□□□□□ -0.1
TRAPPC12-219ENST00000479955 IFIT2P09913 472 aaKnown RBP14.45□□□□□ -0.1
TRAPPC12-219ENST00000479955 SLC5A1P13866 664 aa14.45□□□□□ -0.1
TRAPPC12-219ENST00000479955 NUCB1Q02818 461 aa14.45□□□□□ -0.1
TRAPPC12-219ENST00000479955 PSMD1Q99460 953 aa14.45□□□□□ -0.1
TRAPPC12-219ENST00000479955 ARFGEF1Q9Y6D6 1849 aa14.45□□□□□ -0.1
TRAPPC12-219ENST00000479955 DCAF8L1A6NGE4 600 aa14.44□□□□□ -0.1
TRAPPC12-219ENST00000479955 UFL1O94874 794 aa14.44□□□□□ -0.1
TRAPPC12-219ENST00000479955 TNNI3KQ59H18 835 aa14.44□□□□□ -0.1
TRAPPC12-219ENST00000479955 CAVIN4Q5BKX8 364 aa14.44□□□□□ -0.1
TRAPPC12-219ENST00000479955 CHD1LQ86WJ1 897 aa14.44□□□□□ -0.1
TRAPPC12-219ENST00000479955 TBC1D16Q8TBP0 767 aa14.44□□□□□ -0.1
TRAPPC12-219ENST00000479955 NEUROD6Q96NK8 337 aa14.44□□□□□ -0.1
TRAPPC12-219ENST00000479955 RTFDC1Q9BY42 306 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC12-219ENST00000479955 ZC3H12CQ9C0D7 883 aaKnown RBP14.44□□□□□ -0.1
TRAPPC12-219ENST00000479955 IL1RAPL2Q9NP60 686 aa14.44□□□□□ -0.1
TRAPPC12-219ENST00000479955 FPGT-TNNI3KV9GXZ4 949 aa14.44□□□□□ -0.1
TRAPPC12-219ENST00000479955 COL4A1P02462 1669 aa14.44□□□□□ -0.1
TRAPPC12-219ENST00000479955 A0A1B0GUL7 405 aa14.43□□□□□ -0.1
TRAPPC12-219ENST00000479955 GRIN3BO60391 1043 aa14.43□□□□□ -0.1
TRAPPC12-219ENST00000479955 FGFR2P21802 821 aa14.43□□□□□ -0.1
TRAPPC12-219ENST00000479955 TIMM10P62072 90 aa14.43□□□□□ -0.1
TRAPPC12-219ENST00000479955 FKBP4Q02790 459 aaKnown RBP eCLIP14.43□□□□□ -0.1
TRAPPC12-219ENST00000479955 GORABQ5T7V8 394 aa14.43□□□□□ -0.1
TRAPPC12-219ENST00000479955 C15orf52Q6ZUT6 534 aaKnown RBP14.43□□□□□ -0.1
TRAPPC12-219ENST00000479955 AACSQ86V21 672 aa14.43□□□□□ -0.1
TRAPPC12-219ENST00000479955 GPATCH3Q96I76 525 aa14.43□□□□□ -0.1
TRAPPC12-219ENST00000479955 GPR162Q16538 588 aa14.42□□□□□ -0.1
TRAPPC12-219ENST00000479955 WASHC4Q2M389 1173 aa14.42□□□□□ -0.1
TRAPPC12-219ENST00000479955 CCDC158Q5M9N0 1113 aa14.42□□□□□ -0.1
TRAPPC12-219ENST00000479955 PELP1Q8IZL8 1130 aaKnown RBP14.42□□□□□ -0.1
TRAPPC12-219ENST00000479955 EAF2Q96CJ1 260 aaPredicted RBP14.42□□□□□ -0.1
TRAPPC12-219ENST00000479955 TAOK3Q9H2K8 898 aa14.42□□□□□ -0.1
TRAPPC12-219ENST00000479955 POLLQ9UGP5 575 aa14.42□□□□□ -0.1
TRAPPC12-219ENST00000479955 WWC3Q9ULE0 1092 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms