RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 SAMD7Q7Z3H4 446 aa17.22■□□□□ 0.35
ABCF1-206ENST00000479542 KRT26Q7Z3Y9 468 aa17.22■□□□□ 0.35
ABCF1-206ENST00000479542 AGBL3Q8NEM8 1001 aa17.22■□□□□ 0.35
ABCF1-206ENST00000479542 DCPSQ96C86 337 aaKnown RBP17.22■□□□□ 0.35
ABCF1-206ENST00000479542 RTL9Q8NET4 1388 aa17.21■□□□□ 0.35
ABCF1-206ENST00000479542 SHTN1A0MZ66 631 aa17.21■□□□□ 0.35
ABCF1-206ENST00000479542 HUNKP57058 714 aa17.21■□□□□ 0.35
ABCF1-206ENST00000479542 GRM1Q13255 1194 aa17.21■□□□□ 0.35
ABCF1-206ENST00000479542 REM2Q8IYK8 340 aaPredicted RBP17.21■□□□□ 0.35
ABCF1-206ENST00000479542 C2orf69Q8N8R5 385 aa17.21■□□□□ 0.35
ABCF1-206ENST00000479542 PRKRIP1Q9H875 184 aaPredicted RBP17.21■□□□□ 0.35
ABCF1-206ENST00000479542 GBA2Q9HCG7 927 aaPredicted RBP17.21■□□□□ 0.35
ABCF1-206ENST00000479542 SAGE1Q9NXZ1 904 aa17.21■□□□□ 0.35
ABCF1-206ENST00000479542 FAM155AB1AL88 458 aaPredicted RBP17.2■□□□□ 0.34
ABCF1-206ENST00000479542 RIMBP2O15034 1052 aa17.2■□□□□ 0.34
ABCF1-206ENST00000479542 MMP14P50281 582 aa17.2■□□□□ 0.34
ABCF1-206ENST00000479542 ZNF280AP59817 542 aaPredicted RBP17.2■□□□□ 0.34
ABCF1-206ENST00000479542 RGMBQ6NW40 437 aa17.2■□□□□ 0.34
ABCF1-206ENST00000479542 METTL22Q9BUU2 404 aaPredicted RBP17.2■□□□□ 0.34
ABCF1-206ENST00000479542 GGA1Q9UJY5 639 aa17.2■□□□□ 0.34
ABCF1-206ENST00000479542 DDX58O95786 925 aaKnown RBP17.19■□□□□ 0.34
ABCF1-206ENST00000479542 TBC1D10BQ4KMP7 808 aaPredicted RBP17.19■□□□□ 0.34
ABCF1-206ENST00000479542 CCDC30Q5VVM6 783 aa17.19■□□□□ 0.34
ABCF1-206ENST00000479542 PODNQ7Z5L7 613 aa17.19■□□□□ 0.34
ABCF1-206ENST00000479542 PHAXQ9H814 394 aaKnown RBP17.19■□□□□ 0.34
ABCF1-206ENST00000479542 ZNF408Q9H9D4 720 aa17.19■□□□□ 0.34
ABCF1-206ENST00000479542 KCNQ5Q9NR82 932 aa17.19■□□□□ 0.34
ABCF1-206ENST00000479542 CWC25Q9NXE8 425 aaPredicted RBP17.19■□□□□ 0.34
ABCF1-206ENST00000479542 EGFRP00533 1210 aa17.18■□□□□ 0.34
ABCF1-206ENST00000479542 FKBP1BP68106 108 aa17.18■□□□□ 0.34
ABCF1-206ENST00000479542 DOK7Q18PE1 504 aa17.18■□□□□ 0.34
ABCF1-206ENST00000479542 KIF4BQ2VIQ3 1234 aa17.18■□□□□ 0.34
ABCF1-206ENST00000479542 SULF1Q8IWU6 871 aa17.18■□□□□ 0.34
ABCF1-206ENST00000479542 GMLQ99445 158 aa17.18■□□□□ 0.34
ABCF1-206ENST00000479542 SEC31BQ9NQW1 1179 aa17.18■□□□□ 0.34
ABCF1-206ENST00000479542 ANKIB1Q9P2G1 1089 aa17.18■□□□□ 0.34
ABCF1-206ENST00000479542 POLR2AP24928 1970 aaKnown RBP17.18■□□□□ 0.34
ABCF1-206ENST00000479542 XDHP47989 1333 aa17.18■□□□□ 0.34
ABCF1-206ENST00000479542 PITPNM2Q9BZ72 1349 aa17.18■□□□□ 0.34
ABCF1-206ENST00000479542 APAF1O14727 1248 aa17.17■□□□□ 0.34
ABCF1-206ENST00000479542 ATP2B4P23634 1241 aa17.17■□□□□ 0.34
ABCF1-206ENST00000479542 NCBP3Q53F19 620 aaKnown RBP17.17■□□□□ 0.34
ABCF1-206ENST00000479542 RSBN1LQ6PCB5 846 aaPredicted RBP17.17■□□□□ 0.34
ABCF1-206ENST00000479542 COL4A1P02462 1669 aa17.16■□□□□ 0.34
ABCF1-206ENST00000479542 G3V3G9 751 aa17.16■□□□□ 0.34
ABCF1-206ENST00000479542 UFL1O94874 794 aa17.16■□□□□ 0.34
ABCF1-206ENST00000479542 RTL5Q5HYW3 569 aaPredicted RBP17.16■□□□□ 0.34
ABCF1-206ENST00000479542 DCAF8Q5TAQ9 597 aa17.16■□□□□ 0.34
ABCF1-206ENST00000479542 ANKRD18AQ8IVF6 992 aa17.16■□□□□ 0.34
ABCF1-206ENST00000479542 MYD88Q99836 296 aa17.16■□□□□ 0.34
ABCF1-206ENST00000479542 MCOLN1Q9GZU1 580 aa17.16■□□□□ 0.34
ABCF1-206ENST00000479542 SCN9AQ15858 1988 aa17.15■□□□□ 0.34
ABCF1-206ENST00000479542 CCDC85CA6NKD9 419 aa17.15■□□□□ 0.34
ABCF1-206ENST00000479542 C8orf58Q8NAV2 365 aa17.15■□□□□ 0.34
ABCF1-206ENST00000479542 CDC5LQ99459 802 aaKnown RBP17.15■□□□□ 0.34
ABCF1-206ENST00000479542 BSDC1Q9NW68 430 aaPredicted RBP17.15■□□□□ 0.34
ABCF1-206ENST00000479542 MLLT1Q03111 559 aaPredicted RBP17.14■□□□□ 0.33
ABCF1-206ENST00000479542 CCDC27Q2M243 656 aa17.14■□□□□ 0.33
ABCF1-206ENST00000479542 KSR2Q6VAB6 950 aa17.14■□□□□ 0.33
ABCF1-206ENST00000479542 ZIC5Q96T25 663 aa17.14■□□□□ 0.33
ABCF1-206ENST00000479542 GGA3Q9NZ52 723 aa17.14■□□□□ 0.33
ABCF1-206ENST00000479542 TSKSQ9UJT2 592 aa17.14■□□□□ 0.33
ABCF1-206ENST00000479542 PSME4Q14997 1843 aa17.14■□□□□ 0.33
ABCF1-206ENST00000479542 CASP8AP2Q9UKL3 1982 aa17.13■□□□□ 0.33
ABCF1-206ENST00000479542 USP17L3A6NCW0 530 aa17.13■□□□□ 0.33
ABCF1-206ENST00000479542 USP17L4A6NCW7 530 aa17.13■□□□□ 0.33
ABCF1-206ENST00000479542 ADM5C9JUS6 153 aa17.13■□□□□ 0.33
ABCF1-206ENST00000479542 SLC10A3P09131 477 aa17.13■□□□□ 0.33
ABCF1-206ENST00000479542 USP17L8P0C7I0 530 aa17.13■□□□□ 0.33
ABCF1-206ENST00000479542 ZNF157P51786 506 aaPredicted RBP17.13■□□□□ 0.33
ABCF1-206ENST00000479542 KIF23Q02241 960 aaPredicted RBP17.13■□□□□ 0.33
ABCF1-206ENST00000479542 FAM161AQ3B820 660 aa17.13■□□□□ 0.33
ABCF1-206ENST00000479542 RBM26Q5T8P6 1007 aaKnown RBP17.13■□□□□ 0.33
ABCF1-206ENST00000479542 USP17L1Q7RTZ2 530 aa17.13■□□□□ 0.33
ABCF1-206ENST00000479542 TTLL11Q8NHH1 800 aa17.13■□□□□ 0.33
ABCF1-206ENST00000479542 ZNF428Q96B54 188 aa17.13■□□□□ 0.33
ABCF1-206ENST00000479542 ELL2O00472 640 aaPredicted RBP17.12■□□□□ 0.33
ABCF1-206ENST00000479542 CTSWP56202 376 aa17.12■□□□□ 0.33
ABCF1-206ENST00000479542 SCARF1Q14162 830 aa17.12■□□□□ 0.33
ABCF1-206ENST00000479542 MED23Q9ULK4 1368 aa17.12■□□□□ 0.33
ABCF1-206ENST00000479542 IGKV5-2P06315 115 aa17.11■□□□□ 0.33
ABCF1-206ENST00000479542 NEXNQ0ZGT2 675 aa17.11■□□□□ 0.33
ABCF1-206ENST00000479542 DGKZQ13574 1117 aa17.11■□□□□ 0.33
ABCF1-206ENST00000479542 DLK2Q6UY11 383 aa17.11■□□□□ 0.33
ABCF1-206ENST00000479542 CDCA5Q96FF9 252 aa17.11■□□□□ 0.33
ABCF1-206ENST00000479542 CSRNP1Q96S65 589 aa17.11■□□□□ 0.33
ABCF1-206ENST00000479542 PLA2G12BQ9BX93 195 aa17.11■□□□□ 0.33
ABCF1-206ENST00000479542 MYOZ2Q9NPC6 264 aa17.11■□□□□ 0.33
ABCF1-206ENST00000479542 RNF186Q9NXI6 227 aa17.11■□□□□ 0.33
ABCF1-206ENST00000479542 MINPP1Q9UNW1 487 aa17.11■□□□□ 0.33
ABCF1-206ENST00000479542 MAP3K2Q9Y2U5 619 aa17.11■□□□□ 0.33
ABCF1-206ENST00000479542 LEMD3Q9Y2U8 911 aa17.11■□□□□ 0.33
ABCF1-206ENST00000479542 MYO3BQ8WXR4 1341 aa17.11■□□□□ 0.33
ABCF1-206ENST00000479542 PI4KAP2A4QPH2 592 aa17.1■□□□□ 0.33
ABCF1-206ENST00000479542 H7C1W4 665 aa17.1■□□□□ 0.33
ABCF1-206ENST00000479542 STRIP1Q5VSL9 837 aa17.1■□□□□ 0.33
ABCF1-206ENST00000479542 ANGEL2Q5VTE6 544 aaKnown RBP17.1■□□□□ 0.33
ABCF1-206ENST00000479542 PI4KAP1Q8N8J0 262 aa17.1■□□□□ 0.33
ABCF1-206ENST00000479542 COA1Q9GZY4 146 aa17.1■□□□□ 0.33
ABCF1-206ENST00000479542 NOM1Q5C9Z4 860 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms