RNA–Protein interactions for RNA: ENST00000479413.1

C9orf85-205, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 1 (best)

Gene C9orf85, Length 902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-205ENST00000479413 DCAF8Q5TAQ9 597 aa18.42■□□□□ 0.54
C9orf85-205ENST00000479413 KRT26Q7Z3Y9 468 aa18.42■□□□□ 0.54
C9orf85-205ENST00000479413 TBC1D16Q8TBP0 767 aa18.42■□□□□ 0.54
C9orf85-205ENST00000479413 ZC3H12CQ9C0D7 883 aaKnown RBP18.42■□□□□ 0.54
C9orf85-205ENST00000479413 ANKIB1Q9P2G1 1089 aa18.42■□□□□ 0.54
C9orf85-205ENST00000479413 COL4A1P02462 1669 aa18.41■□□□□ 0.54
C9orf85-205ENST00000479413 ELL2O00472 640 aaPredicted RBP18.41■□□□□ 0.54
C9orf85-205ENST00000479413 DDX58O95786 925 aaKnown RBP18.41■□□□□ 0.54
C9orf85-205ENST00000479413 HUNKP57058 714 aa18.41■□□□□ 0.54
C9orf85-205ENST00000479413 CCDC191Q8NCU4 936 aa18.41■□□□□ 0.54
C9orf85-205ENST00000479413 DCPSQ96C86 337 aaKnown RBP18.41■□□□□ 0.54
C9orf85-205ENST00000479413 MYD88Q99836 296 aa18.41■□□□□ 0.54
C9orf85-205ENST00000479413 PHAXQ9H814 394 aaKnown RBP18.41■□□□□ 0.54
C9orf85-205ENST00000479413 PRKRIP1Q9H875 184 aaPredicted RBP18.41■□□□□ 0.54
C9orf85-205ENST00000479413 TSKSQ9UJT2 592 aa18.41■□□□□ 0.54
C9orf85-205ENST00000479413 UFL1O94874 794 aa18.4■□□□□ 0.54
C9orf85-205ENST00000479413 NOGQ13253 232 aa18.4■□□□□ 0.54
C9orf85-205ENST00000479413 CWC25Q9NXE8 425 aaPredicted RBP18.4■□□□□ 0.54
C9orf85-205ENST00000479413 PODXL2Q9NZ53 605 aa18.4■□□□□ 0.54
C9orf85-205ENST00000479413 RTL9Q8NET4 1388 aa18.4■□□□□ 0.54
C9orf85-205ENST00000479413 PCCAP05165 728 aaPredicted RBP18.39■□□□□ 0.53
C9orf85-205ENST00000479413 RBM26Q5T8P6 1007 aaKnown RBP18.39■□□□□ 0.53
C9orf85-205ENST00000479413 SEC31BQ9NQW1 1179 aa18.39■□□□□ 0.53
C9orf85-205ENST00000479413 GGA1Q9UJY5 639 aa18.39■□□□□ 0.53
C9orf85-205ENST00000479413 PDE8AO60658 829 aa18.38■□□□□ 0.53
C9orf85-205ENST00000479413 EGFRP00533 1210 aa18.38■□□□□ 0.53
C9orf85-205ENST00000479413 KIF4BQ2VIQ3 1234 aa18.38■□□□□ 0.53
C9orf85-205ENST00000479413 CCDC30Q5VVM6 783 aa18.38■□□□□ 0.53
C9orf85-205ENST00000479413 KCNQ5Q9NR82 932 aa18.38■□□□□ 0.53
C9orf85-205ENST00000479413 SULF1Q8IWU6 871 aa18.37■□□□□ 0.53
C9orf85-205ENST00000479413 C2orf69Q8N8R5 385 aa18.37■□□□□ 0.53
C9orf85-205ENST00000479413 METTL22Q9BUU2 404 aaPredicted RBP18.37■□□□□ 0.53
C9orf85-205ENST00000479413 GBA2Q9HCG7 927 aaPredicted RBP18.37■□□□□ 0.53
C9orf85-205ENST00000479413 CCDC85CA6NKD9 419 aa18.36■□□□□ 0.53
C9orf85-205ENST00000479413 ADM5C9JUS6 153 aa18.36■□□□□ 0.53
C9orf85-205ENST00000479413 VIL1P09327 827 aaKnown RBP18.36■□□□□ 0.53
C9orf85-205ENST00000479413 ANKRD18AQ8IVF6 992 aa18.36■□□□□ 0.53
C9orf85-205ENST00000479413 C8orf58Q8NAV2 365 aa18.36■□□□□ 0.53
C9orf85-205ENST00000479413 SCN9AQ15858 1988 aa18.35■□□□□ 0.53
C9orf85-205ENST00000479413 XDHP47989 1333 aa18.35■□□□□ 0.53
C9orf85-205ENST00000479413 RGMBQ6NW40 437 aa18.35■□□□□ 0.53
C9orf85-205ENST00000479413 DLK2Q6UY11 383 aa18.35■□□□□ 0.53
C9orf85-205ENST00000479413 CCDC102AQ96A19 550 aa18.35■□□□□ 0.53
C9orf85-205ENST00000479413 CCDC85AQ96PX6 553 aaPredicted RBP18.35■□□□□ 0.53
C9orf85-205ENST00000479413 GGA3Q9NZ52 723 aa18.35■□□□□ 0.53
C9orf85-205ENST00000479413 POLR2AP24928 1970 aaKnown RBP18.34■□□□□ 0.53
C9orf85-205ENST00000479413 AGBL3Q8NEM8 1001 aa18.34■□□□□ 0.53
C9orf85-205ENST00000479413 JARID2Q92833 1246 aaPredicted RBP18.34■□□□□ 0.53
C9orf85-205ENST00000479413 CDC5LQ99459 802 aaKnown RBP18.34■□□□□ 0.53
C9orf85-205ENST00000479413 MAP3K2Q9Y2U5 619 aa18.34■□□□□ 0.53
C9orf85-205ENST00000479413 ZNF609O15014 1411 aa18.33■□□□□ 0.53
C9orf85-205ENST00000479413 ATP2B4P23634 1241 aa18.33■□□□□ 0.52
C9orf85-205ENST00000479413 NEXNQ0ZGT2 675 aa18.33■□□□□ 0.52
C9orf85-205ENST00000479413 RSBN1LQ6PCB5 846 aaPredicted RBP18.33■□□□□ 0.52
C9orf85-205ENST00000479413 POTEDQ86YR6 584 aa18.33■□□□□ 0.52
C9orf85-205ENST00000479413 STK31Q9BXU1 1019 aa18.33■□□□□ 0.52
C9orf85-205ENST00000479413 ZNF157P51786 506 aaPredicted RBP18.32■□□□□ 0.52
C9orf85-205ENST00000479413 CTSWP56202 376 aa18.32■□□□□ 0.52
C9orf85-205ENST00000479413 ZNF280AP59817 542 aaPredicted RBP18.32■□□□□ 0.52
C9orf85-205ENST00000479413 FAM161AQ3B820 660 aa18.32■□□□□ 0.52
C9orf85-205ENST00000479413 KSR2Q6VAB6 950 aa18.32■□□□□ 0.52
C9orf85-205ENST00000479413 PSME4Q14997 1843 aa18.32■□□□□ 0.52
C9orf85-205ENST00000479413 CASP8AP2Q9UKL3 1982 aa18.31■□□□□ 0.52
C9orf85-205ENST00000479413 USP17L8P0C7I0 530 aa18.31■□□□□ 0.52
C9orf85-205ENST00000479413 PODNQ7Z5L7 613 aa18.31■□□□□ 0.52
C9orf85-205ENST00000479413 ZIC5Q96T25 663 aa18.31■□□□□ 0.52
C9orf85-205ENST00000479413 MCOLN1Q9GZU1 580 aa18.31■□□□□ 0.52
C9orf85-205ENST00000479413 PI4KAP2A4QPH2 592 aa18.3■□□□□ 0.52
C9orf85-205ENST00000479413 FAM155AB1AL88 458 aaPredicted RBP18.3■□□□□ 0.52
C9orf85-205ENST00000479413 SCARF1Q14162 830 aa18.3■□□□□ 0.52
C9orf85-205ENST00000479413 ANGEL2Q5VTE6 544 aaKnown RBP18.3■□□□□ 0.52
C9orf85-205ENST00000479413 TSPYL6Q8N831 410 aa18.3■□□□□ 0.52
C9orf85-205ENST00000479413 PI4KAP1Q8N8J0 262 aa18.3■□□□□ 0.52
C9orf85-205ENST00000479413 CDCA5Q96FF9 252 aa18.3■□□□□ 0.52
C9orf85-205ENST00000479413 SAGE1Q9NXZ1 904 aa18.3■□□□□ 0.52
C9orf85-205ENST00000479413 MYH3P11055 1940 aa18.29■□□□□ 0.52
C9orf85-205ENST00000479413 ASTN2O75129 1339 aaPredicted RBP18.29■□□□□ 0.52
C9orf85-205ENST00000479413 USP17L3A6NCW0 530 aa18.29■□□□□ 0.52
C9orf85-205ENST00000479413 USP17L4A6NCW7 530 aa18.29■□□□□ 0.52
C9orf85-205ENST00000479413 MLLT1Q03111 559 aaPredicted RBP18.29■□□□□ 0.52
C9orf85-205ENST00000479413 DGKZQ13574 1117 aa18.29■□□□□ 0.52
C9orf85-205ENST00000479413 USP17L1Q7RTZ2 530 aa18.29■□□□□ 0.52
C9orf85-205ENST00000479413 MYOZ2Q9NPC6 264 aa18.29■□□□□ 0.52
C9orf85-205ENST00000479413 MED23Q9ULK4 1368 aa18.29■□□□□ 0.52
C9orf85-205ENST00000479413 IGKV5-2P06315 115 aa18.28■□□□□ 0.52
C9orf85-205ENST00000479413 KIF23Q02241 960 aaPredicted RBP18.28■□□□□ 0.52
C9orf85-205ENST00000479413 TTLL11Q8NHH1 800 aa18.28■□□□□ 0.52
C9orf85-205ENST00000479413 TSR2Q969E8 191 aaKnown RBP18.28■□□□□ 0.52
C9orf85-205ENST00000479413 BSDC1Q9NW68 430 aaPredicted RBP18.28■□□□□ 0.52
C9orf85-205ENST00000479413 SPEF2Q9C093 1822 aa18.28■□□□□ 0.52
C9orf85-205ENST00000479413 PITPNM2Q9BZ72 1349 aa18.27■□□□□ 0.52
C9orf85-205ENST00000479413 SLC10A3P09131 477 aa18.27■□□□□ 0.52
C9orf85-205ENST00000479413 FKBP1BP68106 108 aa18.27■□□□□ 0.52
C9orf85-205ENST00000479413 GMLQ99445 158 aa18.27■□□□□ 0.52
C9orf85-205ENST00000479413 GREM2Q9H772 168 aa18.27■□□□□ 0.52
C9orf85-205ENST00000479413 CWF19L2Q2TBE0 894 aaKnown RBP18.26■□□□□ 0.51
C9orf85-205ENST00000479413 TWISTNBQ3B726 338 aaPredicted RBP18.26■□□□□ 0.51
C9orf85-205ENST00000479413 REM2Q8IYK8 340 aaPredicted RBP18.26■□□□□ 0.51
C9orf85-205ENST00000479413 OGFOD1Q8N543 542 aa18.26■□□□□ 0.51
C9orf85-205ENST00000479413 MINPP1Q9UNW1 487 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms