RNA–Protein interactions for RNA: ENST00000479362.1

CDK11A-216, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-216ENST00000479362 HPS5Q9UPZ3 1129 aa13.14□□□□□ -0.31
CDK11A-216ENST00000479362 GJA3Q9Y6H8 435 aa13.14□□□□□ -0.31
CDK11A-216ENST00000479362 MAP3K15Q6ZN16 1313 aa13.13□□□□□ -0.31
CDK11A-216ENST00000479362 PI4KAP2A4QPH2 592 aa13.13□□□□□ -0.31
CDK11A-216ENST00000479362 F6X3S4 739 aa13.13□□□□□ -0.31
CDK11A-216ENST00000479362 RLBP1P12271 317 aa13.13□□□□□ -0.31
CDK11A-216ENST00000479362 ST5P78524 1137 aa13.13□□□□□ -0.31
CDK11A-216ENST00000479362 PDE3AQ14432 1141 aa13.13□□□□□ -0.31
CDK11A-216ENST00000479362 C20orf194Q5TEA3 1177 aa13.13□□□□□ -0.31
CDK11A-216ENST00000479362 ANKRD13DQ6ZTN6 518 aa13.13□□□□□ -0.31
CDK11A-216ENST00000479362 RIC3Q7Z5B4 369 aa13.13□□□□□ -0.31
CDK11A-216ENST00000479362 CTU1Q7Z7A3 348 aaKnown RBP13.13□□□□□ -0.31
CDK11A-216ENST00000479362 RTKN2Q8IZC4 609 aa13.13□□□□□ -0.31
CDK11A-216ENST00000479362 SYNE4Q8N205 404 aa13.13□□□□□ -0.31
CDK11A-216ENST00000479362 PI4KAP1Q8N8J0 262 aa13.13□□□□□ -0.31
CDK11A-216ENST00000479362 PLBD2Q8NHP8 589 aa13.13□□□□□ -0.31
CDK11A-216ENST00000479362 PANK1Q8TE04 598 aa13.13□□□□□ -0.31
CDK11A-216ENST00000479362 ZBTB3Q9H5J0 574 aa13.13□□□□□ -0.31
CDK11A-216ENST00000479362 MAP3K2Q9Y2U5 619 aa13.13□□□□□ -0.31
CDK11A-216ENST00000479362 IRX6P78412 446 aaPredicted RBP13.12□□□□□ -0.31
CDK11A-216ENST00000479362 SLC4A10Q6U841 1118 aa13.12□□□□□ -0.31
CDK11A-216ENST00000479362 GLIS2Q9BZE0 524 aaPredicted RBP13.12□□□□□ -0.31
CDK11A-216ENST00000479362 FAM155AB1AL88 458 aaPredicted RBP13.11□□□□□ -0.31
CDK11A-216ENST00000479362 NPR1P16066 1061 aa13.11□□□□□ -0.31
CDK11A-216ENST00000479362 ITPRIPQ8IWB1 547 aa13.11□□□□□ -0.31
CDK11A-216ENST00000479362 TMEM57Q8N5G2 664 aa13.11□□□□□ -0.31
CDK11A-216ENST00000479362 JDP2Q8WYK2 163 aa13.11□□□□□ -0.31
CDK11A-216ENST00000479362 TBC1D2BQ9UPU7 963 aa13.11□□□□□ -0.31
CDK11A-216ENST00000479362 RANBP2P49792 3224 aaKnown RBP13.11□□□□□ -0.31
CDK11A-216ENST00000479362 KLRG2A4D1S0 409 aaPredicted RBP13.1□□□□□ -0.31
CDK11A-216ENST00000479362 ERVV-1B6SEH8 477 aa13.1□□□□□ -0.31
CDK11A-216ENST00000479362 DLL1O00548 723 aa13.1□□□□□ -0.31
CDK11A-216ENST00000479362 CAMTA2O94983 1202 aa13.1□□□□□ -0.31
CDK11A-216ENST00000479362 CCT4P50991 539 aaKnown RBP13.1□□□□□ -0.31
CDK11A-216ENST00000479362 EIF6P56537 245 aaKnown RBP13.1□□□□□ -0.31
CDK11A-216ENST00000479362 NEXNQ0ZGT2 675 aa13.1□□□□□ -0.31
CDK11A-216ENST00000479362 SETDB2Q96T68 719 aa13.1□□□□□ -0.31
CDK11A-216ENST00000479362 PSMD1Q99460 953 aa13.1□□□□□ -0.31
CDK11A-216ENST00000479362 METTL22Q9BUU2 404 aaPredicted RBP13.1□□□□□ -0.31
CDK11A-216ENST00000479362 RNF186Q9NXI6 227 aa13.1□□□□□ -0.31
CDK11A-216ENST00000479362 COG6Q9Y2V7 657 aa13.1□□□□□ -0.31
CDK11A-216ENST00000479362 NPHP1O15259 732 aa13.09□□□□□ -0.31
CDK11A-216ENST00000479362 TRPA1O75762 1119 aa13.09□□□□□ -0.31
CDK11A-216ENST00000479362 MVPQ14764 893 aaKnown RBP13.09□□□□□ -0.31
CDK11A-216ENST00000479362 INTS3Q68E01 1043 aaKnown RBP13.09□□□□□ -0.31
CDK11A-216ENST00000479362 GIGYF2Q6Y7W6 1299 aaKnown RBP13.09□□□□□ -0.31
CDK11A-216ENST00000479362 MYD88Q99836 296 aa13.09□□□□□ -0.31
CDK11A-216ENST00000479362 SRCIN1Q9C0H9 1055 aa13.09□□□□□ -0.31
CDK11A-216ENST00000479362 ZNF408Q9H9D4 720 aa13.09□□□□□ -0.31
CDK11A-216ENST00000479362 ZNF652Q9Y2D9 606 aa13.09□□□□□ -0.31
CDK11A-216ENST00000479362 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
CDK11A-216ENST00000479362 HLFQ16534 295 aa13.08□□□□□ -0.32
CDK11A-216ENST00000479362 HSP90AB3PQ58FF7 597 aa13.08□□□□□ -0.32
CDK11A-216ENST00000479362 BEND3Q5T5X7 828 aa13.08□□□□□ -0.32
CDK11A-216ENST00000479362 LINS1Q8NG48 757 aa13.08□□□□□ -0.32
CDK11A-216ENST00000479362 CRBNQ96SW2 442 aa13.08□□□□□ -0.32
CDK11A-216ENST00000479362 ADARB2Q9NS39 739 aaKnown RBP13.08□□□□□ -0.32
CDK11A-216ENST00000479362 GPRC5DQ9NZD1 345 aa13.08□□□□□ -0.32
CDK11A-216ENST00000479362 PGAP2Q9UHJ9 254 aa13.08□□□□□ -0.32
CDK11A-216ENST00000479362 TRIOBPQ9H2D6 2365 aa13.08□□□□□ -0.32
CDK11A-216ENST00000479362 PITPNM1O00562 1244 aa13.07□□□□□ -0.32
CDK11A-216ENST00000479362 RGL2O15211 777 aa13.07□□□□□ -0.32
CDK11A-216ENST00000479362 ALDH1L1O75891 902 aa13.07□□□□□ -0.32
CDK11A-216ENST00000479362 HUNKP57058 714 aa13.07□□□□□ -0.32
CDK11A-216ENST00000479362 DDX19BQ9UMR2 479 aa13.07□□□□□ -0.32
CDK11A-216ENST00000479362 NEURL1BA8MQ27 555 aa13.06□□□□□ -0.32
CDK11A-216ENST00000479362 ATP5J2-PTCD1G3V325 749 aa13.06□□□□□ -0.32
CDK11A-216ENST00000479362 IGKV5-2P06315 115 aa13.06□□□□□ -0.32
CDK11A-216ENST00000479362 KIF23Q02241 960 aaPredicted RBP13.06□□□□□ -0.32
CDK11A-216ENST00000479362 TCIRG1Q13488 830 aa13.06□□□□□ -0.32
CDK11A-216ENST00000479362 CWF19L2Q2TBE0 894 aaKnown RBP13.06□□□□□ -0.32
CDK11A-216ENST00000479362 CLEC4GQ6UXB4 293 aa13.06□□□□□ -0.32
CDK11A-216ENST00000479362 IBTKQ9P2D0 1353 aaPredicted RBP13.06□□□□□ -0.32
CDK11A-216ENST00000479362 LAMB2P55268 1798 aa13.05□□□□□ -0.32
CDK11A-216ENST00000479362 GPTP24298 496 aa13.05□□□□□ -0.32
CDK11A-216ENST00000479362 NBPF5PQ86XG9 351 aaPredicted RBP13.05□□□□□ -0.32
CDK11A-216ENST00000479362 EXOC6Q8TAG9 804 aa13.05□□□□□ -0.32
CDK11A-216ENST00000479362 ISCA1Q9BUE6 129 aa13.05□□□□□ -0.32
CDK11A-216ENST00000479362 CEP290O15078 2479 aa13.05□□□□□ -0.32
CDK11A-216ENST00000479362 HIRAP54198 1017 aaPredicted RBP13.04□□□□□ -0.32
CDK11A-216ENST00000479362 PKN2Q16513 984 aaKnown RBP13.04□□□□□ -0.32
CDK11A-216ENST00000479362 RGMBQ6NW40 437 aa13.04□□□□□ -0.32
CDK11A-216ENST00000479362 DLK2Q6UY11 383 aa13.04□□□□□ -0.32
CDK11A-216ENST00000479362 SLC51AQ86UW1 340 aa13.04□□□□□ -0.32
CDK11A-216ENST00000479362 ZNF34Q8IZ26 560 aa13.04□□□□□ -0.32
CDK11A-216ENST00000479362 CHMP4BQ9H444 224 aaKnown RBP13.04□□□□□ -0.32
CDK11A-216ENST00000479362 CWC25Q9NXE8 425 aaPredicted RBP13.04□□□□□ -0.32
CDK11A-216ENST00000479362 RBBP6Q7Z6E9 1792 aaKnown RBP13.04□□□□□ -0.32
CDK11A-216ENST00000479362 MYH3P11055 1940 aa13.03□□□□□ -0.32
CDK11A-216ENST00000479362 POLR2AP24928 1970 aaKnown RBP13.03□□□□□ -0.32
CDK11A-216ENST00000479362 TRIM28Q13263 835 aaKnown RBP13.03□□□□□ -0.32
CDK11A-216ENST00000479362 GCKRQ14397 625 aa13.03□□□□□ -0.32
CDK11A-216ENST00000479362 PARP10Q53GL7 1025 aa13.03□□□□□ -0.32
CDK11A-216ENST00000479362 LARGE2Q8N3Y3 721 aa13.03□□□□□ -0.32
CDK11A-216ENST00000479362 CCDC191Q8NCU4 936 aa13.03□□□□□ -0.32
CDK11A-216ENST00000479362 MEIS3Q99687 375 aa13.03□□□□□ -0.32
CDK11A-216ENST00000479362 NIP7Q9Y221 180 aaKnown RBP eCLIP13.03□□□□□ -0.32
CDK11A-216ENST00000479362 UBN2Q6ZU65 1347 aa13.03□□□□□ -0.32
CDK11A-216ENST00000479362 GNAI3P08754 354 aa13.02□□□□□ -0.33
CDK11A-216ENST00000479362 CDC37L1Q7L3B6 337 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms