RNA–Protein interactions for RNA: ENST00000479295.1

PTPN18-210, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-210ENST00000479295 SCN4AP35499 1836 aa12.27□□□□□ -0.44
PTPN18-210ENST00000479295 ANKRD18BA2A2Z9 1011 aa12.27□□□□□ -0.45
PTPN18-210ENST00000479295 IPO8O15397 1037 aaKnown RBP12.27□□□□□ -0.45
PTPN18-210ENST00000479295 TRIM27P14373 513 aa12.27□□□□□ -0.45
PTPN18-210ENST00000479295 ATP2B4P23634 1241 aa12.27□□□□□ -0.45
PTPN18-210ENST00000479295 WASHC4Q2M389 1173 aa12.27□□□□□ -0.45
PTPN18-210ENST00000479295 ATF7IPQ6VMQ6 1270 aa12.27□□□□□ -0.45
PTPN18-210ENST00000479295 NIM1KQ8IY84 436 aa12.27□□□□□ -0.45
PTPN18-210ENST00000479295 RBM46Q8TBY0 533 aaKnown RBP12.27□□□□□ -0.45
PTPN18-210ENST00000479295 EYA3Q99504 573 aa12.27□□□□□ -0.45
PTPN18-210ENST00000479295 IRS2Q9Y4H2 1338 aa12.27□□□□□ -0.45
PTPN18-210ENST00000479295 ZNF609O15014 1411 aa12.27□□□□□ -0.45
PTPN18-210ENST00000479295 YDJCA8MPS7 323 aa12.26□□□□□ -0.45
PTPN18-210ENST00000479295 IGHMBP2P38935 993 aaKnown RBP12.26□□□□□ -0.45
PTPN18-210ENST00000479295 EIF6P56537 245 aaKnown RBP12.26□□□□□ -0.45
PTPN18-210ENST00000479295 CXCL9Q07325 125 aa12.26□□□□□ -0.45
PTPN18-210ENST00000479295 IFIT5Q13325 482 aaKnown RBP12.26□□□□□ -0.45
PTPN18-210ENST00000479295 ANKRD2Q9GZV1 360 aa12.26□□□□□ -0.45
PTPN18-210ENST00000479295 GGA1Q9UJY5 639 aa12.26□□□□□ -0.45
PTPN18-210ENST00000479295 LEMD3Q9Y2U8 911 aa12.26□□□□□ -0.45
PTPN18-210ENST00000479295 MED23Q9ULK4 1368 aa12.26□□□□□ -0.45
PTPN18-210ENST00000479295 ADAMTSL1Q8N6G6 1762 aa12.25□□□□□ -0.45
PTPN18-210ENST00000479295 C15orf52Q6ZUT6 534 aaKnown RBP12.25□□□□□ -0.45
PTPN18-210ENST00000479295 BICC1Q9H694 974 aaKnown RBP12.25□□□□□ -0.45
PTPN18-210ENST00000479295 A0A1B0GUL6 1792 aa12.25□□□□□ -0.45
PTPN18-210ENST00000479295 IQCA1LA6NCM1 817 aa12.24□□□□□ -0.45
PTPN18-210ENST00000479295 C6orf229H3BNL8 230 aa12.24□□□□□ -0.45
PTPN18-210ENST00000479295 UFL1O94874 794 aa12.24□□□□□ -0.45
PTPN18-210ENST00000479295 RFX5P48382 616 aaPredicted RBP12.24□□□□□ -0.45
PTPN18-210ENST00000479295 SCNN1DP51172 638 aa12.24□□□□□ -0.45
PTPN18-210ENST00000479295 FSTL1Q12841 308 aa12.24□□□□□ -0.45
PTPN18-210ENST00000479295 CCDC57Q2TAC2 916 aa12.24□□□□□ -0.45
PTPN18-210ENST00000479295 ZKSCAN2Q63HK3 967 aa12.24□□□□□ -0.45
PTPN18-210ENST00000479295 MPHOSPH8Q99549 860 aa12.24□□□□□ -0.45
PTPN18-210ENST00000479295 TAF1DQ9H5J8 278 aaPredicted RBP12.24□□□□□ -0.45
PTPN18-210ENST00000479295 ANKIB1Q9P2G1 1089 aa12.24□□□□□ -0.45
PTPN18-210ENST00000479295 TNNQ9UQP3 1299 aa12.24□□□□□ -0.45
PTPN18-210ENST00000479295 SPEF2Q9C093 1822 aa12.23□□□□□ -0.45
PTPN18-210ENST00000479295 WTIPA6NIX2 430 aaPredicted RBP12.23□□□□□ -0.45
PTPN18-210ENST00000479295 CHRNDQ07001 517 aa12.23□□□□□ -0.45
PTPN18-210ENST00000479295 MTX1Q13505 466 aa12.23□□□□□ -0.45
PTPN18-210ENST00000479295 PODNQ7Z5L7 613 aa12.23□□□□□ -0.45
PTPN18-210ENST00000479295 ZC3H12CQ9C0D7 883 aaKnown RBP12.23□□□□□ -0.45
PTPN18-210ENST00000479295 HDAC5Q9UQL6 1122 aa12.23□□□□□ -0.45
PTPN18-210ENST00000479295 RIPOR2Q9Y4F9 1068 aa12.23□□□□□ -0.45
PTPN18-210ENST00000479295 ZNF804BA4D1E1 1349 aa12.22□□□□□ -0.45
PTPN18-210ENST00000479295 ECE2O60344 883 aa12.22□□□□□ -0.45
PTPN18-210ENST00000479295 CIAPIN1Q6FI81 312 aa12.22□□□□□ -0.45
PTPN18-210ENST00000479295 ZNF594Q96JF6 807 aaPredicted RBP12.22□□□□□ -0.45
PTPN18-210ENST00000479295 GPR101Q96P66 508 aaPredicted RBP12.22□□□□□ -0.45
PTPN18-210ENST00000479295 MEIS3Q99687 375 aa12.22□□□□□ -0.45
PTPN18-210ENST00000479295 HACL1Q9UJ83 578 aa12.22□□□□□ -0.45
PTPN18-210ENST00000479295 FBXO3Q9UK99 471 aa12.22□□□□□ -0.45
PTPN18-210ENST00000479295 PSME4Q14997 1843 aa12.22□□□□□ -0.45
PTPN18-210ENST00000479295 SCN9AQ15858 1988 aa12.21□□□□□ -0.45
PTPN18-210ENST00000479295 ZNF646O15015 1829 aaPredicted RBP12.21□□□□□ -0.45
PTPN18-210ENST00000479295 RIMBP2O15034 1052 aa12.21□□□□□ -0.45
PTPN18-210ENST00000479295 VIL1P09327 827 aaKnown RBP12.21□□□□□ -0.45
PTPN18-210ENST00000479295 UBTFL1P0CB47 393 aaPredicted RBP12.21□□□□□ -0.45
PTPN18-210ENST00000479295 PTPN12Q05209 780 aaKnown RBP12.21□□□□□ -0.45
PTPN18-210ENST00000479295 TNIP1Q15025 636 aa12.21□□□□□ -0.45
PTPN18-210ENST00000479295 LDHAL6AQ6ZMR3 332 aa12.21□□□□□ -0.45
PTPN18-210ENST00000479295 TXNRD3Q86VQ6 643 aa12.21□□□□□ -0.45
PTPN18-210ENST00000479295 VGLL2Q8N8G2 317 aa12.21□□□□□ -0.45
PTPN18-210ENST00000479295 DPF2Q92785 391 aa12.21□□□□□ -0.45
PTPN18-210ENST00000479295 DBNDD1Q9H9R9 158 aa12.21□□□□□ -0.45
PTPN18-210ENST00000479295 GPRC5DQ9NZD1 345 aa12.21□□□□□ -0.45
PTPN18-210ENST00000479295 MROH5Q6ZUA9 1318 aa12.2□□□□□ -0.46
PTPN18-210ENST00000479295 GNAI3P08754 354 aa12.2□□□□□ -0.46
PTPN18-210ENST00000479295 RPS12P25398 132 aaKnown RBP12.2□□□□□ -0.46
PTPN18-210ENST00000479295 EPHX2P34913 555 aa12.2□□□□□ -0.46
PTPN18-210ENST00000479295 UBE4AQ14139 1066 aa12.2□□□□□ -0.46
PTPN18-210ENST00000479295 PNMA8AQ86V59 439 aaPredicted RBP12.2□□□□□ -0.46
PTPN18-210ENST00000479295 TMEM57Q8N5G2 664 aa12.2□□□□□ -0.46
PTPN18-210ENST00000479295 SMC1BQ8NDV3 1235 aa12.2□□□□□ -0.46
PTPN18-210ENST00000479295 FRAT1Q92837 279 aaPredicted RBP12.2□□□□□ -0.46
PTPN18-210ENST00000479295 GMLQ99445 158 aa12.2□□□□□ -0.46
PTPN18-210ENST00000479295 PUS3Q9BZE2 481 aaKnown RBP12.2□□□□□ -0.46
PTPN18-210ENST00000479295 COA1Q9GZY4 146 aa12.2□□□□□ -0.46
PTPN18-210ENST00000479295 KCNQ5Q9NR82 932 aa12.2□□□□□ -0.46
PTPN18-210ENST00000479295 CHMP3Q9Y3E7 222 aa12.2□□□□□ -0.46
PTPN18-210ENST00000479295 PSMD14O00487 310 aa12.19□□□□□ -0.46
PTPN18-210ENST00000479295 RAD17O75943 681 aa12.19□□□□□ -0.46
PTPN18-210ENST00000479295 RLBP1P12271 317 aa12.19□□□□□ -0.46
PTPN18-210ENST00000479295 HSPA6P17066 643 aa12.19□□□□□ -0.46
PTPN18-210ENST00000479295 EPS15P42566 896 aa12.19□□□□□ -0.46
PTPN18-210ENST00000479295 GMPSP49915 693 aaPredicted RBP12.19□□□□□ -0.46
PTPN18-210ENST00000479295 DOK7Q18PE1 504 aa12.19□□□□□ -0.46
PTPN18-210ENST00000479295 USP50Q70EL3 339 aaPredicted RBP12.19□□□□□ -0.46
PTPN18-210ENST00000479295 LDHDQ86WU2 507 aa12.19□□□□□ -0.46
PTPN18-210ENST00000479295 C16orf71Q8IYS4 520 aaPredicted RBP12.19□□□□□ -0.46
PTPN18-210ENST00000479295 COPRSQ9NQ92 184 aa12.19□□□□□ -0.46
PTPN18-210ENST00000479295 PGAP2Q9UHJ9 254 aa12.19□□□□□ -0.46
PTPN18-210ENST00000479295 LRRFIP2Q9Y608 721 aaKnown RBP12.19□□□□□ -0.46
PTPN18-210ENST00000479295 GJA3Q9Y6H8 435 aa12.19□□□□□ -0.46
PTPN18-210ENST00000479295 EYA2O00167 538 aa12.18□□□□□ -0.46
PTPN18-210ENST00000479295 ZBTB7BO15156 539 aaPredicted RBP12.18□□□□□ -0.46
PTPN18-210ENST00000479295 ZBTB22O15209 634 aa12.18□□□□□ -0.46
PTPN18-210ENST00000479295 TAF5LO75529 589 aa12.18□□□□□ -0.46
PTPN18-210ENST00000479295 CIAO1O76071 339 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms