RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 SEC31BQ9NQW1 1179 aa17.1■□□□□ 0.33
VCL-205ENST00000478896 ANKIB1Q9P2G1 1089 aa17.1■□□□□ 0.33
VCL-205ENST00000478896 UFL1O94874 794 aa17.09■□□□□ 0.33
VCL-205ENST00000478896 RPS12P25398 132 aaKnown RBP17.09■□□□□ 0.33
VCL-205ENST00000478896 MAP2K2P36507 400 aa17.09■□□□□ 0.33
VCL-205ENST00000478896 CCDC30Q5VVM6 783 aa17.09■□□□□ 0.33
VCL-205ENST00000478896 CCDC191Q8NCU4 936 aa17.09■□□□□ 0.33
VCL-205ENST00000478896 CCDC85AQ96PX6 553 aaPredicted RBP17.09■□□□□ 0.33
VCL-205ENST00000478896 ZC3H12CQ9C0D7 883 aaKnown RBP17.09■□□□□ 0.33
VCL-205ENST00000478896 CWC25Q9NXE8 425 aaPredicted RBP17.09■□□□□ 0.33
VCL-205ENST00000478896 PDE8AO60658 829 aa17.08■□□□□ 0.32
VCL-205ENST00000478896 PCCAP05165 728 aaPredicted RBP17.08■□□□□ 0.32
VCL-205ENST00000478896 RBM26Q5T8P6 1007 aaKnown RBP17.08■□□□□ 0.32
VCL-205ENST00000478896 USP48Q86UV5 1035 aa17.08■□□□□ 0.32
VCL-205ENST00000478896 HHIPL1Q96JK4 782 aa17.08■□□□□ 0.32
VCL-205ENST00000478896 CHMP4AQ9BY43 222 aa17.08■□□□□ 0.32
VCL-205ENST00000478896 TSKSQ9UJT2 592 aa17.08■□□□□ 0.32
VCL-205ENST00000478896 GGA1Q9UJY5 639 aa17.08■□□□□ 0.32
VCL-205ENST00000478896 SCN9AQ15858 1988 aa17.08■□□□□ 0.32
VCL-205ENST00000478896 RTL9Q8NET4 1388 aa17.07■□□□□ 0.32
VCL-205ENST00000478896 KIF4BQ2VIQ3 1234 aa17.07■□□□□ 0.32
VCL-205ENST00000478896 KRT26Q7Z3Y9 468 aa17.07■□□□□ 0.32
VCL-205ENST00000478896 C8orf58Q8NAV2 365 aa17.07■□□□□ 0.32
VCL-205ENST00000478896 JARID2Q92833 1246 aaPredicted RBP17.07■□□□□ 0.32
VCL-205ENST00000478896 DCPSQ96C86 337 aaKnown RBP17.07■□□□□ 0.32
VCL-205ENST00000478896 METTL22Q9BUU2 404 aaPredicted RBP17.07■□□□□ 0.32
VCL-205ENST00000478896 POLR2AP24928 1970 aaKnown RBP17.07■□□□□ 0.32
VCL-205ENST00000478896 MYH3P11055 1940 aa17.07■□□□□ 0.32
VCL-205ENST00000478896 SPEF2Q9C093 1822 aa17.07■□□□□ 0.32
VCL-205ENST00000478896 HUNKP57058 714 aa17.06■□□□□ 0.32
VCL-205ENST00000478896 ANKRD18AQ8IVF6 992 aa17.06■□□□□ 0.32
VCL-205ENST00000478896 ABHD8Q96I13 439 aa17.06■□□□□ 0.32
VCL-205ENST00000478896 KCNQ5Q9NR82 932 aa17.06■□□□□ 0.32
VCL-205ENST00000478896 PODXL2Q9NZ53 605 aa17.06■□□□□ 0.32
VCL-205ENST00000478896 CA12O43570 354 aa17.05■□□□□ 0.32
VCL-205ENST00000478896 EGFRP00533 1210 aa17.05■□□□□ 0.32
VCL-205ENST00000478896 BRPF1P55201 1214 aaPredicted RBP17.05■□□□□ 0.32
VCL-205ENST00000478896 STK31Q9BXU1 1019 aa17.05■□□□□ 0.32
VCL-205ENST00000478896 MAP3K2Q9Y2U5 619 aa17.05■□□□□ 0.32
VCL-205ENST00000478896 PSME4Q14997 1843 aa17.05■□□□□ 0.32
VCL-205ENST00000478896 ADM5C9JUS6 153 aa17.04■□□□□ 0.32
VCL-205ENST00000478896 NEXNQ0ZGT2 675 aa17.04■□□□□ 0.32
VCL-205ENST00000478896 DLK2Q6UY11 383 aa17.04■□□□□ 0.32
VCL-205ENST00000478896 GGA3Q9NZ52 723 aa17.04■□□□□ 0.32
VCL-205ENST00000478896 XDHP47989 1333 aa17.03■□□□□ 0.32
VCL-205ENST00000478896 VIL1P09327 827 aaKnown RBP17.03■□□□□ 0.32
VCL-205ENST00000478896 CTSWP56202 376 aa17.03■□□□□ 0.32
VCL-205ENST00000478896 NOGQ13253 232 aa17.03■□□□□ 0.32
VCL-205ENST00000478896 SULF1Q8IWU6 871 aa17.03■□□□□ 0.32
VCL-205ENST00000478896 TSPYL6Q8N831 410 aa17.03■□□□□ 0.32
VCL-205ENST00000478896 C2orf69Q8N8R5 385 aa17.03■□□□□ 0.32
VCL-205ENST00000478896 TSR2Q969E8 191 aaKnown RBP17.03■□□□□ 0.32
VCL-205ENST00000478896 CDC5LQ99459 802 aaKnown RBP17.03■□□□□ 0.32
VCL-205ENST00000478896 GBA2Q9HCG7 927 aaPredicted RBP17.03■□□□□ 0.32
VCL-205ENST00000478896 PI4KAP2A4QPH2 592 aa17.02■□□□□ 0.32
VCL-205ENST00000478896 KSR2Q6VAB6 950 aa17.02■□□□□ 0.32
VCL-205ENST00000478896 PI4KAP1Q8N8J0 262 aa17.02■□□□□ 0.32
VCL-205ENST00000478896 ATP2B4P23634 1241 aa17.01■□□□□ 0.31
VCL-205ENST00000478896 RGMBQ6NW40 437 aa17.01■□□□□ 0.31
VCL-205ENST00000478896 CASP8AP2Q9UKL3 1982 aa17■□□□□ 0.31
VCL-205ENST00000478896 CCDC85CA6NKD9 419 aa17■□□□□ 0.31
VCL-205ENST00000478896 RSBN1LQ6PCB5 846 aaPredicted RBP17■□□□□ 0.31
VCL-205ENST00000478896 AGBL3Q8NEM8 1001 aa17■□□□□ 0.31
VCL-205ENST00000478896 ZNF609O15014 1411 aa16.99■□□□□ 0.31
VCL-205ENST00000478896 IGKV5-2P06315 115 aa16.99■□□□□ 0.31
VCL-205ENST00000478896 CWF19L2Q2TBE0 894 aaKnown RBP16.99■□□□□ 0.31
VCL-205ENST00000478896 TWISTNBQ3B726 338 aaPredicted RBP16.99■□□□□ 0.31
VCL-205ENST00000478896 ZNF157P51786 506 aaPredicted RBP16.98■□□□□ 0.31
VCL-205ENST00000478896 ANGEL2Q5VTE6 544 aaKnown RBP16.98■□□□□ 0.31
VCL-205ENST00000478896 PODNQ7Z5L7 613 aa16.98■□□□□ 0.31
VCL-205ENST00000478896 FBXW7Q969H0 707 aa16.98■□□□□ 0.31
VCL-205ENST00000478896 CCDC102AQ96A19 550 aa16.98■□□□□ 0.31
VCL-205ENST00000478896 ZIC5Q96T25 663 aa16.98■□□□□ 0.31
VCL-205ENST00000478896 GREM2Q9H772 168 aa16.98■□□□□ 0.31
VCL-205ENST00000478896 MED23Q9ULK4 1368 aa16.98■□□□□ 0.31
VCL-205ENST00000478896 ASTN2O75129 1339 aaPredicted RBP16.97■□□□□ 0.31
VCL-205ENST00000478896 USP17L3A6NCW0 530 aa16.97■□□□□ 0.31
VCL-205ENST00000478896 USP17L4A6NCW7 530 aa16.97■□□□□ 0.31
VCL-205ENST00000478896 NEURL1BA8MQ27 555 aa16.97■□□□□ 0.31
VCL-205ENST00000478896 USP17L8P0C7I0 530 aa16.97■□□□□ 0.31
VCL-205ENST00000478896 IGHMBP2P38935 993 aaKnown RBP16.97■□□□□ 0.31
VCL-205ENST00000478896 SCARF1Q14162 830 aa16.97■□□□□ 0.31
VCL-205ENST00000478896 CCDC27Q2M243 656 aa16.97■□□□□ 0.31
VCL-205ENST00000478896 USP17L1Q7RTZ2 530 aa16.97■□□□□ 0.31
VCL-205ENST00000478896 UBE3BQ7Z3V4 1068 aa16.97■□□□□ 0.31
VCL-205ENST00000478896 WWC1Q8IX03 1113 aa16.97■□□□□ 0.31
VCL-205ENST00000478896 TTLL11Q8NHH1 800 aa16.97■□□□□ 0.31
VCL-205ENST00000478896 CDCA5Q96FF9 252 aa16.97■□□□□ 0.31
VCL-205ENST00000478896 MYOZ2Q9NPC6 264 aa16.97■□□□□ 0.31
VCL-205ENST00000478896 BSDC1Q9NW68 430 aaPredicted RBP16.97■□□□□ 0.31
VCL-205ENST00000478896 AKAP11Q9UKA4 1901 aa16.97■□□□□ 0.31
VCL-205ENST00000478896 FAM155AB1AL88 458 aaPredicted RBP16.96■□□□□ 0.31
VCL-205ENST00000478896 SLC4A2P04920 1241 aa16.96■□□□□ 0.31
VCL-205ENST00000478896 ZNF280AP59817 542 aaPredicted RBP16.96■□□□□ 0.31
VCL-205ENST00000478896 FAM161AQ3B820 660 aa16.96■□□□□ 0.31
VCL-205ENST00000478896 CCDC184Q52MB2 194 aa16.96■□□□□ 0.31
VCL-205ENST00000478896 MINPP1Q9UNW1 487 aa16.96■□□□□ 0.31
VCL-205ENST00000478896 PAPPA2Q9BXP8 1791 aa16.95■□□□□ 0.3
VCL-205ENST00000478896 CCT4P50991 539 aaKnown RBP16.95■□□□□ 0.3
VCL-205ENST00000478896 G2E3Q7L622 706 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms