RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 CENPJQ9HC77 1338 aaPredicted RBP8.94□□□□□ -0.98
HOXB3-209ENST00000478644 SLURP2P0DP57 97 aa8.93□□□□□ -0.98
HOXB3-209ENST00000478644 RHOQP17081 205 aa8.93□□□□□ -0.98
HOXB3-209ENST00000478644 BAG6P46379 1132 aa8.93□□□□□ -0.98
HOXB3-209ENST00000478644 POU4F2Q12837 409 aa8.93□□□□□ -0.98
HOXB3-209ENST00000478644 SEMA3FQ13275 785 aa8.93□□□□□ -0.98
HOXB3-209ENST00000478644 RNFT1Q5M7Z0 435 aa8.93□□□□□ -0.98
HOXB3-209ENST00000478644 TRIM22Q8IYM9 498 aa8.93□□□□□ -0.98
HOXB3-209ENST00000478644 CNTNAP3BQ96NU0 1288 aa8.93□□□□□ -0.98
HOXB3-209ENST00000478644 CNTNAP3Q9BZ76 1288 aa8.93□□□□□ -0.98
HOXB3-209ENST00000478644 FHDC1Q9C0D6 1143 aaPredicted RBP8.93□□□□□ -0.98
HOXB3-209ENST00000478644 ALG2Q9H553 416 aa8.93□□□□□ -0.98
HOXB3-209ENST00000478644 EVC2Q86UK5 1308 aa8.93□□□□□ -0.98
HOXB3-209ENST00000478644 TRPM3Q9HCF6 1732 aaPredicted RBP8.92□□□□□ -0.98
HOXB3-209ENST00000478644 ALS2Q96Q42 1657 aa8.92□□□□□ -0.98
HOXB3-209ENST00000478644 ACEP12821 1306 aa8.92□□□□□ -0.98
HOXB3-209ENST00000478644 SPATA31A5Q5VU36 1347 aa8.92□□□□□ -0.98
HOXB3-209ENST00000478644 SPATA31A7Q8IWB4 1347 aa8.92□□□□□ -0.98
HOXB3-209ENST00000478644 PRR36Q9H6K5 1346 aa8.92□□□□□ -0.98
HOXB3-209ENST00000478644 SRPK2P78362 688 aaKnown RBP8.92□□□□□ -0.98
HOXB3-209ENST00000478644 ABTB2Q8N961 1025 aa8.92□□□□□ -0.98
HOXB3-209ENST00000478644 ARHGEF28Q8N1W1 1705 aaKnown RBP8.91□□□□□ -0.98
HOXB3-209ENST00000478644 GLI3P10071 1580 aa8.91□□□□□ -0.98
HOXB3-209ENST00000478644 CPDO75976 1380 aa8.91□□□□□ -0.98
HOXB3-209ENST00000478644 CDC14CA4D256 554 aa8.91□□□□□ -0.98
HOXB3-209ENST00000478644 EVA1CP58658 441 aa8.91□□□□□ -0.98
HOXB3-209ENST00000478644 FAM196AQ6ZSG2 479 aa8.91□□□□□ -0.98
HOXB3-209ENST00000478644 TAS1R3Q7RTX0 852 aa8.91□□□□□ -0.98
HOXB3-209ENST00000478644 PLPP7Q8NBV4 271 aa8.91□□□□□ -0.98
HOXB3-209ENST00000478644 RAB6BQ9NRW1 208 aa8.91□□□□□ -0.98
HOXB3-209ENST00000478644 PLCH1Q4KWH8 1693 aa8.91□□□□□ -0.98
HOXB3-209ENST00000478644 DBN1Q16643 649 aa8.9□□□□□ -0.98
HOXB3-209ENST00000478644 NFATC2IPQ8NCF5 419 aa8.9□□□□□ -0.98
HOXB3-209ENST00000478644 ZNF837Q96EG3 531 aaPredicted RBP8.9□□□□□ -0.98
HOXB3-209ENST00000478644 ETNK1Q9HBU6 452 aa8.9□□□□□ -0.98
HOXB3-209ENST00000478644 PARD3Q8TEW0 1356 aa8.89□□□□□ -0.99
HOXB3-209ENST00000478644 ABCA3Q99758 1704 aa8.89□□□□□ -0.99
HOXB3-209ENST00000478644 H7C1W4 665 aa8.89□□□□□ -0.99
HOXB3-209ENST00000478644 LZTS3O60299 673 aaPredicted RBP8.89□□□□□ -0.99
HOXB3-209ENST00000478644 KCNH5Q8NCM2 988 aa8.89□□□□□ -0.99
HOXB3-209ENST00000478644 POM121Q96HA1 1249 aa8.89□□□□□ -0.99
HOXB3-209ENST00000478644 PUS7Q96PZ0 661 aaKnown RBP8.89□□□□□ -0.99
HOXB3-209ENST00000478644 SIN3AQ96ST3 1273 aa8.89□□□□□ -0.99
HOXB3-209ENST00000478644 ZSCAN10Q96SZ4 725 aaPredicted RBP8.89□□□□□ -0.99
HOXB3-209ENST00000478644 PPIP5K1Q6PFW1 1433 aa8.88□□□□□ -0.99
HOXB3-209ENST00000478644 SPATA31A1Q5TZJ5 1347 aa8.88□□□□□ -0.99
HOXB3-209ENST00000478644 GCP02774 474 aa8.88□□□□□ -0.99
HOXB3-209ENST00000478644 F11P03951 625 aa8.88□□□□□ -0.99
HOXB3-209ENST00000478644 PDE3BQ13370 1112 aa8.88□□□□□ -0.99
HOXB3-209ENST00000478644 GAS6Q14393 721 aa8.88□□□□□ -0.99
HOXB3-209ENST00000478644 NBPF1Q3BBV0 1214 aa8.88□□□□□ -0.99
HOXB3-209ENST00000478644 OXLD1Q5BKU9 147 aa8.88□□□□□ -0.99
HOXB3-209ENST00000478644 WWC1Q8IX03 1113 aa8.88□□□□□ -0.99
HOXB3-209ENST00000478644 L3MBTL2Q969R5 705 aa8.88□□□□□ -0.99
HOXB3-209ENST00000478644 PCGF6Q9BYE7 350 aa8.88□□□□□ -0.99
HOXB3-209ENST00000478644 TIMMDC1Q9NPL8 285 aa8.88□□□□□ -0.99
HOXB3-209ENST00000478644 ROCK2O75116 1388 aaKnown RBP8.87□□□□□ -0.99
HOXB3-209ENST00000478644 KIAA0232Q92628 1395 aa8.87□□□□□ -0.99
HOXB3-209ENST00000478644 USP19O94966 1318 aa8.87□□□□□ -0.99
HOXB3-209ENST00000478644 TTC21AQ8NDW8 1320 aa8.87□□□□□ -0.99
HOXB3-209ENST00000478644 RAD21O60216 631 aa8.87□□□□□ -0.99
HOXB3-209ENST00000478644 SCNN1DP51172 638 aa8.87□□□□□ -0.99
HOXB3-209ENST00000478644 SRSF11Q05519 484 aaKnown RBP8.87□□□□□ -0.99
HOXB3-209ENST00000478644 NEUROD1Q13562 356 aa8.87□□□□□ -0.99
HOXB3-209ENST00000478644 TCP11L2Q8N4U5 519 aa8.87□□□□□ -0.99
HOXB3-209ENST00000478644 DISP2A7MBM2 1401 aa8.87□□□□□ -0.99
HOXB3-209ENST00000478644 SBNO2Q9Y2G9 1366 aa8.86□□□□□ -0.99
HOXB3-209ENST00000478644 NRAPQ86VF7 1730 aa8.86□□□□□ -0.99
HOXB3-209ENST00000478644 TOPAZ1Q8N9V7 1692 aa8.86□□□□□ -0.99
HOXB3-209ENST00000478644 INHAP05111 366 aa8.86□□□□□ -0.99
HOXB3-209ENST00000478644 ZNF385CQ66K41 422 aaPredicted RBP8.86□□□□□ -0.99
HOXB3-209ENST00000478644 CABP1Q9NZU7 370 aa8.86□□□□□ -0.99
HOXB3-209ENST00000478644 AATKQ6ZMQ8 1374 aa8.86□□□□□ -0.99
HOXB3-209ENST00000478644 A0A1B0GTH6 734 aa8.85□□□□□ -0.99
HOXB3-209ENST00000478644 ZC3H6P61129 1189 aaKnown RBP8.85□□□□□ -0.99
HOXB3-209ENST00000478644 FOXR1Q6PIV2 292 aa8.85□□□□□ -0.99
HOXB3-209ENST00000478644 RIPOR1Q6ZS17 1223 aa8.85□□□□□ -0.99
HOXB3-209ENST00000478644 SLC4A9Q96Q91 983 aa8.85□□□□□ -0.99
HOXB3-209ENST00000478644 GAS2L1Q99501 681 aaPredicted RBP8.85□□□□□ -0.99
HOXB3-209ENST00000478644 PIK3CDO00329 1044 aa8.84□□□□□ -0.99
HOXB3-209ENST00000478644 ARHGEF15O94989 841 aa8.84□□□□□ -0.99
HOXB3-209ENST00000478644 RGPD1P0DJD0 1748 aa8.84□□□□□ -0.99
HOXB3-209ENST00000478644 USP6P35125 1406 aa8.84□□□□□ -0.99
HOXB3-209ENST00000478644 LBRQ14739 615 aaKnown RBP8.84□□□□□ -0.99
HOXB3-209ENST00000478644 C4orf17Q53FE4 359 aa8.84□□□□□ -0.99
HOXB3-209ENST00000478644 SSH2Q76I76 1423 aa8.84□□□□□ -0.99
HOXB3-209ENST00000478644 RHBDD1Q8TEB9 315 aa8.84□□□□□ -0.99
HOXB3-209ENST00000478644 STRN4Q9NRL3 753 aa8.84□□□□□ -0.99
HOXB3-209ENST00000478644 CRYBG1Q9Y4K1 1723 aa8.84□□□□□ -0.99
HOXB3-209ENST00000478644 PCDHGA11Q9Y5H2 935 aa8.84□□□□□ -0.99
HOXB3-209ENST00000478644 BRWD3Q6RI45 1802 aa8.84□□□□□ -0.99
HOXB3-209ENST00000478644 EP400Q96L91 3159 aa8.83□□□□□ -1
HOXB3-209ENST00000478644 CLSPNQ9HAW4 1339 aa8.83□□□□□ -1
HOXB3-209ENST00000478644 CRB1P82279 1406 aa8.83□□□□□ -1
HOXB3-209ENST00000478644 STAU1O95793 577 aaKnown RBP8.83□□□□□ -1
HOXB3-209ENST00000478644 HMGB2P26583 209 aaKnown RBP8.83□□□□□ -1
HOXB3-209ENST00000478644 GTF2E1P29083 439 aaPredicted RBP8.83□□□□□ -1
HOXB3-209ENST00000478644 GDF10P55107 478 aa8.83□□□□□ -1
HOXB3-209ENST00000478644 GNASQ5JWF2 1037 aa8.83□□□□□ -1
HOXB3-209ENST00000478644 TMEM214Q6NUQ4 689 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms