RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 NOS3P29474 1203 aa7.89□□□□□ -1.15
CDC42BPA-212ENST00000478573 ZAP70P43403 619 aa7.89□□□□□ -1.15
CDC42BPA-212ENST00000478573 PIK3R5Q8WYR1 880 aa7.89□□□□□ -1.15
CDC42BPA-212ENST00000478573 COL26A1Q96A83 441 aa7.89□□□□□ -1.15
CDC42BPA-212ENST00000478573 FAM13BQ9NYF5 915 aa7.89□□□□□ -1.15
CDC42BPA-212ENST00000478573 PTCD1O75127 700 aaKnown RBP7.88□□□□□ -1.15
CDC42BPA-212ENST00000478573 SOX18P35713 384 aa7.88□□□□□ -1.15
CDC42BPA-212ENST00000478573 SRPK2P78362 688 aaKnown RBP7.88□□□□□ -1.15
CDC42BPA-212ENST00000478573 IGF2-ASQ6U949 168 aa7.88□□□□□ -1.15
CDC42BPA-212ENST00000478573 GPR152Q8TDT2 470 aa7.88□□□□□ -1.15
CDC42BPA-212ENST00000478573 SSBP4Q9BWG4 385 aaPredicted RBP7.87□□□□□ -1.15
CDC42BPA-212ENST00000478573 TRIM33Q9UPN9 1127 aa7.87□□□□□ -1.15
CDC42BPA-212ENST00000478573 DLL1O00548 723 aa7.86□□□□□ -1.15
CDC42BPA-212ENST00000478573 CLP1Q92989 425 aaKnown RBP7.86□□□□□ -1.15
CDC42BPA-212ENST00000478573 PBXIP1Q96AQ6 731 aa7.86□□□□□ -1.15
CDC42BPA-212ENST00000478573 MEGF10Q96KG7 1140 aa7.86□□□□□ -1.15
CDC42BPA-212ENST00000478573 STIM2Q9P246 746 aa7.86□□□□□ -1.15
CDC42BPA-212ENST00000478573 ALX3O95076 343 aa7.85□□□□□ -1.15
CDC42BPA-212ENST00000478573 SCNN1AP37088 669 aa7.85□□□□□ -1.15
CDC42BPA-212ENST00000478573 TTC39BQ5VTQ0 682 aaPredicted RBP7.85□□□□□ -1.15
CDC42BPA-212ENST00000478573 SPACA7Q96KW9 195 aa7.85□□□□□ -1.15
CDC42BPA-212ENST00000478573 LACRTQ9GZZ8 138 aa7.85□□□□□ -1.15
CDC42BPA-212ENST00000478573 ZFP64Q9NPA5 681 aa7.85□□□□□ -1.15
CDC42BPA-212ENST00000478573 FNDC3AQ9Y2H6 1198 aaKnown RBP7.85□□□□□ -1.15
CDC42BPA-212ENST00000478573 ARID3CA6NKF2 412 aa7.84□□□□□ -1.15
CDC42BPA-212ENST00000478573 SUPT5HO00267 1087 aaKnown RBP7.84□□□□□ -1.15
CDC42BPA-212ENST00000478573 ATP2B4P23634 1241 aa7.84□□□□□ -1.15
CDC42BPA-212ENST00000478573 ATP11AP98196 1134 aa7.84□□□□□ -1.15
CDC42BPA-212ENST00000478573 HYAL2Q12891 473 aa7.84□□□□□ -1.15
CDC42BPA-212ENST00000478573 COL13A1Q5TAT6 717 aaPredicted RBP7.84□□□□□ -1.15
CDC42BPA-212ENST00000478573 ABTB2Q8N961 1025 aa7.84□□□□□ -1.15
CDC42BPA-212ENST00000478573 OR13H1Q8NG92 308 aa7.84□□□□□ -1.15
CDC42BPA-212ENST00000478573 MRPL18Q9H0U6 180 aaKnown RBP7.84□□□□□ -1.15
CDC42BPA-212ENST00000478573 AKTIPQ9H8T0 292 aa7.84□□□□□ -1.15
CDC42BPA-212ENST00000478573 ZBTB39O15060 712 aa7.83□□□□□ -1.16
CDC42BPA-212ENST00000478573 HOXD8P13378 290 aaPredicted RBP7.83□□□□□ -1.16
CDC42BPA-212ENST00000478573 CDC25BP30305 580 aa7.83□□□□□ -1.16
CDC42BPA-212ENST00000478573 SETDB1Q15047 1291 aa7.83□□□□□ -1.16
CDC42BPA-212ENST00000478573 ARTNQ5T4W7 220 aa7.83□□□□□ -1.16
CDC42BPA-212ENST00000478573 CEP135Q66GS9 1140 aa7.83□□□□□ -1.16
CDC42BPA-212ENST00000478573 TXNDC11Q6PKC3 985 aa7.83□□□□□ -1.16
CDC42BPA-212ENST00000478573 SLAIN2Q9P270 581 aa7.83□□□□□ -1.16
CDC42BPA-212ENST00000478573 SEPT3Q9UH03 358 aa7.83□□□□□ -1.16
CDC42BPA-212ENST00000478573 SERPINA10Q9UK55 444 aa7.83□□□□□ -1.16
CDC42BPA-212ENST00000478573 LINC01387J3KSC0 135 aa7.82□□□□□ -1.16
CDC42BPA-212ENST00000478573 SMNDC1O75940 238 aaKnown RBP eCLIP7.82□□□□□ -1.16
CDC42BPA-212ENST00000478573 NBPF11Q86T75 865 aa7.82□□□□□ -1.16
CDC42BPA-212ENST00000478573 ATCAYQ86WG3 371 aa7.82□□□□□ -1.16
CDC42BPA-212ENST00000478573 AGGF1Q8N302 714 aaeCLIP7.82□□□□□ -1.16
CDC42BPA-212ENST00000478573 ABI2Q9NYB9 513 aaPredicted RBP7.82□□□□□ -1.16
CDC42BPA-212ENST00000478573 PPME1Q9Y570 386 aa7.82□□□□□ -1.16
CDC42BPA-212ENST00000478573 CYP2E1P05181 493 aaPredicted RBP7.81□□□□□ -1.16
CDC42BPA-212ENST00000478573 GLB1P16278 677 aa7.81□□□□□ -1.16
CDC42BPA-212ENST00000478573 MAP4K3Q8IVH8 894 aa7.81□□□□□ -1.16
CDC42BPA-212ENST00000478573 NUDT16Q96DE0 195 aaKnown RBP7.81□□□□□ -1.16
CDC42BPA-212ENST00000478573 RASSF4Q9H2L5 321 aa7.81□□□□□ -1.16
CDC42BPA-212ENST00000478573 SRA1Q9HD15 236 aaKnown RBP7.81□□□□□ -1.16
CDC42BPA-212ENST00000478573 F8W735 103 aaPredicted RBP7.8□□□□□ -1.16
CDC42BPA-212ENST00000478573 NCAPG2Q86XI2 1143 aa7.8□□□□□ -1.16
CDC42BPA-212ENST00000478573 DCAF11Q8TEB1 546 aa7.8□□□□□ -1.16
CDC42BPA-212ENST00000478573 MUC3BQ9H195 1237 aa7.8□□□□□ -1.16
CDC42BPA-212ENST00000478573 KANSL3Q9P2N6 904 aa7.8□□□□□ -1.16
CDC42BPA-212ENST00000478573 FAM177BA6PVY3 158 aa7.79□□□□□ -1.16
CDC42BPA-212ENST00000478573 LRP8Q14114 963 aa7.79□□□□□ -1.16
CDC42BPA-212ENST00000478573 PRR23CQ6ZRP0 262 aa7.79□□□□□ -1.16
CDC42BPA-212ENST00000478573 ZNF438Q7Z4V0 828 aa7.79□□□□□ -1.16
CDC42BPA-212ENST00000478573 CACTIN-AS1Q8N1I8 211 aa7.79□□□□□ -1.16
CDC42BPA-212ENST00000478573 GALNT11Q8NCW6 608 aa7.79□□□□□ -1.16
CDC42BPA-212ENST00000478573 CARD10Q9BWT7 1032 aa7.79□□□□□ -1.16
CDC42BPA-212ENST00000478573 ELP3Q9H9T3 547 aa7.79□□□□□ -1.16
CDC42BPA-212ENST00000478573 CDC27P30260 824 aa7.78□□□□□ -1.16
CDC42BPA-212ENST00000478573 DNM1Q05193 864 aaKnown RBP7.78□□□□□ -1.16
CDC42BPA-212ENST00000478573 EDEM1Q92611 657 aa7.78□□□□□ -1.16
CDC42BPA-212ENST00000478573 TMEM63CQ9P1W3 806 aa7.78□□□□□ -1.16
CDC42BPA-212ENST00000478573 ACAD11Q709F0 780 aa7.77□□□□□ -1.17
CDC42BPA-212ENST00000478573 DZIP1LQ8IYY4 767 aaKnown RBP7.77□□□□□ -1.17
CDC42BPA-212ENST00000478573 TMEM130Q8N3G9 435 aa7.77□□□□□ -1.17
CDC42BPA-212ENST00000478573 KIF4AO95239 1232 aa7.76□□□□□ -1.17
CDC42BPA-212ENST00000478573 WISP1O95388 367 aa7.76□□□□□ -1.17
CDC42BPA-212ENST00000478573 C8orf34Q49A92 452 aa7.76□□□□□ -1.17
CDC42BPA-212ENST00000478573 PDE12Q6L8Q7 609 aaKnown RBP7.76□□□□□ -1.17
CDC42BPA-212ENST00000478573 FAM117BQ6P1L5 589 aa7.76□□□□□ -1.17
CDC42BPA-212ENST00000478573 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.76□□□□□ -1.17
CDC42BPA-212ENST00000478573 TTC16Q8NEE8 873 aa7.76□□□□□ -1.17
CDC42BPA-212ENST00000478573 HELQQ8TDG4 1101 aa7.76□□□□□ -1.17
CDC42BPA-212ENST00000478573 PBX4Q9BYU1 374 aa7.76□□□□□ -1.17
CDC42BPA-212ENST00000478573 SH2B1Q9NRF2 756 aaPredicted RBP7.76□□□□□ -1.17
CDC42BPA-212ENST00000478573 HYAL3O43820 417 aaPredicted RBP7.75□□□□□ -1.17
CDC42BPA-212ENST00000478573 PCSK2P16519 638 aa7.75□□□□□ -1.17
CDC42BPA-212ENST00000478573 PTPRAP18433 802 aa7.75□□□□□ -1.17
CDC42BPA-212ENST00000478573 CD68P34810 354 aaPredicted RBP7.75□□□□□ -1.17
CDC42BPA-212ENST00000478573 ADAMTSL4Q6UY14 1074 aa7.75□□□□□ -1.17
CDC42BPA-212ENST00000478573 CNTN3Q9P232 1028 aa7.75□□□□□ -1.17
CDC42BPA-212ENST00000478573 A6NHS1 94 aa7.74□□□□□ -1.17
CDC42BPA-212ENST00000478573 FSCN2O14926 492 aa7.74□□□□□ -1.17
CDC42BPA-212ENST00000478573 ACPPP15309 386 aa7.74□□□□□ -1.17
CDC42BPA-212ENST00000478573 FSTP19883 344 aa7.74□□□□□ -1.17
CDC42BPA-212ENST00000478573 EPHA1P21709 976 aa7.74□□□□□ -1.17
CDC42BPA-212ENST00000478573 MPSTP25325 297 aa7.74□□□□□ -1.17
CDC42BPA-212ENST00000478573 NOM1Q5C9Z4 860 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms