RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 KRT26Q7Z3Y9 468 aa16.64■□□□□ 0.25
TDP2-204ENST00000478507 MBIPQ9NS73 344 aa16.64■□□□□ 0.25
TDP2-204ENST00000478507 ADAMTS8Q9UP79 889 aa16.64■□□□□ 0.25
TDP2-204ENST00000478507 CCDC85CA6NKD9 419 aa16.63■□□□□ 0.25
TDP2-204ENST00000478507 C6orf229H3BNL8 230 aa16.63■□□□□ 0.25
TDP2-204ENST00000478507 VIL1P09327 827 aaKnown RBP16.63■□□□□ 0.25
TDP2-204ENST00000478507 RTL5Q5HYW3 569 aaPredicted RBP16.63■□□□□ 0.25
TDP2-204ENST00000478507 ZBTB38Q8NAP3 1195 aaPredicted RBP16.63■□□□□ 0.25
TDP2-204ENST00000478507 MCOLN1Q9GZU1 580 aa16.63■□□□□ 0.25
TDP2-204ENST00000478507 ADM5C9JUS6 153 aa16.62■□□□□ 0.25
TDP2-204ENST00000478507 DOK7Q18PE1 504 aa16.62■□□□□ 0.25
TDP2-204ENST00000478507 EYA3Q99504 573 aa16.62■□□□□ 0.25
TDP2-204ENST00000478507 SEC31BQ9NQW1 1179 aa16.62■□□□□ 0.25
TDP2-204ENST00000478507 RGMBQ6NW40 437 aa16.61■□□□□ 0.25
TDP2-204ENST00000478507 PHAXQ9H814 394 aaKnown RBP16.61■□□□□ 0.25
TDP2-204ENST00000478507 GBA2Q9HCG7 927 aaPredicted RBP16.61■□□□□ 0.25
TDP2-204ENST00000478507 TNRC18O15417 2968 aaPredicted RBP16.61■□□□□ 0.25
TDP2-204ENST00000478507 SLC34A2O95436 690 aa16.6■□□□□ 0.25
TDP2-204ENST00000478507 DDX10Q13206 875 aaKnown RBP16.6■□□□□ 0.25
TDP2-204ENST00000478507 WDR43Q15061 677 aaKnown RBP eCLIP16.6■□□□□ 0.25
TDP2-204ENST00000478507 KIF4BQ2VIQ3 1234 aa16.6■□□□□ 0.25
TDP2-204ENST00000478507 ASTN2O75129 1339 aaPredicted RBP16.6■□□□□ 0.25
TDP2-204ENST00000478507 ZNF280AP59817 542 aaPredicted RBP16.59■□□□□ 0.25
TDP2-204ENST00000478507 MLLT1Q03111 559 aaPredicted RBP16.59■□□□□ 0.25
TDP2-204ENST00000478507 DCPSQ96C86 337 aaKnown RBP16.59■□□□□ 0.25
TDP2-204ENST00000478507 GGA3Q9NZ52 723 aa16.59■□□□□ 0.25
TDP2-204ENST00000478507 ZNF646O15015 1829 aaPredicted RBP16.59■□□□□ 0.25
TDP2-204ENST00000478507 UFL1O94874 794 aa16.58■□□□□ 0.24
TDP2-204ENST00000478507 PCCAP05165 728 aaPredicted RBP16.58■□□□□ 0.24
TDP2-204ENST00000478507 GOLGA2Q08379 1002 aa16.58■□□□□ 0.24
TDP2-204ENST00000478507 RBM26Q5T8P6 1007 aaKnown RBP16.58■□□□□ 0.24
TDP2-204ENST00000478507 RIC3Q7Z5B4 369 aa16.58■□□□□ 0.24
TDP2-204ENST00000478507 C2orf69Q8N8R5 385 aa16.58■□□□□ 0.24
TDP2-204ENST00000478507 CCDC191Q8NCU4 936 aa16.58■□□□□ 0.24
TDP2-204ENST00000478507 CCDC102AQ96A19 550 aa16.58■□□□□ 0.24
TDP2-204ENST00000478507 GMLQ99445 158 aa16.58■□□□□ 0.24
TDP2-204ENST00000478507 ZC3H12CQ9C0D7 883 aaKnown RBP16.58■□□□□ 0.24
TDP2-204ENST00000478507 IFT57Q9NWB7 429 aa16.58■□□□□ 0.24
TDP2-204ENST00000478507 SAGE1Q9NXZ1 904 aa16.58■□□□□ 0.24
TDP2-204ENST00000478507 AKAP11Q9UKA4 1901 aa16.58■□□□□ 0.24
TDP2-204ENST00000478507 SLC10A3P09131 477 aa16.57■□□□□ 0.24
TDP2-204ENST00000478507 DGKZQ13574 1117 aa16.57■□□□□ 0.24
TDP2-204ENST00000478507 AGBL3Q8NEM8 1001 aa16.57■□□□□ 0.24
TDP2-204ENST00000478507 MYD88Q99836 296 aa16.57■□□□□ 0.24
TDP2-204ENST00000478507 GGA1Q9UJY5 639 aa16.57■□□□□ 0.24
TDP2-204ENST00000478507 PDE8AO60658 829 aa16.56■□□□□ 0.24
TDP2-204ENST00000478507 HSP90B1P14625 803 aaKnown RBP16.56■□□□□ 0.24
TDP2-204ENST00000478507 KIF23Q02241 960 aaPredicted RBP16.56■□□□□ 0.24
TDP2-204ENST00000478507 CCDC152Q4G0S7 254 aa16.56■□□□□ 0.24
TDP2-204ENST00000478507 RSBN1LQ6PCB5 846 aaPredicted RBP16.56■□□□□ 0.24
TDP2-204ENST00000478507 SULF1Q8IWU6 871 aa16.56■□□□□ 0.24
TDP2-204ENST00000478507 CDCA5Q96FF9 252 aa16.56■□□□□ 0.24
TDP2-204ENST00000478507 ANKIB1Q9P2G1 1089 aa16.56■□□□□ 0.24
TDP2-204ENST00000478507 MYH3P11055 1940 aa16.55■□□□□ 0.24
TDP2-204ENST00000478507 ZNF157P51786 506 aaPredicted RBP16.55■□□□□ 0.24
TDP2-204ENST00000478507 C8orf58Q8NAV2 365 aa16.55■□□□□ 0.24
TDP2-204ENST00000478507 METTL22Q9BUU2 404 aaPredicted RBP16.55■□□□□ 0.24
TDP2-204ENST00000478507 CWC25Q9NXE8 425 aaPredicted RBP16.55■□□□□ 0.24
TDP2-204ENST00000478507 PAPPA2Q9BXP8 1791 aa16.55■□□□□ 0.24
TDP2-204ENST00000478507 PDE4DIPQ5VU43 2346 aa16.54■□□□□ 0.24
TDP2-204ENST00000478507 XDHP47989 1333 aa16.54■□□□□ 0.24
TDP2-204ENST00000478507 ELL2O00472 640 aaPredicted RBP16.54■□□□□ 0.24
TDP2-204ENST00000478507 APAF1O14727 1248 aa16.54■□□□□ 0.24
TDP2-204ENST00000478507 GNAI1P63096 354 aa16.54■□□□□ 0.24
TDP2-204ENST00000478507 JARID2Q92833 1246 aaPredicted RBP16.54■□□□□ 0.24
TDP2-204ENST00000478507 CSRNP1Q96S65 589 aa16.54■□□□□ 0.24
TDP2-204ENST00000478507 PRKRIP1Q9H875 184 aaPredicted RBP16.54■□□□□ 0.24
TDP2-204ENST00000478507 RNF186Q9NXI6 227 aa16.54■□□□□ 0.24
TDP2-204ENST00000478507 PITPNM2Q9BZ72 1349 aa16.53■□□□□ 0.24
TDP2-204ENST00000478507 WTIPA6NIX2 430 aaPredicted RBP16.53■□□□□ 0.24
TDP2-204ENST00000478507 SCARF1Q14162 830 aa16.53■□□□□ 0.24
TDP2-204ENST00000478507 ANGEL2Q5VTE6 544 aaKnown RBP16.53■□□□□ 0.24
TDP2-204ENST00000478507 SPEF2Q9C093 1822 aa16.52■□□□□ 0.24
TDP2-204ENST00000478507 TRPA1O75762 1119 aa16.52■□□□□ 0.24
TDP2-204ENST00000478507 IGKV5-2P06315 115 aa16.52■□□□□ 0.24
TDP2-204ENST00000478507 USP17L8P0C7I0 530 aa16.52■□□□□ 0.24
TDP2-204ENST00000478507 CTSWP56202 376 aa16.52■□□□□ 0.24
TDP2-204ENST00000478507 FKBP1BP68106 108 aa16.52■□□□□ 0.24
TDP2-204ENST00000478507 CALD1Q05682 793 aaKnown RBP16.52■□□□□ 0.24
TDP2-204ENST00000478507 PODNQ7Z5L7 613 aa16.52■□□□□ 0.24
TDP2-204ENST00000478507 RASAL3Q86YV0 1011 aa16.52■□□□□ 0.24
TDP2-204ENST00000478507 ANKRD18AQ8IVF6 992 aa16.52■□□□□ 0.24
TDP2-204ENST00000478507 CCDC85AQ96PX6 553 aaPredicted RBP16.52■□□□□ 0.24
TDP2-204ENST00000478507 MYOZ2Q9NPC6 264 aa16.52■□□□□ 0.24
TDP2-204ENST00000478507 MED23Q9ULK4 1368 aa16.51■□□□□ 0.23
TDP2-204ENST00000478507 ATP2B4P23634 1241 aa16.51■□□□□ 0.23
TDP2-204ENST00000478507 TSPYL6Q8N831 410 aa16.51■□□□□ 0.23
TDP2-204ENST00000478507 TTLL11Q8NHH1 800 aa16.51■□□□□ 0.23
TDP2-204ENST00000478507 USP17L3A6NCW0 530 aa16.5■□□□□ 0.23
TDP2-204ENST00000478507 USP17L4A6NCW7 530 aa16.5■□□□□ 0.23
TDP2-204ENST00000478507 G3V3G9 751 aa16.5■□□□□ 0.23
TDP2-204ENST00000478507 DCAF8Q5TAQ9 597 aa16.5■□□□□ 0.23
TDP2-204ENST00000478507 CCDC30Q5VVM6 783 aa16.5■□□□□ 0.23
TDP2-204ENST00000478507 USP17L1Q7RTZ2 530 aa16.5■□□□□ 0.23
TDP2-204ENST00000478507 BSDC1Q9NW68 430 aaPredicted RBP16.5■□□□□ 0.23
TDP2-204ENST00000478507 MAP3K2Q9Y2U5 619 aa16.5■□□□□ 0.23
TDP2-204ENST00000478507 DDX58O95786 925 aaKnown RBP16.49■□□□□ 0.23
TDP2-204ENST00000478507 DACT2Q5SW24 774 aa16.49■□□□□ 0.23
TDP2-204ENST00000478507 KSR2Q6VAB6 950 aa16.49■□□□□ 0.23
TDP2-204ENST00000478507 REM2Q8IYK8 340 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms