RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 WDR17Q8IZU2 1322 aa17.5■□□□□ 0.39
U2AF1-210ENST00000478282 A0A0D9SFI3 127 aa17.5■□□□□ 0.39
U2AF1-210ENST00000478282 GOLGA6L19H0YKK7 550 aa17.5■□□□□ 0.39
U2AF1-210ENST00000478282 HSPA1LP34931 641 aa17.5■□□□□ 0.39
U2AF1-210ENST00000478282 RESTQ13127 1097 aa17.5■□□□□ 0.39
U2AF1-210ENST00000478282 ZNF592Q92610 1267 aa17.5■□□□□ 0.39
U2AF1-210ENST00000478282 MRFAP1L1Q96HT8 127 aa17.5■□□□□ 0.39
U2AF1-210ENST00000478282 SHANK3Q9BYB0 1731 aa17.5■□□□□ 0.39
U2AF1-210ENST00000478282 STK3Q13188 491 aa17.5■□□□□ 0.39
U2AF1-210ENST00000478282 CHRNA2Q15822 529 aa17.5■□□□□ 0.39
U2AF1-210ENST00000478282 TAF6LQ9Y6J9 622 aa17.5■□□□□ 0.39
U2AF1-210ENST00000478282 PRDM11Q9NQV5 511 aa17.49■□□□□ 0.39
U2AF1-210ENST00000478282 ANXA1P04083 346 aa17.49■□□□□ 0.39
U2AF1-210ENST00000478282 ZNF397Q8NF99 534 aaPredicted RBP17.49■□□□□ 0.39
U2AF1-210ENST00000478282 C9orf78Q9NZ63 289 aaPredicted RBP17.49■□□□□ 0.39
U2AF1-210ENST00000478282 HMG20BQ9P0W2 317 aa17.49■□□□□ 0.39
U2AF1-210ENST00000478282 NYAP1Q6ZVC0 841 aa17.49■□□□□ 0.39
U2AF1-210ENST00000478282 ALDH1L1O75891 902 aa17.48■□□□□ 0.39
U2AF1-210ENST00000478282 TSGA10IPQ3SY00 556 aa17.48■□□□□ 0.39
U2AF1-210ENST00000478282 USP27XA6NNY8 438 aa17.48■□□□□ 0.39
U2AF1-210ENST00000478282 SLFN14P0C7P3 912 aa17.48■□□□□ 0.39
U2AF1-210ENST00000478282 LTV1Q96GA3 475 aaPredicted RBP17.48■□□□□ 0.39
U2AF1-210ENST00000478282 JAK2O60674 1132 aa17.47■□□□□ 0.39
U2AF1-210ENST00000478282 PTPN14Q15678 1187 aa17.47■□□□□ 0.39
U2AF1-210ENST00000478282 C11orf57Q6ZUT1 292 aaPredicted RBP17.47■□□□□ 0.39
U2AF1-210ENST00000478282 BRF1Q92994 677 aa17.47■□□□□ 0.39
U2AF1-210ENST00000478282 GTF3C6Q969F1 213 aa17.47■□□□□ 0.39
U2AF1-210ENST00000478282 FSD1Q9BTV5 496 aa17.47■□□□□ 0.39
U2AF1-210ENST00000478282 HDAC5Q9UQL6 1122 aa17.47■□□□□ 0.39
U2AF1-210ENST00000478282 MYH15Q9Y2K3 1946 aa17.47■□□□□ 0.39
U2AF1-210ENST00000478282 ARID5BQ14865 1188 aa17.47■□□□□ 0.39
U2AF1-210ENST00000478282 EAF2Q96CJ1 260 aaPredicted RBP17.47■□□□□ 0.39
U2AF1-210ENST00000478282 ZNF215Q9UL58 517 aaPredicted RBP17.47■□□□□ 0.39
U2AF1-210ENST00000478282 SASH1O94885 1247 aa17.47■□□□□ 0.39
U2AF1-210ENST00000478282 STX1AQ16623 288 aa17.47■□□□□ 0.39
U2AF1-210ENST00000478282 CFAP45Q9UL16 551 aa17.47■□□□□ 0.39
U2AF1-210ENST00000478282 SKILP12757 684 aa17.46■□□□□ 0.39
U2AF1-210ENST00000478282 KRT222Q8N1A0 295 aa17.46■□□□□ 0.39
U2AF1-210ENST00000478282 ZSCAN16Q9H4T2 348 aaPredicted RBP17.46■□□□□ 0.39
U2AF1-210ENST00000478282 CTAGE5O15320 804 aa17.46■□□□□ 0.39
U2AF1-210ENST00000478282 KMT5BQ4FZB7 885 aa17.46■□□□□ 0.39
U2AF1-210ENST00000478282 USHBP1Q8N6Y0 703 aa17.46■□□□□ 0.39
U2AF1-210ENST00000478282 CCDC8Q9H0W5 538 aaPredicted RBP17.46■□□□□ 0.39
U2AF1-210ENST00000478282 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.46■□□□□ 0.39
U2AF1-210ENST00000478282 KCNQ3O43525 872 aa17.46■□□□□ 0.38
U2AF1-210ENST00000478282 MAP3K2Q9Y2U5 619 aa17.46■□□□□ 0.38
U2AF1-210ENST00000478282 LGR6Q9HBX8 967 aa17.45■□□□□ 0.38
U2AF1-210ENST00000478282 DISP2A7MBM2 1401 aa17.45■□□□□ 0.38
U2AF1-210ENST00000478282 H3BQV1 296 aa17.45■□□□□ 0.38
U2AF1-210ENST00000478282 CCZ1BP86790 482 aa17.45■□□□□ 0.38
U2AF1-210ENST00000478282 CCZ1P86791 482 aaPredicted RBP17.45■□□□□ 0.38
U2AF1-210ENST00000478282 IFFO2Q5TF58 517 aa17.45■□□□□ 0.38
U2AF1-210ENST00000478282 ZNF589Q86UQ0 364 aaPredicted RBP17.45■□□□□ 0.38
U2AF1-210ENST00000478282 ERO1AQ96HE7 468 aa17.45■□□□□ 0.38
U2AF1-210ENST00000478282 BOLA2Q9H3K6 86 aa17.45■□□□□ 0.38
U2AF1-210ENST00000478282 DBF4Q9UBU7 674 aaPredicted RBP17.45■□□□□ 0.38
U2AF1-210ENST00000478282 MEGF6O75095 1541 aa17.45■□□□□ 0.38
U2AF1-210ENST00000478282 A0A0U1RQG5 324 aaPredicted RBP17.44■□□□□ 0.38
U2AF1-210ENST00000478282 CCDC69A6NI79 296 aa17.44■□□□□ 0.38
U2AF1-210ENST00000478282 KRT32Q14532 448 aa17.44■□□□□ 0.38
U2AF1-210ENST00000478282 CARD10Q9BWT7 1032 aa17.44■□□□□ 0.38
U2AF1-210ENST00000478282 TLR7Q9NYK1 1049 aaKnown RBP17.44■□□□□ 0.38
U2AF1-210ENST00000478282 G3BP1Q13283 466 aaKnown RBP eCLIP17.44■□□□□ 0.38
U2AF1-210ENST00000478282 TERF2Q15554 542 aa17.44■□□□□ 0.38
U2AF1-210ENST00000478282 DDX11Q96FC9 970 aa17.44■□□□□ 0.38
U2AF1-210ENST00000478282 KCND1Q9NSA2 647 aa17.44■□□□□ 0.38
U2AF1-210ENST00000478282 FAM53CQ9NYF3 392 aa17.44■□□□□ 0.38
U2AF1-210ENST00000478282 USP16Q9Y5T5 823 aa17.44■□□□□ 0.38
U2AF1-210ENST00000478282 BCL9LQ86UU0 1499 aa17.44■□□□□ 0.38
U2AF1-210ENST00000478282 OVOS2A0A0G2JMS6 1433 aa17.43■□□□□ 0.38
U2AF1-210ENST00000478282 TAF5LO75529 589 aa17.43■□□□□ 0.38
U2AF1-210ENST00000478282 SLFNL1Q499Z3 407 aa17.43■□□□□ 0.38
U2AF1-210ENST00000478282 USPL1Q5W0Q7 1092 aa17.43■□□□□ 0.38
U2AF1-210ENST00000478282 SIPA1L3O60292 1781 aaPredicted RBP17.43■□□□□ 0.38
U2AF1-210ENST00000478282 BECN2A8MW95 431 aa17.43■□□□□ 0.38
U2AF1-210ENST00000478282 CWF19L2Q2TBE0 894 aaKnown RBP17.43■□□□□ 0.38
U2AF1-210ENST00000478282 KSR2Q6VAB6 950 aa17.43■□□□□ 0.38
U2AF1-210ENST00000478282 CCAR2Q8N163 923 aaKnown RBP17.43■□□□□ 0.38
U2AF1-210ENST00000478282 BCL11BQ9C0K0 894 aaPredicted RBP17.42■□□□□ 0.38
U2AF1-210ENST00000478282 CCAR1Q8IX12 1150 aaKnown RBP17.42■□□□□ 0.38
U2AF1-210ENST00000478282 DHX40Q8IX18 779 aaKnown RBP17.42■□□□□ 0.38
U2AF1-210ENST00000478282 FNBP4Q8N3X1 1017 aaPredicted RBP17.42■□□□□ 0.38
U2AF1-210ENST00000478282 SUCLG2Q96I99 432 aa17.42■□□□□ 0.38
U2AF1-210ENST00000478282 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.42■□□□□ 0.38
U2AF1-210ENST00000478282 V9GYY5 206 aaPredicted RBP17.42■□□□□ 0.38
U2AF1-210ENST00000478282 ADD1P35611 737 aaKnown RBP17.42■□□□□ 0.38
U2AF1-210ENST00000478282 FBXO38Q6PIJ6 1188 aa17.42■□□□□ 0.38
U2AF1-210ENST00000478282 FILIP1Q7Z7B0 1213 aa17.42■□□□□ 0.38
U2AF1-210ENST00000478282 NEK1Q96PY6 1258 aa17.42■□□□□ 0.38
U2AF1-210ENST00000478282 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.42■□□□□ 0.38
U2AF1-210ENST00000478282 ELF2Q15723 593 aa17.41■□□□□ 0.38
U2AF1-210ENST00000478282 KAZALD1Q96I82 304 aa17.41■□□□□ 0.38
U2AF1-210ENST00000478282 GOLPH3LQ9H4A5 285 aa17.41■□□□□ 0.38
U2AF1-210ENST00000478282 BTG4Q9NY30 223 aa17.41■□□□□ 0.38
U2AF1-210ENST00000478282 RCOR1Q9UKL0 485 aa17.41■□□□□ 0.38
U2AF1-210ENST00000478282 BTBD11A6QL63 1104 aa17.41■□□□□ 0.38
U2AF1-210ENST00000478282 KIF2AO00139 706 aaPredicted RBP17.41■□□□□ 0.38
U2AF1-210ENST00000478282 SLU7O95391 586 aaKnown RBP17.41■□□□□ 0.38
U2AF1-210ENST00000478282 CEBPZQ03701 1054 aaKnown RBP17.41■□□□□ 0.38
U2AF1-210ENST00000478282 BICC1Q9H694 974 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms