RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 SLC27A2O14975 620 aa11.46□□□□□ -0.57
COL13A1-207ENST00000478219 GPATCH11Q8N954 259 aa11.46□□□□□ -0.57
COL13A1-207ENST00000478219 ENGASEQ8NFI3 743 aa11.46□□□□□ -0.57
COL13A1-207ENST00000478219 WDR24Q96S15 920 aa11.46□□□□□ -0.57
COL13A1-207ENST00000478219 PLEKHA4Q9H4M7 779 aa11.46□□□□□ -0.57
COL13A1-207ENST00000478219 CWC15Q9P013 229 aaKnown RBP11.46□□□□□ -0.57
COL13A1-207ENST00000478219 ADGRL3Q9HAR2 1447 aa11.46□□□□□ -0.57
COL13A1-207ENST00000478219 UBTFL1P0CB47 393 aaPredicted RBP11.46□□□□□ -0.58
COL13A1-207ENST00000478219 GNL2Q13823 731 aaKnown RBP11.46□□□□□ -0.58
COL13A1-207ENST00000478219 LRRFIP1Q32MZ4 808 aaKnown RBP11.46□□□□□ -0.58
COL13A1-207ENST00000478219 IQUBQ8NA54 791 aa11.46□□□□□ -0.58
COL13A1-207ENST00000478219 NCAPGQ9BPX3 1015 aa11.46□□□□□ -0.58
COL13A1-207ENST00000478219 ANO10Q9NW15 660 aa11.46□□□□□ -0.58
COL13A1-207ENST00000478219 EIF3CLB5ME19 914 aaKnown RBP11.45□□□□□ -0.58
COL13A1-207ENST00000478219 SRGAP3O43295 1099 aa11.45□□□□□ -0.58
COL13A1-207ENST00000478219 ATP8B1O43520 1251 aa11.45□□□□□ -0.58
COL13A1-207ENST00000478219 MYCNP04198 464 aaPredicted RBP11.45□□□□□ -0.58
COL13A1-207ENST00000478219 CEP57L1Q8IYX8 460 aa11.45□□□□□ -0.58
COL13A1-207ENST00000478219 AK7Q96M32 723 aa11.45□□□□□ -0.58
COL13A1-207ENST00000478219 SLC26A8Q96RN1 970 aa11.45□□□□□ -0.58
COL13A1-207ENST00000478219 EIF3CQ99613 913 aaKnown RBP11.45□□□□□ -0.58
COL13A1-207ENST00000478219 VPS18Q9P253 973 aa11.45□□□□□ -0.58
COL13A1-207ENST00000478219 IMPACTQ9P2X3 320 aa11.45□□□□□ -0.58
COL13A1-207ENST00000478219 XRN1Q8IZH2 1706 aaKnown RBP11.45□□□□□ -0.58
COL13A1-207ENST00000478219 A0A1B0GUL7 405 aa11.45□□□□□ -0.58
COL13A1-207ENST00000478219 BIN1O00499 593 aa11.45□□□□□ -0.58
COL13A1-207ENST00000478219 ATP1A3P13637 1013 aa11.45□□□□□ -0.58
COL13A1-207ENST00000478219 ZKSCAN1P17029 563 aaPredicted RBP11.45□□□□□ -0.58
COL13A1-207ENST00000478219 LONRF2Q1L5Z9 754 aa11.45□□□□□ -0.58
COL13A1-207ENST00000478219 TTC31Q49AM3 519 aaPredicted RBP11.45□□□□□ -0.58
COL13A1-207ENST00000478219 CCDC150Q8NCX0 1101 aa11.45□□□□□ -0.58
COL13A1-207ENST00000478219 USP28Q96RU2 1077 aa11.45□□□□□ -0.58
COL13A1-207ENST00000478219 UTP14AQ9BVJ6 771 aaKnown RBP11.45□□□□□ -0.58
COL13A1-207ENST00000478219 ZSWIM4Q9H7M6 989 aa11.45□□□□□ -0.58
COL13A1-207ENST00000478219 SUGCTQ9HAC7 445 aa11.45□□□□□ -0.58
COL13A1-207ENST00000478219 PDE11AQ9HCR9 933 aa11.45□□□□□ -0.58
COL13A1-207ENST00000478219 ARFGAP3Q9NP61 516 aa11.45□□□□□ -0.58
COL13A1-207ENST00000478219 RNF216Q9NWF9 866 aaPredicted RBP11.45□□□□□ -0.58
COL13A1-207ENST00000478219 HDAC5Q9UQL6 1122 aa11.45□□□□□ -0.58
COL13A1-207ENST00000478219 VWA3AA6NCI4 1184 aa11.44□□□□□ -0.58
COL13A1-207ENST00000478219 GIGYF1O75420 1035 aaPredicted RBP11.44□□□□□ -0.58
COL13A1-207ENST00000478219 POLA2Q14181 598 aa11.44□□□□□ -0.58
COL13A1-207ENST00000478219 WWC2Q6AWC2 1192 aa11.44□□□□□ -0.58
COL13A1-207ENST00000478219 RSRC2Q7L4I2 434 aaKnown RBP11.44□□□□□ -0.58
COL13A1-207ENST00000478219 POTEDQ86YR6 584 aa11.44□□□□□ -0.58
COL13A1-207ENST00000478219 DPF2Q92785 391 aa11.44□□□□□ -0.58
COL13A1-207ENST00000478219 PSD3Q9NYI0 1048 aa11.44□□□□□ -0.58
COL13A1-207ENST00000478219 CRYBG1Q9Y4K1 1723 aa11.44□□□□□ -0.58
COL13A1-207ENST00000478219 NBPF7P0C2Y1 421 aaPredicted RBP11.44□□□□□ -0.58
COL13A1-207ENST00000478219 RPS6KB1P23443 525 aa11.44□□□□□ -0.58
COL13A1-207ENST00000478219 MAGEA9P43362 315 aa11.44□□□□□ -0.58
COL13A1-207ENST00000478219 CTR9Q6PD62 1173 aa11.44□□□□□ -0.58
COL13A1-207ENST00000478219 MAP4K1Q92918 833 aa11.44□□□□□ -0.58
COL13A1-207ENST00000478219 MYCBPQ99417 103 aaPredicted RBP11.44□□□□□ -0.58
COL13A1-207ENST00000478219 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.44□□□□□ -0.58
COL13A1-207ENST00000478219 CHD2O14647 1828 aaKnown RBP11.44□□□□□ -0.58
COL13A1-207ENST00000478219 KINO60870 393 aaKnown RBP11.43□□□□□ -0.58
COL13A1-207ENST00000478219 NMIQ13287 307 aaPredicted RBP11.43□□□□□ -0.58
COL13A1-207ENST00000478219 MCM6Q14566 821 aa11.43□□□□□ -0.58
COL13A1-207ENST00000478219 CT47A1Q5JQC4 288 aaPredicted RBP11.43□□□□□ -0.58
COL13A1-207ENST00000478219 ISM2Q6H9L7 571 aa11.43□□□□□ -0.58
COL13A1-207ENST00000478219 BLOC1S2Q6QNY1 142 aa11.43□□□□□ -0.58
COL13A1-207ENST00000478219 GPR161Q8N6U8 529 aaKnown RBP11.43□□□□□ -0.58
COL13A1-207ENST00000478219 STK31Q9BXU1 1019 aa11.43□□□□□ -0.58
COL13A1-207ENST00000478219 TTC41PQ6P2S7 1318 aa11.43□□□□□ -0.58
COL13A1-207ENST00000478219 NPHP4O75161 1426 aaPredicted RBP11.43□□□□□ -0.58
COL13A1-207ENST00000478219 CPS1P31327 1500 aa11.43□□□□□ -0.58
COL13A1-207ENST00000478219 CTAGE5O15320 804 aa11.43□□□□□ -0.58
COL13A1-207ENST00000478219 ATP2B1P20020 1258 aa11.43□□□□□ -0.58
COL13A1-207ENST00000478219 LMOD1P29536 600 aaPredicted RBP11.43□□□□□ -0.58
COL13A1-207ENST00000478219 PPP2R3AQ06190 1150 aa11.43□□□□□ -0.58
COL13A1-207ENST00000478219 NCAPHQ15003 741 aa11.43□□□□□ -0.58
COL13A1-207ENST00000478219 FSIP1Q8NA03 581 aa11.43□□□□□ -0.58
COL13A1-207ENST00000478219 PHAXQ9H814 394 aaKnown RBP11.43□□□□□ -0.58
COL13A1-207ENST00000478219 NEDD4P46934 1319 aa11.43□□□□□ -0.58
COL13A1-207ENST00000478219 A0A0D9SFI3 127 aa11.42□□□□□ -0.58
COL13A1-207ENST00000478219 A0A1B0GVL5 298 aa11.42□□□□□ -0.58
COL13A1-207ENST00000478219 H3BQV1 296 aa11.42□□□□□ -0.58
COL13A1-207ENST00000478219 MAP2K7O14733 419 aa11.42□□□□□ -0.58
COL13A1-207ENST00000478219 KCNJ6P48051 423 aa11.42□□□□□ -0.58
COL13A1-207ENST00000478219 MAP3K9P80192 1104 aa11.42□□□□□ -0.58
COL13A1-207ENST00000478219 IFFO2Q5TF58 517 aa11.42□□□□□ -0.58
COL13A1-207ENST00000478219 CYB5RLQ6IPT4 315 aa11.42□□□□□ -0.58
COL13A1-207ENST00000478219 HSD3B7Q9H2F3 369 aa11.42□□□□□ -0.58
COL13A1-207ENST00000478219 RCOR1Q9UKL0 485 aa11.42□□□□□ -0.58
COL13A1-207ENST00000478219 GLRX3O76003 335 aaKnown RBP11.42□□□□□ -0.58
COL13A1-207ENST00000478219 FAM160A1Q05DH4 1040 aa11.42□□□□□ -0.58
COL13A1-207ENST00000478219 MTHFSDQ2M296 383 aaKnown RBP11.42□□□□□ -0.58
COL13A1-207ENST00000478219 HSP90AB2PQ58FF8 381 aa11.42□□□□□ -0.58
COL13A1-207ENST00000478219 CCDC73Q6ZRK6 1079 aa11.42□□□□□ -0.58
COL13A1-207ENST00000478219 COG3Q96JB2 828 aa11.42□□□□□ -0.58
COL13A1-207ENST00000478219 SEC62Q99442 399 aaKnown RBP11.42□□□□□ -0.58
COL13A1-207ENST00000478219 LRRC2Q9BYS8 371 aa11.42□□□□□ -0.58
COL13A1-207ENST00000478219 SIL1Q9H173 461 aa11.42□□□□□ -0.58
COL13A1-207ENST00000478219 BRMS1Q9HCU9 246 aa11.42□□□□□ -0.58
COL13A1-207ENST00000478219 AKAP2Q9Y2D5 859 aa11.42□□□□□ -0.58
COL13A1-207ENST00000478219 FAN1Q9Y2M0 1017 aa11.42□□□□□ -0.58
COL13A1-207ENST00000478219 TFRCP02786 760 aaKnown RBP11.41□□□□□ -0.58
COL13A1-207ENST00000478219 GUCY1B3Q02153 619 aa11.41□□□□□ -0.58
COL13A1-207ENST00000478219 APOBRQ0VD83 1088 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms