RNA–Protein interactions for RNA: ENST00000478216.1

RC3H2-208, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 3

Gene RC3H2, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-208ENST00000478216 PLBD2Q8NHP8 589 aa18.53■□□□□ 0.56
RC3H2-208ENST00000478216 ZC3H12CQ9C0D7 883 aaKnown RBP18.53■□□□□ 0.56
RC3H2-208ENST00000478216 KCNQ5Q9NR82 932 aa18.53■□□□□ 0.56
RC3H2-208ENST00000478216 POLLQ9UGP5 575 aa18.53■□□□□ 0.56
RC3H2-208ENST00000478216 SLC10A3P09131 477 aa18.52■□□□□ 0.56
RC3H2-208ENST00000478216 CDCA5Q96FF9 252 aa18.52■□□□□ 0.56
RC3H2-208ENST00000478216 ANKIB1Q9P2G1 1089 aa18.52■□□□□ 0.56
RC3H2-208ENST00000478216 RTL9Q8NET4 1388 aa18.52■□□□□ 0.55
RC3H2-208ENST00000478216 UFL1O94874 794 aa18.51■□□□□ 0.55
RC3H2-208ENST00000478216 TMPOP42166 694 aaKnown RBP18.51■□□□□ 0.55
RC3H2-208ENST00000478216 SF3B3Q15393 1217 aaKnown RBP18.51■□□□□ 0.55
RC3H2-208ENST00000478216 ANKRD13DQ6ZTN6 518 aa18.51■□□□□ 0.55
RC3H2-208ENST00000478216 TBC1D16Q8TBP0 767 aa18.51■□□□□ 0.55
RC3H2-208ENST00000478216 IRS4O14654 1257 aaPredicted RBP18.5■□□□□ 0.55
RC3H2-208ENST00000478216 CTU1Q7Z7A3 348 aaKnown RBP18.5■□□□□ 0.55
RC3H2-208ENST00000478216 AKAP11Q9UKA4 1901 aa18.5■□□□□ 0.55
RC3H2-208ENST00000478216 ASTN2O75129 1339 aaPredicted RBP18.49■□□□□ 0.55
RC3H2-208ENST00000478216 RPS8P62241 208 aaKnown RBP18.49■□□□□ 0.55
RC3H2-208ENST00000478216 ANGEL2Q5VTE6 544 aaKnown RBP18.49■□□□□ 0.55
RC3H2-208ENST00000478216 CCDC146Q8IYE0 955 aa18.49■□□□□ 0.55
RC3H2-208ENST00000478216 DBF4Q9UBU7 674 aaPredicted RBP18.49■□□□□ 0.55
RC3H2-208ENST00000478216 GGA1Q9UJY5 639 aa18.49■□□□□ 0.55
RC3H2-208ENST00000478216 HDAC9Q9UKV0 1011 aa18.49■□□□□ 0.55
RC3H2-208ENST00000478216 RASAL3Q86YV0 1011 aa18.48■□□□□ 0.55
RC3H2-208ENST00000478216 CSRNP1Q96S65 589 aa18.48■□□□□ 0.55
RC3H2-208ENST00000478216 ISCA1Q9BUE6 129 aa18.48■□□□□ 0.55
RC3H2-208ENST00000478216 COL4A1P02462 1669 aa18.47■□□□□ 0.55
RC3H2-208ENST00000478216 VIL1P09327 827 aaKnown RBP18.47■□□□□ 0.55
RC3H2-208ENST00000478216 HSP90B1P14625 803 aaKnown RBP18.47■□□□□ 0.55
RC3H2-208ENST00000478216 SCARF1Q14162 830 aa18.47■□□□□ 0.55
RC3H2-208ENST00000478216 TTLL12Q14166 644 aaPredicted RBP18.47■□□□□ 0.55
RC3H2-208ENST00000478216 REM2Q8IYK8 340 aaPredicted RBP18.47■□□□□ 0.55
RC3H2-208ENST00000478216 POLR2AP24928 1970 aaKnown RBP18.46■□□□□ 0.55
RC3H2-208ENST00000478216 GOLGA2Q08379 1002 aa18.46■□□□□ 0.55
RC3H2-208ENST00000478216 RIC3Q7Z5B4 369 aa18.46■□□□□ 0.55
RC3H2-208ENST00000478216 HYPKQ9NX55 129 aa18.46■□□□□ 0.55
RC3H2-208ENST00000478216 CHL1O00533 1208 aa18.45■□□□□ 0.54
RC3H2-208ENST00000478216 RSBN1LQ6PCB5 846 aaPredicted RBP18.45■□□□□ 0.54
RC3H2-208ENST00000478216 CCDC85AQ96PX6 553 aaPredicted RBP18.45■□□□□ 0.54
RC3H2-208ENST00000478216 SEC31BQ9NQW1 1179 aa18.45■□□□□ 0.54
RC3H2-208ENST00000478216 PAPPA2Q9BXP8 1791 aa18.45■□□□□ 0.54
RC3H2-208ENST00000478216 HOXB7P09629 217 aa18.44■□□□□ 0.54
RC3H2-208ENST00000478216 FKBP1BP68106 108 aa18.44■□□□□ 0.54
RC3H2-208ENST00000478216 CCDC152Q4G0S7 254 aa18.44■□□□□ 0.54
RC3H2-208ENST00000478216 PRPF38BQ5VTL8 546 aaKnown RBP18.44■□□□□ 0.54
RC3H2-208ENST00000478216 AGBL3Q8NEM8 1001 aa18.44■□□□□ 0.54
RC3H2-208ENST00000478216 FBXW7Q969H0 707 aa18.44■□□□□ 0.54
RC3H2-208ENST00000478216 MYOZ2Q9NPC6 264 aa18.44■□□□□ 0.54
RC3H2-208ENST00000478216 HPS5Q9UPZ3 1129 aa18.44■□□□□ 0.54
RC3H2-208ENST00000478216 SCN9AQ15858 1988 aa18.43■□□□□ 0.54
RC3H2-208ENST00000478216 USP17L8P0C7I0 530 aa18.43■□□□□ 0.54
RC3H2-208ENST00000478216 ZNF280AP59817 542 aaPredicted RBP18.43■□□□□ 0.54
RC3H2-208ENST00000478216 WDR43Q15061 677 aaKnown RBP eCLIP18.43■□□□□ 0.54
RC3H2-208ENST00000478216 ZBTB38Q8NAP3 1195 aaPredicted RBP18.43■□□□□ 0.54
RC3H2-208ENST00000478216 PODXL2Q9NZ53 605 aa18.43■□□□□ 0.54
RC3H2-208ENST00000478216 DUSP27Q5VZP5 1158 aa18.42■□□□□ 0.54
RC3H2-208ENST00000478216 SCAF8Q9UPN6 1271 aaKnown RBP18.42■□□□□ 0.54
RC3H2-208ENST00000478216 XDHP47989 1333 aa18.42■□□□□ 0.54
RC3H2-208ENST00000478216 UBE2Q2LH0YL09 131 aa18.41■□□□□ 0.54
RC3H2-208ENST00000478216 TBC1D8O95759 1140 aa18.41■□□□□ 0.54
RC3H2-208ENST00000478216 NF2P35240 595 aa18.41■□□□□ 0.54
RC3H2-208ENST00000478216 MKRN3Q13064 507 aaKnown RBP18.41■□□□□ 0.54
RC3H2-208ENST00000478216 RALBP1Q15311 655 aa18.41■□□□□ 0.54
RC3H2-208ENST00000478216 PKN2Q16513 984 aaKnown RBP18.41■□□□□ 0.54
RC3H2-208ENST00000478216 MOB2Q70IA6 237 aa18.41■□□□□ 0.54
RC3H2-208ENST00000478216 ANKRD18AQ8IVF6 992 aa18.41■□□□□ 0.54
RC3H2-208ENST00000478216 MYD88Q99836 296 aa18.41■□□□□ 0.54
RC3H2-208ENST00000478216 USP17L3A6NCW0 530 aa18.4■□□□□ 0.54
RC3H2-208ENST00000478216 USP17L4A6NCW7 530 aa18.4■□□□□ 0.54
RC3H2-208ENST00000478216 TRIM28Q13263 835 aaKnown RBP18.4■□□□□ 0.54
RC3H2-208ENST00000478216 USP17L1Q7RTZ2 530 aa18.4■□□□□ 0.54
RC3H2-208ENST00000478216 ZNF296Q8WUU4 475 aaPredicted RBP18.4■□□□□ 0.54
RC3H2-208ENST00000478216 RUNDC1Q96C34 613 aa18.4■□□□□ 0.54
RC3H2-208ENST00000478216 PITPNM2Q9BZ72 1349 aa18.4■□□□□ 0.54
RC3H2-208ENST00000478216 PRAMEF18Q5VWM3 479 aa18.39■□□□□ 0.53
RC3H2-208ENST00000478216 OGFOD1Q8N543 542 aa18.39■□□□□ 0.53
RC3H2-208ENST00000478216 JARID2Q92833 1246 aaPredicted RBP18.39■□□□□ 0.53
RC3H2-208ENST00000478216 ZNF609O15014 1411 aa18.39■□□□□ 0.53
RC3H2-208ENST00000478216 PDE4DIPQ5VU43 2346 aa18.38■□□□□ 0.53
RC3H2-208ENST00000478216 PDE8AO60658 829 aa18.38■□□□□ 0.53
RC3H2-208ENST00000478216 ATP2B4P23634 1241 aa18.38■□□□□ 0.53
RC3H2-208ENST00000478216 CWC25Q9NXE8 425 aaPredicted RBP18.38■□□□□ 0.53
RC3H2-208ENST00000478216 TRIM35Q9UPQ4 493 aa18.38■□□□□ 0.53
RC3H2-208ENST00000478216 PODNQ7Z5L7 613 aa18.37■□□□□ 0.53
RC3H2-208ENST00000478216 PHAXQ9H814 394 aaKnown RBP18.37■□□□□ 0.53
RC3H2-208ENST00000478216 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.37■□□□□ 0.53
RC3H2-208ENST00000478216 TNRC18O15417 2968 aaPredicted RBP18.36■□□□□ 0.53
RC3H2-208ENST00000478216 ELL2O00472 640 aaPredicted RBP18.36■□□□□ 0.53
RC3H2-208ENST00000478216 PCCAP05165 728 aaPredicted RBP18.36■□□□□ 0.53
RC3H2-208ENST00000478216 SREBF2Q12772 1141 aa18.36■□□□□ 0.53
RC3H2-208ENST00000478216 PRKG1Q13976 671 aa18.36■□□□□ 0.53
RC3H2-208ENST00000478216 PSME4Q14997 1843 aa18.36■□□□□ 0.53
RC3H2-208ENST00000478216 NBPF9Q3BBW0 867 aa18.36■□□□□ 0.53
RC3H2-208ENST00000478216 CCDC191Q8NCU4 936 aa18.36■□□□□ 0.53
RC3H2-208ENST00000478216 CDC5LQ99459 802 aaKnown RBP18.36■□□□□ 0.53
RC3H2-208ENST00000478216 MBIPQ9NS73 344 aa18.36■□□□□ 0.53
RC3H2-208ENST00000478216 MYBBP1AQ9BQG0 1328 aaKnown RBP18.35■□□□□ 0.53
RC3H2-208ENST00000478216 DDX58O95786 925 aaKnown RBP18.35■□□□□ 0.53
RC3H2-208ENST00000478216 GPR25O00155 361 aa18.34■□□□□ 0.53
RC3H2-208ENST00000478216 SASH1O94885 1247 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 183 ms