RNA–Protein interactions for RNA: ENST00000478172.1

TCAF1-204, Transcript of TRPM8 channel associated factor 1, human

TSL 4

Gene TCAF1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCAF1-204	ENST00000478172	ZNF157	P51786	506 aa	Predicted RBP	13.76	□□□□□ -0.21
TCAF1-204	ENST00000478172	SF3B3	Q15393	1217 aa	Known RBP	13.76	□□□□□ -0.21
TCAF1-204	ENST00000478172	KIF4B	Q2VIQ3	1234 aa		13.76	□□□□□ -0.21
TCAF1-204	ENST00000478172	ISCA1	Q9BUE6	129 aa		13.76	□□□□□ -0.21
TCAF1-204	ENST00000478172	PSME4	Q14997	1843 aa		13.76	□□□□□ -0.21
TCAF1-204	ENST00000478172	SPEF2	Q9C093	1822 aa		13.76	□□□□□ -0.21
TCAF1-204	ENST00000478172	IRS4	O14654	1257 aa	Predicted RBP	13.75	□□□□□ -0.21
TCAF1-204	ENST00000478172	RALBP1	Q15311	655 aa		13.75	□□□□□ -0.21
TCAF1-204	ENST00000478172	GGA3	Q9NZ52	723 aa		13.75	□□□□□ -0.21
TCAF1-204	ENST00000478172	DBF4	Q9UBU7	674 aa	Predicted RBP	13.75	□□□□□ -0.21
TCAF1-204	ENST00000478172	FAM155A	B1AL88	458 aa	Predicted RBP	13.74	□□□□□ -0.21
TCAF1-204	ENST00000478172	UFL1	O94874	794 aa		13.74	□□□□□ -0.21
TCAF1-204	ENST00000478172	RPS8	P62241	208 aa	Known RBP	13.74	□□□□□ -0.21
TCAF1-204	ENST00000478172	KIF23	Q02241	960 aa	Predicted RBP	13.74	□□□□□ -0.21
TCAF1-204	ENST00000478172	WDR43	Q15061	677 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
TCAF1-204	ENST00000478172	SULF1	Q8IWU6	871 aa		13.74	□□□□□ -0.21
TCAF1-204	ENST00000478172	TBC1D16	Q8TBP0	767 aa		13.74	□□□□□ -0.21
TCAF1-204	ENST00000478172	CCDC102A	Q96A19	550 aa		13.74	□□□□□ -0.21
TCAF1-204	ENST00000478172	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.74	□□□□□ -0.21
TCAF1-204	ENST00000478172	HYPK	Q9NX55	129 aa		13.74	□□□□□ -0.21
TCAF1-204	ENST00000478172	ANKIB1	Q9P2G1	1089 aa		13.74	□□□□□ -0.21
TCAF1-204	ENST00000478172	ASTN2	O75129	1339 aa	Predicted RBP	13.73	□□□□□ -0.21
TCAF1-204	ENST00000478172	TRPA1	O75762	1119 aa		13.73	□□□□□ -0.21
TCAF1-204	ENST00000478172	HOXB7	P09629	217 aa		13.73	□□□□□ -0.21
TCAF1-204	ENST00000478172	GOLGA2	Q08379	1002 aa		13.73	□□□□□ -0.21
TCAF1-204	ENST00000478172	RIC3	Q7Z5B4	369 aa		13.73	□□□□□ -0.21
TCAF1-204	ENST00000478172	RUNDC1	Q96C34	613 aa		13.73	□□□□□ -0.21
TCAF1-204	ENST00000478172	SEC31B	Q9NQW1	1179 aa		13.73	□□□□□ -0.21
TCAF1-204	ENST00000478172	TRIM35	Q9UPQ4	493 aa		13.73	□□□□□ -0.21
TCAF1-204	ENST00000478172	TNRC18	O15417	2968 aa	Predicted RBP	13.72	□□□□□ -0.21
TCAF1-204	ENST00000478172	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.72	□□□□□ -0.21
TCAF1-204	ENST00000478172	DUSP27	Q5VZP5	1158 aa		13.72	□□□□□ -0.21
TCAF1-204	ENST00000478172	CDCA5	Q96FF9	252 aa		13.72	□□□□□ -0.21
TCAF1-204	ENST00000478172	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.72	□□□□□ -0.21
TCAF1-204	ENST00000478172	SAGE1	Q9NXZ1	904 aa		13.72	□□□□□ -0.21
TCAF1-204	ENST00000478172	GGA1	Q9UJY5	639 aa		13.72	□□□□□ -0.21
TCAF1-204	ENST00000478172	SLC10A3	P09131	477 aa		13.71	□□□□□ -0.21
TCAF1-204	ENST00000478172	VIL1	P09327	827 aa	Known RBP	13.71	□□□□□ -0.21
TCAF1-204	ENST00000478172	SOX10	P56693	466 aa		13.71	□□□□□ -0.21
TCAF1-204	ENST00000478172	RNF186	Q9NXI6	227 aa		13.71	□□□□□ -0.21
TCAF1-204	ENST00000478172	PAPPA2	Q9BXP8	1791 aa		13.71	□□□□□ -0.22
TCAF1-204	ENST00000478172	MYH3	P11055	1940 aa		13.7	□□□□□ -0.22
TCAF1-204	ENST00000478172	HSP90B1	P14625	803 aa	Known RBP	13.7	□□□□□ -0.22
TCAF1-204	ENST00000478172	CCDC152	Q4G0S7	254 aa		13.7	□□□□□ -0.22
TCAF1-204	ENST00000478172	ANGEL2	Q5VTE6	544 aa	Known RBP	13.7	□□□□□ -0.22
TCAF1-204	ENST00000478172	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.7	□□□□□ -0.22
TCAF1-204	ENST00000478172	JARID2	Q92833	1246 aa	Predicted RBP	13.7	□□□□□ -0.22
TCAF1-204	ENST00000478172	MYD88	Q99836	296 aa		13.7	□□□□□ -0.22
TCAF1-204	ENST00000478172	MBIP	Q9NS73	344 aa		13.7	□□□□□ -0.22
TCAF1-204	ENST00000478172	PDE4DIP	Q5VU43	2346 aa		13.7	□□□□□ -0.22
TCAF1-204	ENST00000478172	TRIM28	Q13263	835 aa	Known RBP	13.69	□□□□□ -0.22
TCAF1-204	ENST00000478172	SCARF1	Q14162	830 aa		13.69	□□□□□ -0.22
TCAF1-204	ENST00000478172	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.69	□□□□□ -0.22
TCAF1-204	ENST00000478172	RASAL3	Q86YV0	1011 aa		13.69	□□□□□ -0.22
TCAF1-204	ENST00000478172	PHAX	Q9H814	394 aa	Known RBP	13.69	□□□□□ -0.22
TCAF1-204	ENST00000478172	PODXL2	Q9NZ53	605 aa		13.69	□□□□□ -0.22
TCAF1-204	ENST00000478172	ELL2	O00472	640 aa	Predicted RBP	13.68	□□□□□ -0.22
TCAF1-204	ENST00000478172	AGBL3	Q8NEM8	1001 aa		13.68	□□□□□ -0.22
TCAF1-204	ENST00000478172	CSRNP1	Q96S65	589 aa		13.68	□□□□□ -0.22
TCAF1-204	ENST00000478172	SCAF8	Q9UPN6	1271 aa	Known RBP	13.68	□□□□□ -0.22
TCAF1-204	ENST00000478172	XDH	P47989	1333 aa		13.67	□□□□□ -0.22
TCAF1-204	ENST00000478172	PDE8A	O60658	829 aa		13.67	□□□□□ -0.22
TCAF1-204	ENST00000478172	ZNF280A	P59817	542 aa	Predicted RBP	13.67	□□□□□ -0.22
TCAF1-204	ENST00000478172	ANKRD18A	Q8IVF6	992 aa		13.67	□□□□□ -0.22
TCAF1-204	ENST00000478172	FBXW7	Q969H0	707 aa		13.67	□□□□□ -0.22
TCAF1-204	ENST00000478172	MYOZ2	Q9NPC6	264 aa		13.67	□□□□□ -0.22
TCAF1-204	ENST00000478172	CWC25	Q9NXE8	425 aa	Predicted RBP	13.67	□□□□□ -0.22
TCAF1-204	ENST00000478172	ADAMTS8	Q9UP79	889 aa		13.67	□□□□□ -0.22
TCAF1-204	ENST00000478172	ZNF609	O15014	1411 aa		13.66	□□□□□ -0.22
TCAF1-204	ENST00000478172	PCCA	P05165	728 aa	Predicted RBP	13.66	□□□□□ -0.22
TCAF1-204	ENST00000478172	USP17L8	P0C7I0	530 aa		13.66	□□□□□ -0.22
TCAF1-204	ENST00000478172	DDX10	Q13206	875 aa	Known RBP	13.66	□□□□□ -0.22
TCAF1-204	ENST00000478172	TTLL12	Q14166	644 aa	Predicted RBP	13.66	□□□□□ -0.22
TCAF1-204	ENST00000478172	CTU1	Q7Z7A3	348 aa	Known RBP	13.66	□□□□□ -0.22
TCAF1-204	ENST00000478172	CCDC191	Q8NCU4	936 aa		13.66	□□□□□ -0.22
TCAF1-204	ENST00000478172	ZNF646	O15015	1829 aa	Predicted RBP	13.66	□□□□□ -0.22
TCAF1-204	ENST00000478172	USP17L3	A6NCW0	530 aa		13.65	□□□□□ -0.22
TCAF1-204	ENST00000478172	USP17L4	A6NCW7	530 aa		13.65	□□□□□ -0.22
TCAF1-204	ENST00000478172	ATP2B4	P23634	1241 aa		13.65	□□□□□ -0.22
TCAF1-204	ENST00000478172	MOB2	Q70IA6	237 aa		13.65	□□□□□ -0.22
TCAF1-204	ENST00000478172	USP17L1	Q7RTZ2	530 aa		13.65	□□□□□ -0.22
TCAF1-204	ENST00000478172	REM2	Q8IYK8	340 aa	Predicted RBP	13.65	□□□□□ -0.22
TCAF1-204	ENST00000478172	PITPNM2	Q9BZ72	1349 aa		13.64	□□□□□ -0.23
TCAF1-204	ENST00000478172	DDX58	O95786	925 aa	Known RBP	13.64	□□□□□ -0.23
TCAF1-204	ENST00000478172	FKBP1B	P68106	108 aa		13.64	□□□□□ -0.23
TCAF1-204	ENST00000478172	PRAMEF18	Q5VWM3	479 aa		13.64	□□□□□ -0.23
TCAF1-204	ENST00000478172	CDC5L	Q99459	802 aa	Known RBP	13.64	□□□□□ -0.23
TCAF1-204	ENST00000478172	HDAC9	Q9UKV0	1011 aa		13.64	□□□□□ -0.23
TCAF1-204	ENST00000478172	UBE2Q2L	H0YL09	131 aa		13.63	□□□□□ -0.23
TCAF1-204	ENST00000478172	CTSW	P56202	376 aa		13.63	□□□□□ -0.23
TCAF1-204	ENST00000478172	GNAI1	P63096	354 aa		13.63	□□□□□ -0.23
TCAF1-204	ENST00000478172	MKRN3	Q13064	507 aa	Known RBP	13.63	□□□□□ -0.23
TCAF1-204	ENST00000478172	PODN	Q7Z5L7	613 aa		13.63	□□□□□ -0.23
TCAF1-204	ENST00000478172	GML	Q99445	158 aa		13.63	□□□□□ -0.23
TCAF1-204	ENST00000478172	METTL22	Q9BUU2	404 aa	Predicted RBP	13.63	□□□□□ -0.23
TCAF1-204	ENST00000478172	MXD3	Q9BW11	206 aa		13.63	□□□□□ -0.23
TCAF1-204	ENST00000478172	IFT57	Q9NWB7	429 aa		13.63	□□□□□ -0.23
TCAF1-204	ENST00000478172	MED23	Q9ULK4	1368 aa		13.62	□□□□□ -0.23
TCAF1-204	ENST00000478172	WTIP	A6NIX2	430 aa	Predicted RBP	13.62	□□□□□ -0.23
TCAF1-204	ENST00000478172	TBC1D8	O95759	1140 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms