RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 FOXO4P98177 505 aa13.06□□□□□ -0.32
LCLAT1-209ENST00000478015 FAM161AQ3B820 660 aa13.06□□□□□ -0.32
LCLAT1-209ENST00000478015 MRPL50Q8N5N7 158 aaKnown RBP13.06□□□□□ -0.32
LCLAT1-209ENST00000478015 KAZALD1Q96I82 304 aa13.06□□□□□ -0.32
LCLAT1-209ENST00000478015 PODXL2Q9NZ53 605 aa13.06□□□□□ -0.32
LCLAT1-209ENST00000478015 SNAP23O00161 211 aa13.06□□□□□ -0.32
LCLAT1-209ENST00000478015 CSF1RP07333 972 aa13.06□□□□□ -0.32
LCLAT1-209ENST00000478015 TMC4Q7Z404 712 aa13.06□□□□□ -0.32
LCLAT1-209ENST00000478015 TXNRD3Q86VQ6 643 aa13.06□□□□□ -0.32
LCLAT1-209ENST00000478015 LDHDQ86WU2 507 aa13.06□□□□□ -0.32
LCLAT1-209ENST00000478015 PLA2G12BQ9BX93 195 aa13.06□□□□□ -0.32
LCLAT1-209ENST00000478015 VPS33BQ9H267 617 aa13.06□□□□□ -0.32
LCLAT1-209ENST00000478015 GPRC5DQ9NZD1 345 aa13.06□□□□□ -0.32
LCLAT1-209ENST00000478015 MINPP1Q9UNW1 487 aa13.06□□□□□ -0.32
LCLAT1-209ENST00000478015 KLRK1P26718 216 aa13.05□□□□□ -0.32
LCLAT1-209ENST00000478015 DLK2Q6UY11 383 aa13.05□□□□□ -0.32
LCLAT1-209ENST00000478015 SUPT20HQ8NEM7 779 aa13.05□□□□□ -0.32
LCLAT1-209ENST00000478015 TMX4Q9H1E5 349 aaPredicted RBP13.05□□□□□ -0.32
LCLAT1-209ENST00000478015 POLR2AP24928 1970 aaKnown RBP13.05□□□□□ -0.32
LCLAT1-209ENST00000478015 E9PSI1 815 aa13.04□□□□□ -0.32
LCLAT1-209ENST00000478015 PSMD14O00487 310 aa13.04□□□□□ -0.32
LCLAT1-209ENST00000478015 UFL1O94874 794 aa13.04□□□□□ -0.32
LCLAT1-209ENST00000478015 ITGA6P23229 1130 aa13.04□□□□□ -0.32
LCLAT1-209ENST00000478015 ANKIB1Q9P2G1 1089 aa13.04□□□□□ -0.32
LCLAT1-209ENST00000478015 ZNF646O15015 1829 aaPredicted RBP13.04□□□□□ -0.32
LCLAT1-209ENST00000478015 NBPF7P0C2Y1 421 aaPredicted RBP13.04□□□□□ -0.32
LCLAT1-209ENST00000478015 CIAPIN1Q6FI81 312 aa13.04□□□□□ -0.32
LCLAT1-209ENST00000478015 SLC4A10Q6U841 1118 aa13.04□□□□□ -0.32
LCLAT1-209ENST00000478015 ANKRD18AQ8IVF6 992 aa13.04□□□□□ -0.32
LCLAT1-209ENST00000478015 TRPM4Q8TD43 1214 aa13.04□□□□□ -0.32
LCLAT1-209ENST00000478015 KLRG1Q96E93 195 aa13.04□□□□□ -0.32
LCLAT1-209ENST00000478015 TRAF5O00463 557 aa13.03□□□□□ -0.32
LCLAT1-209ENST00000478015 ECE2O60344 883 aa13.03□□□□□ -0.32
LCLAT1-209ENST00000478015 CNTROBQ8N137 903 aa13.03□□□□□ -0.32
LCLAT1-209ENST00000478015 BSDC1Q9NW68 430 aaPredicted RBP13.03□□□□□ -0.32
LCLAT1-209ENST00000478015 CLEC11AQ9Y240 323 aa13.03□□□□□ -0.32
LCLAT1-209ENST00000478015 ZNF594Q96JF6 807 aaPredicted RBP13.02□□□□□ -0.32
LCLAT1-209ENST00000478015 GRM8O00222 908 aa13.02□□□□□ -0.33
LCLAT1-209ENST00000478015 DIEXFQ68CQ4 756 aaKnown RBP13.02□□□□□ -0.33
LCLAT1-209ENST00000478015 SAMD7Q7Z3H4 446 aa13.02□□□□□ -0.33
LCLAT1-209ENST00000478015 PNMA8AQ86V59 439 aaPredicted RBP13.02□□□□□ -0.33
LCLAT1-209ENST00000478015 GGA1Q9UJY5 639 aa13.02□□□□□ -0.33
LCLAT1-209ENST00000478015 A0A1B0GUL6 1792 aa13.01□□□□□ -0.33
LCLAT1-209ENST00000478015 LMBR1LQ6UX01 489 aa13.01□□□□□ -0.33
LCLAT1-209ENST00000478015 SUCLG2Q96I99 432 aa13.01□□□□□ -0.33
LCLAT1-209ENST00000478015 MXD3Q9BW11 206 aa13.01□□□□□ -0.33
LCLAT1-209ENST00000478015 CNOT7Q9UIV1 285 aaKnown RBP13.01□□□□□ -0.33
LCLAT1-209ENST00000478015 XDHP47989 1333 aa13.01□□□□□ -0.33
LCLAT1-209ENST00000478015 PSME4Q14997 1843 aa13□□□□□ -0.33
LCLAT1-209ENST00000478015 ASTN2O75129 1339 aaPredicted RBP13□□□□□ -0.33
LCLAT1-209ENST00000478015 IRS2Q9Y4H2 1338 aa13□□□□□ -0.33
LCLAT1-209ENST00000478015 HSP90B1P14625 803 aaKnown RBP13□□□□□ -0.33
LCLAT1-209ENST00000478015 CST9Q5W186 159 aa13□□□□□ -0.33
LCLAT1-209ENST00000478015 MICALL2Q8IY33 904 aa13□□□□□ -0.33
LCLAT1-209ENST00000478015 JMYQ8N9B5 988 aa13□□□□□ -0.33
LCLAT1-209ENST00000478015 HELBQ8NG08 1087 aaPredicted RBP13□□□□□ -0.33
LCLAT1-209ENST00000478015 CDC5LQ99459 802 aaKnown RBP13□□□□□ -0.33
LCLAT1-209ENST00000478015 ZC3H12CQ9C0D7 883 aaKnown RBP13□□□□□ -0.33
LCLAT1-209ENST00000478015 MKRN1Q9UHC7 482 aaKnown RBP13□□□□□ -0.33
LCLAT1-209ENST00000478015 TAF5LO75529 589 aa12.99□□□□□ -0.33
LCLAT1-209ENST00000478015 LMOD1P29536 600 aaPredicted RBP12.99□□□□□ -0.33
LCLAT1-209ENST00000478015 CCT4P50991 539 aaKnown RBP12.99□□□□□ -0.33
LCLAT1-209ENST00000478015 ADARB2Q9NS39 739 aaKnown RBP12.99□□□□□ -0.33
LCLAT1-209ENST00000478015 VIL1P09327 827 aaKnown RBP12.99□□□□□ -0.33
LCLAT1-209ENST00000478015 USP50Q70EL3 339 aaPredicted RBP12.99□□□□□ -0.33
LCLAT1-209ENST00000478015 SRCIN1Q9C0H9 1055 aa12.99□□□□□ -0.33
LCLAT1-209ENST00000478015 CREBZFQ9NS37 354 aa12.99□□□□□ -0.33
LCLAT1-209ENST00000478015 UTYO14607 1347 aa12.98□□□□□ -0.33
LCLAT1-209ENST00000478015 CHRNDQ07001 517 aa12.98□□□□□ -0.33
LCLAT1-209ENST00000478015 TNIP1Q15025 636 aa12.98□□□□□ -0.33
LCLAT1-209ENST00000478015 TBC1D10BQ4KMP7 808 aaPredicted RBP12.98□□□□□ -0.33
LCLAT1-209ENST00000478015 GLIS2Q9BZE0 524 aaPredicted RBP12.98□□□□□ -0.33
LCLAT1-209ENST00000478015 PUS3Q9BZE2 481 aaKnown RBP12.98□□□□□ -0.33
LCLAT1-209ENST00000478015 USP44Q9H0E7 712 aa12.98□□□□□ -0.33
LCLAT1-209ENST00000478015 PGAP2Q9UHJ9 254 aa12.98□□□□□ -0.33
LCLAT1-209ENST00000478015 ALDH1L1O75891 902 aa12.97□□□□□ -0.33
LCLAT1-209ENST00000478015 ANKRD44Q8N8A2 993 aa12.97□□□□□ -0.33
LCLAT1-209ENST00000478015 GMLQ99445 158 aa12.97□□□□□ -0.33
LCLAT1-209ENST00000478015 EYA3Q99504 573 aa12.97□□□□□ -0.33
LCLAT1-209ENST00000478015 C9orf78Q9NZ63 289 aaPredicted RBP12.97□□□□□ -0.33
LCLAT1-209ENST00000478015 TNNQ9UQP3 1299 aa12.97□□□□□ -0.33
LCLAT1-209ENST00000478015 ATP2B4P23634 1241 aa12.97□□□□□ -0.33
LCLAT1-209ENST00000478015 DPF2Q92785 391 aa12.97□□□□□ -0.33
LCLAT1-209ENST00000478015 BICC1Q9H694 974 aaKnown RBP12.97□□□□□ -0.33
LCLAT1-209ENST00000478015 SCAF8Q9UPN6 1271 aaKnown RBP12.97□□□□□ -0.33
LCLAT1-209ENST00000478015 CHMP3Q9Y3E7 222 aa12.97□□□□□ -0.33
LCLAT1-209ENST00000478015 TRPM7Q96QT4 1865 aa12.96□□□□□ -0.33
LCLAT1-209ENST00000478015 IGHMBP2P38935 993 aaKnown RBP12.96□□□□□ -0.33
LCLAT1-209ENST00000478015 RBM26Q5T8P6 1007 aaKnown RBP12.96□□□□□ -0.33
LCLAT1-209ENST00000478015 KLHDC4Q8TBB5 520 aa12.96□□□□□ -0.33
LCLAT1-209ENST00000478015 SMC4Q9NTJ3 1288 aa12.96□□□□□ -0.33
LCLAT1-209ENST00000478015 NOB1Q9ULX3 412 aaKnown RBP12.96□□□□□ -0.33
LCLAT1-209ENST00000478015 MED23Q9ULK4 1368 aa12.96□□□□□ -0.34
LCLAT1-209ENST00000478015 ZNF804BA4D1E1 1349 aa12.96□□□□□ -0.34
LCLAT1-209ENST00000478015 ANKRD18BA2A2Z9 1011 aa12.95□□□□□ -0.34
LCLAT1-209ENST00000478015 TMEM88BA6NKF7 163 aa12.95□□□□□ -0.34
LCLAT1-209ENST00000478015 RARSP54136 660 aaKnown RBP12.95□□□□□ -0.34
LCLAT1-209ENST00000478015 IFIT5Q13325 482 aaKnown RBP12.95□□□□□ -0.34
LCLAT1-209ENST00000478015 MPHOSPH8Q99549 860 aa12.95□□□□□ -0.34
LCLAT1-209ENST00000478015 PTPRCP08575 1304 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms