RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 ARXQ96QS3 562 aa9.59□□□□□ -0.87
VMA21-203ENST00000477649 HAUS7Q99871 368 aa9.59□□□□□ -0.87
VMA21-203ENST00000477649 UTP14AQ9BVJ6 771 aaKnown RBP9.59□□□□□ -0.87
VMA21-203ENST00000477649 CCDC8Q9H0W5 538 aaPredicted RBP9.59□□□□□ -0.87
VMA21-203ENST00000477649 TRMT112Q9UI30 125 aaKnown RBP9.59□□□□□ -0.87
VMA21-203ENST00000477649 RTL9Q8NET4 1388 aa9.59□□□□□ -0.87
VMA21-203ENST00000477649 ATRNO75882 1429 aa9.58□□□□□ -0.88
VMA21-203ENST00000477649 IRS4O14654 1257 aaPredicted RBP9.58□□□□□ -0.88
VMA21-203ENST00000477649 PTMSP20962 102 aa9.58□□□□□ -0.88
VMA21-203ENST00000477649 HLFQ16534 295 aa9.58□□□□□ -0.88
VMA21-203ENST00000477649 CCDC158Q5M9N0 1113 aa9.58□□□□□ -0.88
VMA21-203ENST00000477649 RNF20Q5VTR2 975 aa9.58□□□□□ -0.88
VMA21-203ENST00000477649 POTEAQ6S8J7 498 aa9.58□□□□□ -0.88
VMA21-203ENST00000477649 TTLL11Q8NHH1 800 aa9.58□□□□□ -0.88
VMA21-203ENST00000477649 ACSBG1Q96GR2 724 aa9.58□□□□□ -0.88
VMA21-203ENST00000477649 ZNF512BQ96KM6 892 aaPredicted RBP9.58□□□□□ -0.88
VMA21-203ENST00000477649 DBNLQ9UJU6 430 aaKnown RBP9.58□□□□□ -0.88
VMA21-203ENST00000477649 ANKRD36CQ5JPF3 1778 aa9.58□□□□□ -0.88
VMA21-203ENST00000477649 CAMTA2O94983 1202 aa9.57□□□□□ -0.88
VMA21-203ENST00000477649 ZKSCAN1P17029 563 aaPredicted RBP9.57□□□□□ -0.88
VMA21-203ENST00000477649 ITPK1Q13572 414 aa9.57□□□□□ -0.88
VMA21-203ENST00000477649 KLHDC4Q8TBB5 520 aa9.57□□□□□ -0.88
VMA21-203ENST00000477649 KCNB2Q92953 911 aa9.57□□□□□ -0.88
VMA21-203ENST00000477649 FAM89AQ96GI7 184 aa9.57□□□□□ -0.88
VMA21-203ENST00000477649 FSD1Q9BTV5 496 aa9.57□□□□□ -0.88
VMA21-203ENST00000477649 TM6SF1Q9BZW5 370 aa9.57□□□□□ -0.88
VMA21-203ENST00000477649 HMG20BQ9P0W2 317 aa9.57□□□□□ -0.88
VMA21-203ENST00000477649 MROH5Q6ZUA9 1318 aa9.56□□□□□ -0.88
VMA21-203ENST00000477649 ZNF609O15014 1411 aa9.56□□□□□ -0.88
VMA21-203ENST00000477649 A0A0G2JS52 829 aa9.56□□□□□ -0.88
VMA21-203ENST00000477649 RPS6KA4O75676 772 aa9.56□□□□□ -0.88
VMA21-203ENST00000477649 ZFYP08048 801 aaPredicted RBP9.56□□□□□ -0.88
VMA21-203ENST00000477649 NUCB2P80303 420 aa9.56□□□□□ -0.88
VMA21-203ENST00000477649 CCDC152Q4G0S7 254 aa9.56□□□□□ -0.88
VMA21-203ENST00000477649 CWC27Q6UX04 472 aaKnown RBP9.56□□□□□ -0.88
VMA21-203ENST00000477649 LDHAL6AQ6ZMR3 332 aa9.56□□□□□ -0.88
VMA21-203ENST00000477649 KBTBD3Q8NAB2 608 aa9.56□□□□□ -0.88
VMA21-203ENST00000477649 JARID2Q92833 1246 aaPredicted RBP9.56□□□□□ -0.88
VMA21-203ENST00000477649 NYXQ9GZU5 481 aa9.56□□□□□ -0.88
VMA21-203ENST00000477649 LSG1Q9H089 658 aaKnown RBP9.56□□□□□ -0.88
VMA21-203ENST00000477649 BOLA2Q9H3K6 86 aa9.56□□□□□ -0.88
VMA21-203ENST00000477649 TBC1D2BQ9UPU7 963 aa9.56□□□□□ -0.88
VMA21-203ENST00000477649 SPEF2Q9C093 1822 aa9.56□□□□□ -0.88
VMA21-203ENST00000477649 AFF2P51816 1311 aa9.56□□□□□ -0.88
VMA21-203ENST00000477649 NHSQ6T4R5 1651 aa9.55□□□□□ -0.88
VMA21-203ENST00000477649 A0A1B0GUL7 405 aa9.55□□□□□ -0.88
VMA21-203ENST00000477649 POTEB3A0JP26 581 aa9.55□□□□□ -0.88
VMA21-203ENST00000477649 SPDYE4A6NLX3 237 aa9.55□□□□□ -0.88
VMA21-203ENST00000477649 PDIA4P13667 645 aaKnown RBP9.55□□□□□ -0.88
VMA21-203ENST00000477649 ITGA6P23229 1130 aa9.55□□□□□ -0.88
VMA21-203ENST00000477649 GPTP24298 496 aa9.55□□□□□ -0.88
VMA21-203ENST00000477649 PSMA5P28066 241 aa9.55□□□□□ -0.88
VMA21-203ENST00000477649 DDIT3P35638 169 aa9.55□□□□□ -0.88
VMA21-203ENST00000477649 KRT32Q14532 448 aa9.55□□□□□ -0.88
VMA21-203ENST00000477649 NFKBIBQ15653 356 aa9.55□□□□□ -0.88
VMA21-203ENST00000477649 GORABQ5T7V8 394 aa9.55□□□□□ -0.88
VMA21-203ENST00000477649 POTEBQ6S5H4 581 aa9.55□□□□□ -0.88
VMA21-203ENST00000477649 INTS4Q96HW7 963 aaKnown RBP9.55□□□□□ -0.88
VMA21-203ENST00000477649 NEUROD6Q96NK8 337 aa9.55□□□□□ -0.88
VMA21-203ENST00000477649 DBNDD2Q9BQY9 259 aa9.55□□□□□ -0.88
VMA21-203ENST00000477649 HELLSQ9NRZ9 838 aa9.55□□□□□ -0.88
VMA21-203ENST00000477649 RIPOR2Q9Y4F9 1068 aa9.55□□□□□ -0.88
VMA21-203ENST00000477649 CCDC171Q6TFL3 1326 aa9.55□□□□□ -0.88
VMA21-203ENST00000477649 UBN2Q6ZU65 1347 aa9.55□□□□□ -0.88
VMA21-203ENST00000477649 MED23Q9ULK4 1368 aa9.54□□□□□ -0.88
VMA21-203ENST00000477649 KCNQ2O43526 872 aa9.54□□□□□ -0.88
VMA21-203ENST00000477649 MAP4K4O95819 1239 aaPredicted RBP9.54□□□□□ -0.88
VMA21-203ENST00000477649 UQCRFS1P1P0C7P4 283 aa9.54□□□□□ -0.88
VMA21-203ENST00000477649 NEK4P51957 841 aa9.54□□□□□ -0.88
VMA21-203ENST00000477649 TTF1Q15361 905 aaPredicted RBP9.54□□□□□ -0.88
VMA21-203ENST00000477649 TSGA10IPQ3SY00 556 aa9.54□□□□□ -0.88
VMA21-203ENST00000477649 LRRC24Q50LG9 513 aa9.54□□□□□ -0.88
VMA21-203ENST00000477649 METTL24Q5JXM2 366 aa9.54□□□□□ -0.88
VMA21-203ENST00000477649 SLC10A5Q5PT55 438 aa9.54□□□□□ -0.88
VMA21-203ENST00000477649 SUSD4Q5VX71 490 aa9.54□□□□□ -0.88
VMA21-203ENST00000477649 ZSCAN25Q6NSZ9 544 aa9.54□□□□□ -0.88
VMA21-203ENST00000477649 MAP4K1Q92918 833 aa9.54□□□□□ -0.88
VMA21-203ENST00000477649 GBP4Q96PP9 640 aa9.54□□□□□ -0.88
VMA21-203ENST00000477649 CDC5LQ99459 802 aaKnown RBP9.54□□□□□ -0.88
VMA21-203ENST00000477649 BCL11BQ9C0K0 894 aaPredicted RBP9.54□□□□□ -0.88
VMA21-203ENST00000477649 SLKQ9H2G2 1235 aaPredicted RBP9.54□□□□□ -0.88
VMA21-203ENST00000477649 CNNM1Q9NRU3 951 aa9.54□□□□□ -0.88
VMA21-203ENST00000477649 PAG1Q9NWQ8 432 aa9.54□□□□□ -0.88
VMA21-203ENST00000477649 TLR7Q9NYK1 1049 aaKnown RBP9.54□□□□□ -0.88
VMA21-203ENST00000477649 NARFQ9UHQ1 456 aa9.54□□□□□ -0.88
VMA21-203ENST00000477649 NIP7Q9Y221 180 aaKnown RBP eCLIP9.54□□□□□ -0.88
VMA21-203ENST00000477649 COL5A3P25940 1745 aaPredicted RBP9.53□□□□□ -0.88
VMA21-203ENST00000477649 AK9Q5TCS8 1911 aa9.53□□□□□ -0.88
VMA21-203ENST00000477649 IGSF3O75054 1194 aa9.53□□□□□ -0.88
VMA21-203ENST00000477649 PDE8BO95263 885 aa9.53□□□□□ -0.88
VMA21-203ENST00000477649 NTSR2O95665 410 aa9.53□□□□□ -0.88
VMA21-203ENST00000477649 IFIT1P09914 478 aaKnown RBP9.53□□□□□ -0.88
VMA21-203ENST00000477649 PLCG2P16885 1265 aa9.53□□□□□ -0.88
VMA21-203ENST00000477649 SSFA2P28290 1259 aa9.53□□□□□ -0.88
VMA21-203ENST00000477649 IGHMBP2P38935 993 aaKnown RBP9.53□□□□□ -0.88
VMA21-203ENST00000477649 EMP3P54852 163 aa9.53□□□□□ -0.88
VMA21-203ENST00000477649 SF3B3Q15393 1217 aaKnown RBP9.53□□□□□ -0.88
VMA21-203ENST00000477649 PUM3Q15397 648 aaKnown RBP9.53□□□□□ -0.88
VMA21-203ENST00000477649 ATP2B3Q16720 1220 aa9.53□□□□□ -0.88
VMA21-203ENST00000477649 MCMDC2Q4G0Z9 681 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms