RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 BSDC1Q9NW68 430 aaPredicted RBP20.06■□□□□ 0.8
VHL-203ENST00000477538 FER1L6Q2WGJ9 1857 aa20.05■□□□□ 0.8
VHL-203ENST00000477538 PPEF1O14829 653 aaPredicted RBP20.05■□□□□ 0.8
VHL-203ENST00000477538 PRPF40BQ6NWY9 871 aaKnown RBP20.05■□□□□ 0.8
VHL-203ENST00000477538 ATG9AQ7Z3C6 839 aa20.05■□□□□ 0.8
VHL-203ENST00000477538 TMC4Q7Z404 712 aa20.05■□□□□ 0.8
VHL-203ENST00000477538 GCC1Q96CN9 775 aa20.05■□□□□ 0.8
VHL-203ENST00000477538 CCDC88AQ3V6T2 1871 aa20.05■□□□□ 0.8
VHL-203ENST00000477538 IL15P40933 162 aaPredicted RBP20.04■□□□□ 0.8
VHL-203ENST00000477538 TTLL6Q8N841 843 aa20.04■□□□□ 0.8
VHL-203ENST00000477538 PIM2Q9P1W9 311 aa20.04■□□□□ 0.8
VHL-203ENST00000477538 RIPOR2Q9Y4F9 1068 aa20.04■□□□□ 0.8
VHL-203ENST00000477538 MYH13Q9UKX3 1938 aa20.04■□□□□ 0.8
VHL-203ENST00000477538 APBB1O00213 710 aa20.03■□□□□ 0.8
VHL-203ENST00000477538 ERC1Q8IUD2 1116 aa20.03■□□□□ 0.8
VHL-203ENST00000477538 SMC5Q8IY18 1101 aa20.03■□□□□ 0.8
VHL-203ENST00000477538 KDM2BQ8NHM5 1336 aa20.02■□□□□ 0.8
VHL-203ENST00000477538 RAB11FIP3O75154 756 aa20.02■□□□□ 0.8
VHL-203ENST00000477538 SYT17Q9BSW7 474 aa20.02■□□□□ 0.8
VHL-203ENST00000477538 MROH5Q6ZUA9 1318 aa20.02■□□□□ 0.79
VHL-203ENST00000477538 METTL24Q5JXM2 366 aa20.01■□□□□ 0.79
VHL-203ENST00000477538 CENPQQ7L2Z9 268 aaPredicted RBP20.01■□□□□ 0.79
VHL-203ENST00000477538 SP8Q8IXZ3 490 aa20.01■□□□□ 0.79
VHL-203ENST00000477538 MINPP1Q9UNW1 487 aa20.01■□□□□ 0.79
VHL-203ENST00000477538 ATP6V0A2Q9Y487 856 aa20.01■□□□□ 0.79
VHL-203ENST00000477538 SASH1O94885 1247 aa20■□□□□ 0.79
VHL-203ENST00000477538 CHRNDQ07001 517 aa20■□□□□ 0.79
VHL-203ENST00000477538 DALRD3Q5D0E6 543 aaKnown RBP20■□□□□ 0.79
VHL-203ENST00000477538 SLC51AQ86UW1 340 aa20■□□□□ 0.79
VHL-203ENST00000477538 RHPN1Q8TCX5 695 aa20■□□□□ 0.79
VHL-203ENST00000477538 KIF1BPQ96EK5 621 aa20■□□□□ 0.79
VHL-203ENST00000477538 WWC3Q9ULE0 1092 aa20■□□□□ 0.79
VHL-203ENST00000477538 CHD4Q14839 1912 aa20■□□□□ 0.79
VHL-203ENST00000477538 TFCP2Q12800 502 aa19.99■□□□□ 0.79
VHL-203ENST00000477538 HELBQ8NG08 1087 aaPredicted RBP19.99■□□□□ 0.79
VHL-203ENST00000477538 LRRCC1Q9C099 1032 aa19.99■□□□□ 0.79
VHL-203ENST00000477538 ANKRD2Q9GZV1 360 aa19.99■□□□□ 0.79
VHL-203ENST00000477538 TMX4Q9H1E5 349 aaPredicted RBP19.99■□□□□ 0.79
VHL-203ENST00000477538 CEP126Q9P2H0 1117 aa19.99■□□□□ 0.79
VHL-203ENST00000477538 ZNF219Q9P2Y4 722 aaPredicted RBP19.99■□□□□ 0.79
VHL-203ENST00000477538 VGLL2Q8N8G2 317 aa19.98■□□□□ 0.79
VHL-203ENST00000477538 C7orf43Q8WVR3 580 aa19.98■□□□□ 0.79
VHL-203ENST00000477538 DUOX1Q9NRD9 1551 aa19.98■□□□□ 0.79
VHL-203ENST00000477538 ZNF609O15014 1411 aa19.97■□□□□ 0.79
VHL-203ENST00000477538 TAF5LO75529 589 aa19.97■□□□□ 0.79
VHL-203ENST00000477538 ANKRD45Q5TZF3 282 aa19.97■□□□□ 0.79
VHL-203ENST00000477538 OLFM4Q6UX06 510 aa19.97■□□□□ 0.79
VHL-203ENST00000477538 ANKIB1Q9P2G1 1089 aa19.97■□□□□ 0.79
VHL-203ENST00000477538 ZBTB47Q9UFB7 747 aaPredicted RBP19.97■□□□□ 0.79
VHL-203ENST00000477538 BCS1LQ9Y276 419 aa19.97■□□□□ 0.79
VHL-203ENST00000477538 XDHP47989 1333 aa19.97■□□□□ 0.79
VHL-203ENST00000477538 SBF1O95248 1867 aa19.96■□□□□ 0.79
VHL-203ENST00000477538 C21orf2O43822 256 aa19.96■□□□□ 0.79
VHL-203ENST00000477538 SMARCA5O60264 1052 aaPredicted RBP19.96■□□□□ 0.79
VHL-203ENST00000477538 PDE8BO95263 885 aa19.96■□□□□ 0.79
VHL-203ENST00000477538 GPSM2P81274 684 aa19.96■□□□□ 0.79
VHL-203ENST00000477538 CC2D2BQ6DHV5 1058 aa19.96■□□□□ 0.79
VHL-203ENST00000477538 IL1RAPL2Q9NP60 686 aa19.96■□□□□ 0.79
VHL-203ENST00000477538 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.96■□□□□ 0.79
VHL-203ENST00000477538 BCL11AQ9H165 835 aa19.95■□□□□ 0.78
VHL-203ENST00000477538 NSFL1CQ9UNZ2 370 aaKnown RBP19.95■□□□□ 0.78
VHL-203ENST00000477538 DICER1Q9UPY3 1922 aaKnown RBP19.95■□□□□ 0.78
VHL-203ENST00000477538 SNED1Q8TER0 1413 aa19.94■□□□□ 0.78
VHL-203ENST00000477538 NUCB1Q02818 461 aa19.94■□□□□ 0.78
VHL-203ENST00000477538 PUM3Q15397 648 aaKnown RBP19.94■□□□□ 0.78
VHL-203ENST00000477538 CCDC93Q567U6 631 aa19.94■□□□□ 0.78
VHL-203ENST00000477538 SOGA3Q5TF21 947 aa19.94■□□□□ 0.78
VHL-203ENST00000477538 CLASRPQ8N2M8 674 aaKnown RBP19.94■□□□□ 0.78
VHL-203ENST00000477538 MPNDQ8N594 471 aa19.94■□□□□ 0.78
VHL-203ENST00000477538 GPR108Q9NPR9 543 aa19.94■□□□□ 0.78
VHL-203ENST00000477538 PODXL2Q9NZ53 605 aa19.94■□□□□ 0.78
VHL-203ENST00000477538 AKAP2Q9Y2D5 859 aa19.94■□□□□ 0.78
VHL-203ENST00000477538 AK9Q5TCS8 1911 aa19.94■□□□□ 0.78
VHL-203ENST00000477538 KCNJ4P48050 445 aa19.93■□□□□ 0.78
VHL-203ENST00000477538 ATP2B3Q16720 1220 aa19.93■□□□□ 0.78
VHL-203ENST00000477538 TNNI3KQ59H18 835 aa19.93■□□□□ 0.78
VHL-203ENST00000477538 CHD1LQ86WJ1 897 aa19.93■□□□□ 0.78
VHL-203ENST00000477538 LEMD3Q9Y2U8 911 aa19.93■□□□□ 0.78
VHL-203ENST00000477538 FPGT-TNNI3KV9GXZ4 949 aa19.93■□□□□ 0.78
VHL-203ENST00000477538 SNAP23O00161 211 aa19.92■□□□□ 0.78
VHL-203ENST00000477538 UFL1O94874 794 aa19.92■□□□□ 0.78
VHL-203ENST00000477538 FGFR2P21802 821 aa19.92■□□□□ 0.78
VHL-203ENST00000477538 ATP2B4P23634 1241 aa19.92■□□□□ 0.78
VHL-203ENST00000477538 UBE4AQ14139 1066 aa19.92■□□□□ 0.78
VHL-203ENST00000477538 GRIPAP1Q4V328 841 aa19.92■□□□□ 0.78
VHL-203ENST00000477538 DPP8Q6V1X1 898 aaPredicted RBP19.92■□□□□ 0.78
VHL-203ENST00000477538 LNPKQ9C0E8 428 aa19.92■□□□□ 0.78
VHL-203ENST00000477538 GGA1Q9UJY5 639 aa19.92■□□□□ 0.78
VHL-203ENST00000477538 ZNF804BA4D1E1 1349 aa19.92■□□□□ 0.78
VHL-203ENST00000477538 AKAP11Q9UKA4 1901 aa19.92■□□□□ 0.78
VHL-203ENST00000477538 A0A1B0GUL7 405 aa19.91■□□□□ 0.78
VHL-203ENST00000477538 SLC5A1P13866 664 aa19.91■□□□□ 0.78
VHL-203ENST00000477538 AACSQ86V21 672 aa19.91■□□□□ 0.78
VHL-203ENST00000477538 RTKN2Q8IZC4 609 aa19.91■□□□□ 0.78
VHL-203ENST00000477538 LPIN2Q92539 896 aa19.91■□□□□ 0.78
VHL-203ENST00000477538 EAF2Q96CJ1 260 aaPredicted RBP19.91■□□□□ 0.78
VHL-203ENST00000477538 WTIPA6NIX2 430 aaPredicted RBP19.9■□□□□ 0.78
VHL-203ENST00000477538 C6orf229H3BNL8 230 aa19.9■□□□□ 0.78
VHL-203ENST00000477538 IFIT1P09914 478 aaKnown RBP19.9■□□□□ 0.78
VHL-203ENST00000477538 TIMM10P62072 90 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms