RNA–Protein interactions for RNA: ENST00000477438.1

PARVB-206, Transcript of parvin beta, humanhuman

TSL 5

Gene PARVB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-206ENST00000477438 SUCLG2Q96I99 432 aa13.23□□□□□ -0.29
PARVB-206ENST00000477438 UPF2Q9HAU5 1272 aaKnown RBP13.23□□□□□ -0.29
PARVB-206ENST00000477438 UTYO14607 1347 aa13.22□□□□□ -0.29
PARVB-206ENST00000477438 ZBTB7BO15156 539 aaPredicted RBP13.22□□□□□ -0.29
PARVB-206ENST00000477438 SP8Q8IXZ3 490 aa13.22□□□□□ -0.29
PARVB-206ENST00000477438 MPNDQ8N594 471 aa13.22□□□□□ -0.29
PARVB-206ENST00000477438 CELF1Q92879 486 aaKnown RBP13.22□□□□□ -0.29
PARVB-206ENST00000477438 BICC1Q9H694 974 aaKnown RBP13.22□□□□□ -0.29
PARVB-206ENST00000477438 SEC31BQ9NQW1 1179 aa13.22□□□□□ -0.29
PARVB-206ENST00000477438 CNNM1Q9NRU3 951 aa13.22□□□□□ -0.29
PARVB-206ENST00000477438 TNNQ9UQP3 1299 aa13.22□□□□□ -0.29
PARVB-206ENST00000477438 SPEF2Q9C093 1822 aa13.21□□□□□ -0.29
PARVB-206ENST00000477438 GNAI2P04899 355 aa13.21□□□□□ -0.29
PARVB-206ENST00000477438 CASP7P55210 303 aa13.21□□□□□ -0.29
PARVB-206ENST00000477438 C9orf131Q5VYM1 1079 aa13.21□□□□□ -0.29
PARVB-206ENST00000477438 EYA3Q99504 573 aa13.21□□□□□ -0.29
PARVB-206ENST00000477438 USP44Q9H0E7 712 aa13.21□□□□□ -0.29
PARVB-206ENST00000477438 CHD4Q14839 1912 aa13.21□□□□□ -0.3
PARVB-206ENST00000477438 LTBP3Q9NS15 1303 aa13.2□□□□□ -0.3
PARVB-206ENST00000477438 C6orf229H3BNL8 230 aa13.2□□□□□ -0.3
PARVB-206ENST00000477438 FOXO4P98177 505 aa13.2□□□□□ -0.3
PARVB-206ENST00000477438 JDP2Q8WYK2 163 aa13.2□□□□□ -0.3
PARVB-206ENST00000477438 PSMD1Q99460 953 aa13.2□□□□□ -0.3
PARVB-206ENST00000477438 MEIS3Q99687 375 aa13.2□□□□□ -0.3
PARVB-206ENST00000477438 ZNF277Q9NRM2 450 aaPredicted RBP13.2□□□□□ -0.3
PARVB-206ENST00000477438 GGA1Q9UJY5 639 aa13.2□□□□□ -0.3
PARVB-206ENST00000477438 NSFL1CQ9UNZ2 370 aaKnown RBP13.2□□□□□ -0.3
PARVB-206ENST00000477438 LRRFIP2Q9Y608 721 aaKnown RBP13.2□□□□□ -0.3
PARVB-206ENST00000477438 XDHP47989 1333 aa13.19□□□□□ -0.3
PARVB-206ENST00000477438 NFKBIEO00221 500 aa13.19□□□□□ -0.3
PARVB-206ENST00000477438 PPIP5K2O43314 1243 aa13.19□□□□□ -0.3
PARVB-206ENST00000477438 UFL1O94874 794 aa13.19□□□□□ -0.3
PARVB-206ENST00000477438 CSF1RP07333 972 aa13.19□□□□□ -0.3
PARVB-206ENST00000477438 OLFM4Q6UX06 510 aa13.19□□□□□ -0.3
PARVB-206ENST00000477438 NIM1KQ8IY84 436 aa13.19□□□□□ -0.3
PARVB-206ENST00000477438 LARGE2Q8N3Y3 721 aa13.19□□□□□ -0.3
PARVB-206ENST00000477438 ANKRD2Q9GZV1 360 aa13.19□□□□□ -0.3
PARVB-206ENST00000477438 BSDC1Q9NW68 430 aaPredicted RBP13.19□□□□□ -0.3
PARVB-206ENST00000477438 UTRNP46939 3433 aa13.18□□□□□ -0.3
PARVB-206ENST00000477438 IARSP41252 1262 aaKnown RBP13.18□□□□□ -0.3
PARVB-206ENST00000477438 LDHAL6AQ6ZMR3 332 aa13.18□□□□□ -0.3
PARVB-206ENST00000477438 C7orf43Q8WVR3 580 aa13.18□□□□□ -0.3
PARVB-206ENST00000477438 LRRC37AA6NMS7 1700 aa13.18□□□□□ -0.3
PARVB-206ENST00000477438 TIAM2Q8IVF5 1701 aa13.18□□□□□ -0.3
PARVB-206ENST00000477438 FER1L6Q2WGJ9 1857 aa13.18□□□□□ -0.3
PARVB-206ENST00000477438 ZC3H4Q9UPT8 1303 aaKnown RBP13.17□□□□□ -0.3
PARVB-206ENST00000477438 SRGAP3O43295 1099 aa13.17□□□□□ -0.3
PARVB-206ENST00000477438 GPSM2P81274 684 aa13.17□□□□□ -0.3
PARVB-206ENST00000477438 NUCB1Q02818 461 aa13.17□□□□□ -0.3
PARVB-206ENST00000477438 BECN1Q14457 450 aa13.17□□□□□ -0.3
PARVB-206ENST00000477438 EPHA10Q5JZY3 1008 aa13.17□□□□□ -0.3
PARVB-206ENST00000477438 RPAP2Q8IXW5 612 aaPredicted RBP13.17□□□□□ -0.3
PARVB-206ENST00000477438 ATP2B4P23634 1241 aa13.16□□□□□ -0.3
PARVB-206ENST00000477438 EIF6P56537 245 aaKnown RBP13.16□□□□□ -0.3
PARVB-206ENST00000477438 OS9Q13438 667 aaPredicted RBP13.16□□□□□ -0.3
PARVB-206ENST00000477438 WASHC4Q2M389 1173 aa13.16□□□□□ -0.3
PARVB-206ENST00000477438 RABL6Q3YEC7 729 aaPredicted RBP13.16□□□□□ -0.3
PARVB-206ENST00000477438 METTL24Q5JXM2 366 aa13.16□□□□□ -0.3
PARVB-206ENST00000477438 DPY19L2Q6NUT2 758 aa13.16□□□□□ -0.3
PARVB-206ENST00000477438 ANKRD44Q8N8A2 993 aa13.16□□□□□ -0.3
PARVB-206ENST00000477438 ZC3H12CQ9C0D7 883 aaKnown RBP13.16□□□□□ -0.3
PARVB-206ENST00000477438 VPS33BQ9H267 617 aa13.16□□□□□ -0.3
PARVB-206ENST00000477438 TAF1P21675 1872 aa13.16□□□□□ -0.3
PARVB-206ENST00000477438 MROH5Q6ZUA9 1318 aa13.15□□□□□ -0.3
PARVB-206ENST00000477438 AOC3Q16853 763 aa13.15□□□□□ -0.3
PARVB-206ENST00000477438 SKAP1Q86WV1 359 aa13.15□□□□□ -0.3
PARVB-206ENST00000477438 ZNF526Q8TF50 670 aaPredicted RBP13.15□□□□□ -0.3
PARVB-206ENST00000477438 ZNF594Q96JF6 807 aaPredicted RBP13.15□□□□□ -0.3
PARVB-206ENST00000477438 RIMBP2O15034 1052 aa13.14□□□□□ -0.31
PARVB-206ENST00000477438 CHRNDQ07001 517 aa13.14□□□□□ -0.31
PARVB-206ENST00000477438 CHD1LQ86WJ1 897 aa13.14□□□□□ -0.31
PARVB-206ENST00000477438 TBC1D16Q8TBP0 767 aa13.14□□□□□ -0.31
PARVB-206ENST00000477438 SIL1Q9H173 461 aa13.14□□□□□ -0.31
PARVB-206ENST00000477438 C1orf115Q9H7X2 142 aa13.14□□□□□ -0.31
PARVB-206ENST00000477438 MINPP1Q9UNW1 487 aa13.14□□□□□ -0.31
PARVB-206ENST00000477438 HMMRO75330 724 aa13.13□□□□□ -0.31
PARVB-206ENST00000477438 KAZALD1Q96I82 304 aa13.13□□□□□ -0.31
PARVB-206ENST00000477438 RTFDC1Q9BY42 306 aaPredicted RBP13.13□□□□□ -0.31
PARVB-206ENST00000477438 GPBP1L1Q9HC44 474 aaPredicted RBP13.13□□□□□ -0.31
PARVB-206ENST00000477438 PODXL2Q9NZ53 605 aa13.13□□□□□ -0.31
PARVB-206ENST00000477438 LEMD3Q9Y2U8 911 aa13.13□□□□□ -0.31
PARVB-206ENST00000477438 ZNF804BA4D1E1 1349 aa13.13□□□□□ -0.31
PARVB-206ENST00000477438 KIAA2012Q0VF49 1180 aa13.12□□□□□ -0.31
PARVB-206ENST00000477438 G3BP1Q13283 466 aaKnown RBP eCLIP13.12□□□□□ -0.31
PARVB-206ENST00000477438 ZNF804AQ7Z570 1209 aa13.12□□□□□ -0.31
PARVB-206ENST00000477438 VPS37DQ86XT2 251 aa13.12□□□□□ -0.31
PARVB-206ENST00000477438 C16orf71Q8IYS4 520 aaPredicted RBP13.12□□□□□ -0.31
PARVB-206ENST00000477438 FBXW7Q969H0 707 aa13.12□□□□□ -0.31
PARVB-206ENST00000477438 MED23Q9ULK4 1368 aa13.11□□□□□ -0.31
PARVB-206ENST00000477438 SBF1O95248 1867 aa13.11□□□□□ -0.31
PARVB-206ENST00000477438 CCDC88AQ3V6T2 1871 aa13.11□□□□□ -0.31
PARVB-206ENST00000477438 TNIP1Q15025 636 aa13.11□□□□□ -0.31
PARVB-206ENST00000477438 SLC51AQ86UW1 340 aa13.11□□□□□ -0.31
PARVB-206ENST00000477438 HELBQ8NG08 1087 aaPredicted RBP13.11□□□□□ -0.31
PARVB-206ENST00000477438 KLHDC4Q8TBB5 520 aa13.11□□□□□ -0.31
PARVB-206ENST00000477438 POLLQ9UGP5 575 aa13.11□□□□□ -0.31
PARVB-206ENST00000477438 FBXO3Q9UK99 471 aa13.11□□□□□ -0.31
PARVB-206ENST00000477438 GJA3Q9Y6H8 435 aa13.11□□□□□ -0.31
PARVB-206ENST00000477438 COL4A1P02462 1669 aa13.11□□□□□ -0.31
PARVB-206ENST00000477438 DICER1Q9UPY3 1922 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms